Conserved Protein Domain Family
rhombo_lipo

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TIGR04179: rhombo_lipo 
rhombotail lipoprotein
Members of this protein family are probable lipoproteins. Nearly every member ends with a C-terminal region consisting of a glycine-rich probable cleavage site, a hydrophobic probable transmembrane helix, and a cluster of basic residues, as described in putative protein sorting region model TIGR03501. Furthermore, members tend to be encoded next to a rhomboid family protease, called rhombosortase (TIGR03902) predicted to perform a C-terminal cleavage.
Statistics
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PSSM-Id: 275032
Aligned: 6 rows
Threshold Bit Score: 350.26
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05311643   19 LSGCA----QNVTRSSS-STSLNRILEPVADSRRAEKTA--PLTLPLSVAILAIPGSQGRH--------------VPNTT 77  Geobacter sp. M18
WP_011637834  16 LSSCSmlvsQQSGKQSV-SSSLMDFLYPNKDDRSAHSAEvpLLTLPVKVGIAFVPSTGFQKe------------aVHSKD 82  Shewanella frig...
WP_020910497  20 LTGC------ASQQVNT-KSSVMEYLYPKSSDTF-ETPStpHLTLPLRVGVAFVPESEDSGssrhfwtgnlysgsIAEAK 91  Shewanella piez...
WP_012373625  23 ATGCHy---FNQQRTDR-SSSVVAFLYPRESNPLP-PTAipVLRLPLRVGVAFVPSASGRIve----------ggLSEMQ 87  Opitutus terrae
WP_011717250  19 LGGCSaffnGNTTEKNVvSSSLVEYLYPDDKQREAQQPSipVLRLPITVGIAFLPSTHWQFe------------aLDSSS 86  Shewanella sp. ...
WP_012525145  24 lGACA----Q--TTARR-ATSVVNYLYPAGQQ-EPAQPSipKLTLPLRVGIAFVPPAASEVtpaayv--gdrdaaAPETE 93  Anaeromyxobacte...
ZP_05311643   78 LRMASEKLKEQLLAYPkYVSSVAIVEKDDLANK---ISLDKIRSGYGADVAIVLSYQQDQRTNQsGVFGLLDATIVGVFL 154 Geobacter sp. M18
WP_011637834  83 QYELLEKVKAAFVQYD-YIDRIEVIPSTYLAGGdgfNTLEQVGRLYDVDVMALVSYDQVTQSVE-NNAALLYWTIVGMYV 160 Shewanella frig...
WP_020910497  92 KNQILEKVSENFRALD-FVSSIEVIPTAYLTPGgsfANLSQIKTMYGIDVIALVSYDQVQFTDE-GALSLSYWTIVGAYI 169 Shewanella piez...
WP_012373625  88 KTALMERVAKEFKAYP-FVESIEIIPTMYLQPQggfTNLDQIRRMLNIDVVALIAYDQVQFTDD-NFLSLSYWTIVGAYI 165 Opitutus terrae
WP_011717250  87 QIALLDKVKQSFVKYD-FIDRIELIPSTYLKNGkgfSTLQQVARLHDVDVMALVSYDQLLQSSE-NKASLLYWTIVGMYM 164 Shewanella sp. ...
WP_012525145  94 RIRLMETIAAHFRERP-YVKSVEIIPTPYLTPGggfTNLDQIRNMFGVDEIVLIAFDQVQFKDQ-GMATLTYWTLVGAYV 171 Anaeromyxobacte...
ZP_05311643  155 VPGVELKTASIIDGKVIHIPSNAIIFRASGKDQRNGRATSYGHQGALTQASIDSILAATGDFGSALTAKIDKFDKydlsR 234 Geobacter sp. M18
WP_011637834 161 IPGNENTVQTFVDTAVFDIKSRKMLFRAPGISKLEKRTTAIGIDETLAEKSMQGFDLAVTDMTKNLDDELARFKV----R 236 Shewanella frig...
WP_020910497 170 VSGEKNDTSTLMDTVVYDISSKKMLFRAPGTSQITGSSTPVNLSEELRSDSVRGFEQAAENMTQNLNSQLTQFKE----K 245 Shewanella piez...
WP_012373625 166 FQGNKNDTQTLLEAAVYDIPSRHLLFRAPGASRVEAGSQAMNLSRNLRDDSVHGFDVATGELIKNLKLQLEEFRE----R 241 Opitutus terrae
WP_011717250 165 VPGNENAIQTFVDTAVFDMRSQKMLFRAPGINQLTDTSTAVSVTNVLREKSTEGFELAVNDMITNLDAELARFKT----R 240 Shewanella sp. ...
WP_012525145 172 VQGEKHDTRTLMDAVVLDIPSRKLLFRAPGTSVVKGRSTPVNESEELRQDRQQGFKLATAELITALDAQLVAFQE----R 247 Anaeromyxobacte...
ZP_05311643  235 AMSLSsLTGGESKGGAapaegndywnevntfkrTgGGAFGfLPLLLSAAICCAAWRRK 292 Geobacter sp. M18
WP_011637834 237 VKEEK-IAKVEHSNNY-----------------S-GGTID-IRFGLLLLIMLFIRLRL 274 Shewanella frigidimarina
WP_020910497 246 LKQEPdQVKISHRDGY-----------------S-GGSLSlWDCIVLLFLSQLAWQRK 285 Shewanella piezotolerans
WP_012373625 242 VKRAPgEVQIEHKPGY-----------------TgSGSFGaGFAGALALLALGRWLRR 282 Opitutus terrae
WP_011717250 241 VKEEH-IATIEHKQGYsgggslsllilsllgifalrriticre--------------- 282 Shewanella sp. ANA-3
WP_012525145 248 LKAQPgEVEVVRTAEYekr-----------aaaSgGGavdaatlavvaalaggalvgs 294 Anaeromyxobacter sp. K
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