Conserved Protein Domain Family
SPASM_w_grasp

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TIGR04193: SPASM_w_grasp 
SPASM domain peptide maturase, grasp-with-spasm system
A 4Fe-4S-binding C-terminal domain is shared by radical SAM maturases for Subtilosin A (S), PQQ (P), Anaerobic sulfatases (AS), and mycofactocin (M), hence SPASM. Radical SAM proteins with SPASM tend to be peptide maturases. All members of this family, like some members of the quasi-rSAM family TIGR04105, lack the 4Fe-4S cluster of the radical SAM domain (pfam04055) in the N-terminal region. Members of this family occur with an ATP-GRASP family protein, known as a possible maturase from microviridin biosynthetic clusters. Systems occur in Microscilla marina ATCC 23134, Kordia algicida OT-1, Sphingobacterium spiritivorum ATCC 33300, etc.
Statistics
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PSSM-Id: 211916
Aligned: 4 rows
Threshold Bit Score: 503.587
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_02160967   5 YFNLFANCFIVKGYNRSLIFDSQRMKTVFVPNDMYDIVIKAKSISIQQIYEEYGIDNKEI-IDEYFDSLIESELGFYMSE 83  Kordia algicida ...
ZP_07085461   3 YFNLFSNILITKGPTRILISDLQRNISELYPLELYEIIVELKSHSIETILKDYDQESRSI-VHEYIDLLLEKEYGFITEN 81  Chryseobacterium...
ZP_02162505   8 VFFVSSSCKLVKGAKRSIIIDYSRGDVQIIPNEYYDLVQDINRKKITEIIAHIDEDSKNS-FFSFIEYMLVHEFGFLTEE 86  Kordia algicida ...
ZP_02161463  11 YLYLFADCFPVKGYTRTMLCDVSRQKVYFVDNTYHELLTVLKDNTIGTVASMLEDDEDIMnFKEFINYLVEIELALVVDD 90  Kordia algicida ...
ZP_02160967  84 KErdFFPEINTAYHSPFQITNSVLeEMRD-M---KLYKKVISQLEALDCQYVELVFYNNTSNEFLTNILSLFKLSSIKFI 159 Kordia algicida ...
ZP_07085461  82 DWdrNFPSLSFEHHEPSTITNLFI-EMAD-I---GVLKKIYTSVENLGIKHLVIYSLNPLTSKDFIEIDTIFKNSVLSGI 156 Chryseobacterium...
ZP_02162505  87 IE--KFPEVSTAYDDDHVILKDAIlEVDEtVfneEDFSSLIFQINELHCNDLQIRISSKTNFSFIDKVLSIIDQANMLYV 164 Kordia algicida ...
ZP_02161463  91 LS--LFPDIALEWDHPSDIMNSII-DVRDeM---HDFEKIFNELEILACYHIQIRAYCTMSVEKLEEILALTVGKNFRSV 164 Kordia algicida ...
ZP_02160967 160 GLIIPYDSTKTPEFIKKICSQNLRLNKILVHNVQ----VQEKPKNITLGLTeiIYVNKEFTNFSY---------CGNISK 226 Kordia algicida ...
ZP_07085461 157 EVFSPFHQKINLSFVQALQKKTVRLYSLIFYNCS----KPPFKAKNEYKFS--LHFLKDDLKISA---------CGKVEL 221 Chryseobacterium...
ZP_02162505 165 ELYLKNEGEITNDQWHYLLKTYAPLSHVHVYNAK-------TEKAVDYYIEreTYFPIEIGKVSHhtldfekgcCGTISF 237 Kordia algicida ...
ZP_02161463 165 DFLLEYD-EKEAEIAALLTKYEIASVTYHTYKMElleeEAEAKNRSRVYHGslAYTKEKVSGCDS---------CGLINM 234 Kordia algicida ...
ZP_02160967 227 KFFSP-SLEHYVESQNHNTCLNQKISIDSQGNIKNCPAIPNNFGNIKDVTLTEAINTQGYKQLWSISKDHIEVCKDCEFR 305 Kordia algicida ...
ZP_07085461 222 KYFNT-NIPKVIEAVNHNSCLYKKMGIDKNGNLKNCPLMNESFGNINSQSLEETLNQSGFKKYWNLTKDYIETCKDCEFR 300 Chryseobacterium...
ZP_02162505 238 DHLNFsDMGTHHFHQKHNGCLFKKLTIDTTGNIKNCPKMTKTYGNFKEKRIEDVIQEKSYQSLWNVKKDDIAICRDCEFR 317 Kordia algicida ...
ZP_02161463 235 HSLGIrDIKGFTENRMFNGCLNRKISIDETGKVKNCPSMTKDYGHINETSLTTIAHDKDFQKPWNINKDSIDTCKDCEYR 314 Kordia algicida ...
ZP_02160967 306 HICTDCRAFTENPKDN-----YSKPLKCGYNPYTNEWSEWSTNPLKQ 347 Kordia algicida OT-1
ZP_07085461 301 YVCTDCRAYTENAEKNkeglnISKPLKCGYNPYTAAWEDWSKNPLKQ 347 Chryseobacterium gleum ATCC 35910
ZP_02162505 318 YNCSDCRAFTQQTDDE-----YSKPLRCGYNPYTNVWEDWSINPLKL 359 Kordia algicida OT-1
ZP_02161463 315 YICTDCRAYTTDGGL------YSKPAKCQYDPYTGTWA----NKVKN 351 Kordia algicida OT-1
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