Conserved Protein Domain Family
seadorna_VP11
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TIGR04230: seadorna_VP11 
seadornavirus VP11 protein
This protein family occurs in the seadornavirus virus group, with designations VP11 in Banna virus, and VP12 in Kadipiro virus and Liao ning virus. The function has not been assigned.
Links
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Statistics
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PSSM-Id: 275070
Aligned: 3 rows
Threshold Bit Score: 221.352
Created: 9-Oct-2014
Updated: 11-Oct-2014
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ACH96361    9 ISAVSASGCKNDKPFCVHKVVAVIVIIVSSGITVVNQIGQKKLSTDD-YFVLSLVCDAISNIIVVGLSVVGMTASSKTKQ 87  Kadipiro virus
YP_460037   9 VATFTGSGCSNRHPFCLHRIVAITVVIITVSIGLVDQLSEKLASTDQ-KHSISLICDGLNSMIIMIMAIIGMTSPGKKTY 87  Liao ning virus
ACA50120    6 TIQVQNLNCCPGRFVCVHKMALLIILIISAAVTVIDQLYQKLPYDEQtKYIVSTITDGINATIISIMAIFGLNNLNRVRY 85  Banna virus

ACH96361   88 Vltd-ggeNAIELNHMPkrivkkLLKDenrNGAEFVKSIGKDL-KNNDSKPDPSAPPKYEKIDESFDLKSEFAGKSLITD 165 Kadipiro virus
YP_460037  88 A-------HEHHEATAP------MLGD---TEYVYVKNNNSDL-PNTGDIVKPNQLNGEAKFGVNQTYPQVVSGEYIITQ 150 Liao ning virus
ACA50120   86 SkldengvYSQEMVTMN------VQSDaanNETKLKKKQNKDTdEEKGLYPNLKLTEPTAPMIHNYMYDHKTQQAYLLTE 159 Banna virus

ACH96361  166 NRTGQSFIVTTDL-VKPLILESRS 188 Kadipiro virus
YP_460037 151 IPDDPNRIKIINInTGSEKIVTKD 174 Liao ning virus
ACA50120  160 HQIEQIKQNSVDPnNTP-KIEVRS 182 Banna virus
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