Conserved Protein Domain Family
halo_surf_glyco

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TIGR04216: halo_surf_glyco 
major cell surface glycoprotein
Members of this family are the S-layer-forming halobacterial major cell surface glycoprotein. The highest scores below model cutoffs are fragmentary paralogs to actual members of the family. Modifications include at N-linked and O-linked glycosylation, a C-terminal diphytanylglyceryl modification, and probable cleavage of the PGF-CTERM tail.
Statistics
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PSSM-Id: 275060
Aligned: 4 rows
Threshold Bit Score: 834.146
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011222384  73 QVGPGAVVFQGEEDLEDGG-NFGSNTDiG-QLQKVSGDNSGILLG--NPIPQ---DQPTGSYTFDGNSGTD---GVTLQT 142  Haloarcula mar...
WP_011570500 200 TVSSGAIVFQGEDNLGFSG-PNAPTSS-S-QLSRAGGANEGTPLD--RPVAQ---DAPTGTYDLNGGDPGDggfNVTVQT 271  Haloquadratum ...
WP_012289536  66 SVASGATIFQGEEDVTFRKlDNEKEVS-PaTLSRTGGSDEGVPLQ--MPIPE---DQSTGSYDSNGPDNDEadfGVTVQS 139  Halobacterium ...
WP_013035656  49 TIQSGDRVFLGEE-ISTDA-GLGASN--P-LLTGTAGNSEGVSLDlsSPIPQtteNQPLGTYDVDGSGSATt-pNVTLLA 122  Haloferax volc...
WP_011222384 143 PRVTSVEVQNGGSGDVTGSTLQTSSSgpDAFVRADYNFQEAEDLEITVEDENGLEVTNEIVvqktglptaDRN----NDN 218  Haloarcula mar...
WP_011570500 272 PRVSTLDVNNNNGEDVNGGTLVADQT--DANVLIEFNYGASEDIELTVEDSSGTEITNEIL---------DDS----QPS 336  Haloquadratum ...
WP_012289536 140 PSVTMLEVRNNADNDVTGGVLNTQQD--ESSIAVDYNYYAAEDLELTVEDEDGLDVTDEILaa------dQSGgayeDGT 211  Halobacterium ...
WP_013035656 123 PRITDSEILTSSGGDVTGSAISSSDAg-NLYVNADYNYESAEKVEVTVEDPSGTDITNEVLsg------tDTF----VDD 191  Haloferax volc...
WP_011222384 219 GASGSNGDFDVGWELDTTDIDEGQYTITVEGTEDLTFGDASETVTVNITSDQQASLNLDNDEVVQGENLQFNVENSPEGN 298  Haloarcula mar...
WP_011570500 337 IISGVDPDGNATIEIDPSQVDEGEYTFTAAGIEDLDFGDATRSTTVTIASDRNAELSLGNDEATQGENVGFTIDNSPEGS 416  Haloquadratum ...
WP_012289536 212 GNNGPN---TLRFDIDPNNVDAGDYTVSVEGVEDLDFGDATESASVTISSSNKASLNLAEDEVVQGANLKYTIENSPEGN 288  Halobacterium ...
WP_013035656 192 GSIGSTSSTGGGVGIDMSDQDAGEYTIILEGAEDLDFGDATETMTLTISSQDEIGIELDSESVTQGTDVQYTVTNGIDGN 271  Haloferax volc...
WP_011222384 299 YHVVLVESSEFRDGITADQASRIFRNVGDVQEVGLVDNTGpvSASTVASNVGSDQevA---DVTRYAYGVVEIDGGSGVG 375  Haloarcula mar...
WP_011570500 417 FHAVVVESSDFRDNIDANNADNIFREVGDTEDSGIVSPGG--DVLEIGTDIGATD--AvdsDNVAYAFAIVEIDGGNGVG 492  Haloquadratum ...
WP_012289536 289 YHAVTIDSSDFRDSSSGADAAKVMRSVGDTVDTGLVVDND--STTEIVDDYENTS--I---SDVDYAYAIVEIDDGNGVG 361  Halobacterium ...
WP_013035656 272 EHVVAMDLSDLQNDATTEQAKEVFRNIGDTSEVGIANSS---ATNTSGSSTGPT---V---ETADIAYAVVEIDGASAVG 342  Haloferax volc...
WP_011222384 376 SIETQFLDDSSVDVELYPASDSSNDG-YASGGSHASSVTVRdtdgdgtddsedaivtDL-----LETDDDQSFDVVEGEI 449  Haloarcula mar...
WP_011570500 493 GIETQFIDDTSVTVDLYTSSSTAQTP-YLDSNNNHIDANLV----------------ELesngnIQTDDDQDLDVLEGEV 555  Haloquadratum ...
WP_012289536 362 SIETQYLDDSSADIDLYPASDTEDAPdYVNSNEELTNGSAL----------------DG-----VSTDDDTDFDVTQGDI 420  Halobacterium ...
WP_013035656 343 GIETQYLDDSEVDLEVYDAGVSATA----AVGQDATN--------------------------------DITLTIEEGGT 386  Haloferax volc...
