Conserved Protein Domain Family
B12_SAM_Ta0216

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TIGR04190: B12_SAM_Ta0216 
B12-binding domain/radical SAM domain protein, Ta0216 family
Members of this family are enzymes with an N-terminal B12-binding domain and central radical SAM domain. Families TIGR03975, TIGR04013 and TIGR04014 exhibit a similar architecture, which may be associated with lipid metabolism.
Statistics
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PSSM-Id: 211913
Aligned: 6 rows
Threshold Bit Score: 878.696
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05570410    4 DISLVHAPSIFDFRT-RDIKLGPISDVIPSTPVFEMYPVGFISMLNSLISSGYNARICNVAAMMVSSASFDPVKYLKHVK 82  Ferroplasma aci...
WP_010917636   4 DVVFVHPPSIYDFRK-RDIDPGPISDVVPSTPVFEMYPVGFISMLNFLVQNGFNARIANVAVRMVESKKFNVEKYLSEIE 82  Thermoplasma vo...
WP_013119153   5 DVVFLHAPSVYDFRK-DTIMFGPISDVVPSSATFEMYPVGITSIADALEQTGFNVQIINLAYQMLRDPKYDVEKVISRLN 83  Thermincola potens
WP_011007736   6 DVALLHAPSVYDFRNlRRVHYGPISDVIPSRPVFDMYPVGFIYIVSYLEKRGVKTGIFNVAARMLNEPRLDVSKLLKGIK 85  Pyrobaculum aer...
WP_011848827   5 DVVFLHAPSVYDFRK-TAKVYGPIADVIPSTPVFDMYPIGFFSLASYLSSSGYKIGIVNLAARMLLDKDFDVERAVKGIE 83  Pyrobaculum cal...
WP_012308673   4 DVALIHPPSVYDFRK-SPSYASMISEVIPSMYVFDMMPYGFLTLATYLEKNGLNVAIFNLAAKMLKDRSFDVEKYIKRIE 82  Candidatus Kora...
ZP_05570410   83 SKIYGIDLHWLPHANGALKVAKIIKDLHPDSKVLLGGFSASYFADDIMTHYGYIDYILKGDLQETNIVKLAGAEDSYQ-- 160 Ferroplasma aci...
WP_010917636  83 APIFGIDLHWLPHAHGALNLARIIKNIHPESYVVFGGYSSTYFRYELMKNYDFIDFVLAGDFQEYGIYKLAEALEEGA-- 160 Thermoplasma vo...
WP_013119153  84 PRMFAIDLHWLPHAHGSIEVAKIVKKYHPHTPVVFGGLSASYYHEELI-NYPWVDFVLRGDSTEEPMKQLVLAIRRGM-- 160 Thermincola potens
WP_011007736  86 ATLYAVDIHWLVHAHGAVEVAKLVKEIH-GAPVAVGGFSATYYWREILEKYPFIDFVVLGDTTEPVIYQLLHAVERGDrg 164 Pyrobaculum aer...
WP_011848827  84 AEIFAIDLHWLVHSHGAIEVAKLVKKYHPNSAVVFGGLSATIYYEEVLSRYRQIDYVVLGDTVEVPFKMLVEHLLDSRr- 162 Pyrobaculum cal...
WP_012308673  83 ADLFGIDLHWAVHAQGAIEIARIIKEIHPESKVVLGGLSSTYFRYEVI-RYPFIDAILTGDSAELPLLRYIEE------- 154 Candidatus Kora...
ZP_05570410  161 ALDRVPNLIYRK-NNRIIHNKIEY--SSIDDVFL-NYGLLMKNAIKYHDIKGHLPYASWLDNTEAMTVIEHGCSFNCAFC 236 Ferroplasma aci...
WP_010917636 161 SYSEVPGLVYRE-NGRIKENQRYDfrKGLDNVFL-NYEVLLKNAIKYHDVKGHLPYADWLRNPEGFTMIERGCQLNCGFC 238 Thermoplasma vo...
WP_013119153 161 PVNDIPNLTWKTpDGKVRVNPLTHvpDNMDYVSIpSYSYCVRSVFKYANLHNTVPYLKWLNYPITALLTSRGCTQNCSIC 240 Thermincola potens
WP_011007736 165 KLYEIPNLAFRD-GDKLVNTGIRYipQELDDLKP-DYTAVARAMIR-SGIRNSLPWSTFFKHPIAAVISYKGCPLNCLAC 241 Pyrobaculum aer...
WP_011848827 163 GLEEVPNLAWRD-REAVKTTGIKFvpKSLDEYAV-DYGEVLKIAAR-GGALSAIPFAGFLKEPIGAVLSYKGCILNCATC 239 Pyrobaculum cal...
WP_012308673 155 GPERTPNIIWKD-GGKIRENPLSWipESLDEFGI-DHEFLLRNVKKTRDLAISSPFASFDEAPIAGVITMKGCPFNCITC 232 Candidatus Kora...
ZP_05570410  237 GGSNFAYKNNYNSVAPlYRKPLVIAEEISLVGEMLGSPVFITGDMNNAGEKFYSSLFKELKDRKVSLPLLTEYFTPPGKE 316 Ferroplasma aci...
WP_010917636 239 GGSNFAYKSNFAMNYQ-FRDPCRIAEEIEMSQDILGSPVFIAGDIALAGPHYYERLFKCLNERRIDIPLLTEYFKPFNED 317 Thermoplasma vo...
WP_013119153 241 GGSQAAYKKICNREKPaYRSPKTMVEDILFLQKLGRAPIFILNDFRMAGPAHTEEFLKLLKEADIKNELVFELFFPGDDN 320 Thermincola potens
WP_011007736 242 GGSNYTYSAVFGRRGLgRKSPETLVEEFREITERLKIPVFFVGDLQYLGRRYLEEFAELLRRKKPSVELIFEFFTPPPRE 321 Pyrobaculum aer...
WP_011848827 240 GGSLCAYASYFSRTYLgVKKPETLVNEVKSIEQYLRVPIFVVGDLQPLGVKWIEKFVEGLRRERFSSEIIFEFFTPPPLN 319 Pyrobaculum cal...
WP_012308673 233 GGSRFAYERAYMRRKLaIKSPEAIADEVEGIARISKMPIFFVGDLRIGGMGRVERVSKLLKELDLENELIFEFFTPPSKE 312 Candidatus Kora...
ZP_05570410  317 YLNELSHRFPDFTVEISPESSSEVIRNRNGR-PYSNKGLEDFLQNAVTAGAKKIDVYFTIGMSGQTVNDVNADIDYSEKL 395 Ferroplasma aci...
WP_010917636 318 YVKSLSKTVEDFSMEISPETYDENVRSWNKS-GYSNKDMERSFSLAEKYGSKKFDVYFSIGLSHQNKKNVMDTVEYAGNI 396 Thermoplasma vo...
WP_013119153 321 FFAKLADAVPKFSLEITLESHLERIRRFNGKfAVPNEVFENTVASAFKYGCRKIDIFFMTGIPKQSYHDAISCVDYCREL 400 Thermincola potens
WP_011007736 322 VLSLYRRAGDMVYLQISPESHDEDIRKHYGR-PYDNSSLLEFIKNAAELRFERVDLYFMVGLPMQTPENVKGLGDFFLEL 400 Pyrobaculum aer...
WP_011848827 320 VLKLLSKASDSVYLQISPETQDELLRLKFGR-PYDNSSLETFIKRTLSLGFARLDLYFMVGIPAQTLDSVLAMPNYVRKL 398 Pyrobaculum cal...
WP_012308673 313 VLGYIRRTSHSVYLQISPESPFEDIRRAFGR-PYTNQSLEKMVSNSESLGFERLDLYFMVGLPFQRREQAISVADYFRKL 391 Candidatus Kora...
ZP_05570410  396 MKKFs-SAKEKLYTFISPLTPFIDPGSLIYEHPETYGFKITAKTITDYFNLLeNGKIWTDFLNYYTNWMSVEQIARATYE 474 Ferroplasma aci...
WP_010917636 397 MKGYm-RSSMRMSTFISPIAPFVDPGSLWYEKPDLYGFKIYGRSVSDVYRILdLGRTWYDFLDYETNWMTKDDIVNSTYD 475 Thermoplasma vo...
WP_013119153 401 LDKF--NADKRLCFFVAPLAPFLDPGCLAFENPEKYGYRQFYKTLEEHRQGL-TMPSWKYILSYETDSMTRDEIVEATYE 477 Thermincola potens
WP_011007736 401 AK----RGGGALNAFVAPLAPFVDPGSPAFHNPSKYGYVILARSFEEHRRLL-LAERWYMMLNYETTTMTRSQIAEATYN 475 Pyrobaculum aer...
WP_011848827 399 YGLLprPQRHRLDVFVSPLAPFIDPGSRAFENPRAFGYRLRARTLEEHRRLLeFSRDWVEMLNYESDHISRSEIAYAVYQ 478 Pyrobaculum cal...
WP_012308673 392 R-----EISKRLDSFVSPLAPFVDPGSRAYMDPGAFGYIITLRDFEDYRRAL-LSEHWMKSLNYETRWMNRREIAEASLD 465 Candidatus Kora...
ZP_05570410  475 SEIRMIKMRQSLGLLKDVDADEIVKNITAYM-------HGDDYISNENKSS----HLSYI-----------EKDVEWSNK 532 Ferroplasma aci...
WP_010917636 476 AEIRMTQLRYEVGEITEEARDTIIRNVMNYR-------EGNNYCRNDRMDK----HLAYM-----------SKDIEWSHR 533 Thermoplasma vo...
WP_013119153 478 AALRLNELKKEYNLIEEQLYRQIDYRIRTARdii-reiDQIMTLSDEKEKKlklnEIRVKvaqvnkgslcgEDELTWPIT 556 Thermincola potens
WP_011007736 476 AVESLARAKYIAGIIDDEYLGAVLETVKNAR-------SGAPPVGLNSKETvreeEL--------------YPKKFW--I 532 Pyrobaculum aer...
WP_011848827 479 TAREFVKIKAENGVISWDQAKETLERMEMQR-------NGAF-----VRSTidlyPSRRL-----------LRSVRWKLI 535 Pyrobaculum cal...
WP_012308673 466 AYERLLAERYLQGIVDEEAYELAMERIKLDKlvldrveRGIP--IDDLKDRi--dELARR-----------SDARVKKGL 530 Candidatus Kora...
ZP_05570410  533 HKLT-----RDSFLISLYKDYNDFK 552 Ferroplasma acidarmanus fer1
WP_010917636 534 HKPT-----LTSLLILLYRSYDSVI 553 Thermoplasma volcanium
WP_013119153 557 ERFAsffslFKVLVSLFFKEWALFF 581 Thermincola potens
WP_011007736 533 SYLT-----PRSVAEIIRYSLGRLA 552 Pyrobaculum aerophilum
WP_011848827 536 SLMG-----FRGLVS-IARDLAPLI 554 Pyrobaculum calidifontis
WP_012308673 531 SLYP-----TSGLAERIRNPILRAL 550 Candidatus Korarchaeum cryptofilum
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