WP_011222384 450 TLDSPSGAYITGSQIDVNGTANQGVDQVALYARDNNDYELIEIDGSNTVSVDGDDTFSEEDVVLSQGSKGGNSIVSLPGS 529  Haloarcula mar...
WP_011570500 556 SLENPDNTYIVNSEIELNGTTAPGVDEVAIYARDQGDYELVQIDGSDTVTVDADNTFSEDDVSLTDGDGPGNDLLSIPGS 635  Haloquadratum ...
WP_012289536 421 TLDNPTGAYVVGSEVDINGTANEGTDDVVLYARDNNDFELVTVDGEKSIEVDSDDTFEEEDITLSDGDKGGDDILGLPGT 500  Halobacterium ...
WP_013035656 387 TLSSPTGQYVVGSEVDINGTATSS-DSVAIYVRDDGDWQLLEIGGDNEISVDSDDTFEEEDIALSGLSGDGSSILSLTGT 465  Haloferax volc...
WP_011222384 530 YRIGVIDVQDAdlDSDGTVDDTLTTSDFNSGVSGATALRVTDTALNGTFTTYNGQIASDD--GQIDVDGQAPGKDNVIVA 607  Haloarcula mar...
WP_011570500 636 YRIGVIDASDA--GGVGNIAAELDTSDFNGGVSSSKSIRVTDTELSGDFTFYNGQIAEEDrfNAVDVEGLAPGQSEVGVI 713  Haloquadratum ...
WP_012289536 501 YRLGIIAKSDAv-NSSGGVKDNIDTSDFNQGVSSTSSIRVTDTELTASFETYNGQVADDD--NQIDVEGTAPGKDNVAAI 577  Halobacterium ...
WP_013035656 466 YRIGVIDASDAdvGGDGSVDDSLTTSEFTSGVSSSNSIRVTDQALTGQFTTINGQVAPVEt-GTVDINGTASGANSVLVI 544  Haloferax volc...
WP_011222384 608 FVDSRGNAAAQVVSVDDDDSFSEEDIDITS-LSEGTVTAHILSSGRDGEYGD----TGTSSDSAFVNTIET--GYAGGSS 680  Haloarcula mar...
WP_011570500 714 FVGPRGNTETELVSVDSDDTFDEEDLSLGGqIAQGTVSAHFLSDGRDGEIGA----TGTDLEDFVNNDIPNfeDTAGGSA 789  Haloquadratum ...
WP_012289536 578 IIGSRGKVKFQSISVDSDDTFDEEDIDISE-LRQGSASAHILSSGRDGKFGE-------DTANSISDLEDEvgNYTSGSP 649  Halobacterium ...
WP_013035656 545 FVDERGNVNYQEVSVDSDGTYDEDDITVG--LTQGRVTAHILSVGRDSAIGDgslpSGPSNGATLNDLTGYldTLDQNNN 622  Haloferax volc...
WP_011222384 681 TGDQVREQILANTVDDTASDDLIVNEQFRLTDGLTTIESVS---------SPVEANGTLEVQGNTNRVPDDNTITVEILN 751  Haloarcula mar...
WP_011570500 790 TGEQVREQIIADSVDDTASDDLFITETFRLADGLTTIEEVN---------TPVSNNGTIEVTGQTNRKPDDTTIVLELLD 860  Haloquadratum ...
WP_012289536 650 TGDQIRDRILSNTVDDTASDDLIVTQQFRLVDGLTTIEATE---------G-GEAGGSLTVMGTTNRKADDNTITVELLQ 719  Halobacterium ...
WP_013035656 623 NGEQINELIASETVDETASDDLIVTETFRLAESSTSIDSIYpdaaeaagiNPVATGETMVIAGSTNLKPDDNTISIEVTN 702  Haloferax volc...
WP_011222384 752 SEDESVTVESTDEWGSDGQWSVNVDLSDVdiEPGNYTVEADDGDNTDRTSVTVVEagslE-EEQPDTETPEPDTETPEPD 830  Haloarcula mar...
WP_011570500 861 QEDNVITTASTDTWDTDGTYTASLSLDAV--ETGNYTLEADDSENTDRVPVQVVE----QvTEETPTPEPTATEEPTPTA 934  Haloquadratum ...
WP_012289536 720 GDA-SIEINSTDEWNSDGQWSVDVPLSNV--EPGNYTVEADDGDNTDRQNVEIVE----E-LEEPDQTTVDQPENNQTMT 791  Halobacterium ...
WP_013035656 703 EDGTSVALEDTDEWNNDGQWMVEIDTTDF--ETGTFTVEADDGDNTDTVNVEVVS----E---REDTTTSSDNATDTTTT 773  Haloferax volc...
WP_011222384 831 TETPEPDTETPEPDTETP--------EPdteTEEATTEASGPGFT 867  Haloarcula marismortui
WP_011570500 935 TPEPTATEEPTPTATPEP--------TA---TSTPETGTGTPGFG 968  Haloquadratum walsbyi
WP_012289536 792 TTMTETTTETTTEMTTTQenttengsEG---TSDGESGGSIPGFg 833  Halobacterium salinarum
WP_013035656 774 TDGPTETTTTAEPTETTE--------EP---TEETTTSSNTPGFG 807  Haloferax volcanii
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