Conserved Protein Domain Family
MarR_EPS

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TIGR04176: MarR_EPS 
EPS-associated transcriptional regulator, MarR family
Members of this family of MarR-family transcriptional regulators are associated with long genomic loci consisting of genes encoding enzymes for the biosynthesis of exopolysaccharides. These genes include glycosyl transferases, sugar modifying enzymes (epimerases, isomerases, methyltransferases, aminotransferases, etc.), and exopolysaccharide polymerases (wzx, wzy). In Leptospira interrogans, borgpeterenii and biflexa, this gene is observed first in unidirectional EPS biosynthesis loci as long as 90 genes. MarR genes (pfam01407) are known to bind to DNA regions with palindromic or pseudopalindromic sequences as homodimers, and to bind small molecules as triggers for conformational changes controlling on/off states.
Statistics
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PSSM-Id: 275030
Aligned: 19 rows
Threshold Bit Score: 150.1
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05105844    2 LTDEYRYKIFKLVEANPEVSQRELARKLGISLGKTNFCLKALIDKGLIKVNNFRNSNNKLAYAYKLTPSGIDEKANVTIR 81  Methylophaga th...
ZP_03560616    5 QRDVVRFRVLQAIEQNPKASQRELAKALGVSLGSVNFCLKALVDKGLVKIENFVKSDHKKGYAYYLTPSGLIEKSDITAQ 84  Glaciecola sp. ...
ZP_01913964    8 QREEVRFRVLRLIESKPDISQRELADELGVSLGQINYQLKALKERGLIKVGNFMRSDNKLAYVYQLTPKGVANKLAITTR 87  Limnobacter sp....
ZP_00957019    8 LQQDAHYRVLRLLKDNPEMTQRQLAKAAGISVGGMHYLLKALIDRGFVKLGNFSASTDKRRYAYVLTPSGIAQRALMTRV 87  Sulfitobacter s...
ZP_01126008    2 RPEDLRFQVLRHLEQKPDMTQRELAATLGISLGRVNYCVQALIERGFVKAANFRNSRNKRAYLYKLTPNGLTEKAALALR 81  Nitrococcus mob...
ZP_01158227    2 IPDDLRFRLLRLLESDPSMSQRQIAAELGLSLGRVNYVLRALIEKGQVKAENFRVSQNKLRYAYLLTPSGIEAKTRLASG 81  Oceanicola gran...
WP_011630050  20 tREEIQFRILRLLQDNPQLSQRDLAAELGVSVGSTHYCLRALVDKGWVKANNFAKSTRKTRYLYQLTPSGIAEKAALTRR 99  Alkalilimnicola...
WP_012353605   8 IQEDTYFRIMRILQENPDLTQRELAEKLGVSVGGLNYCLKALMEKGWIKVQSFSQSKNKFGYVYILTPRGIVEKAALTSR 87  Cupriavidus tai...
WP_011813559   2 DTEELHLQVLRLLDDNPHLSQRQIAGELGLSVGKTNYAVRSVIERGWVKAQNFSHSPNKRRYLYRLTPAGVSEKAQLAYR 81  Halorhodospira ...
WP_010960439   3 PREQAQLRILKNLEDSPGISQRVLAERLGISLGKTNYLLKALLEKGLIKAGNFRRSGSKLGYLYLLTPQGIEQKLSLTRA 82  Methylococcus c...
ZP_05105844   82 FLKKKMKEYELLKQEIENISQEVRH 106 Methylophaga thiooxydans DMS010
ZP_03560616   85 FLKHKVAEYELLKQEIKELQSQVHR 109 Glaciecola sp. HTCC2999
ZP_01913964   88 FLARKRQEFELMKAELEELEREVNK 112 Limnobacter sp. MED105
ZP_00957019   88 FLKRKMDEYEALRQEIEMLSTELEI 112 Sulfitobacter sp. EE-36
ZP_01126008   82 FLRRKEQERQALLQEIEALRAELGE 106 Nitrococcus mobilis Nb-231
ZP_01158227   82 FLKRKLAEHEALQAEIRALQREMEV 106 Oceanicola granulosus HTCC2516
WP_011630050 100 FLKRKREEYQAIRAEIAELEKDLKD 124 Alkalilimnicola ehrlichii
WP_012353605  88 FLKRKMEEYELLKSEIESLRAEVAD 112 Cupriavidus taiwanensis
WP_011813559  82 HLQRKRAEHERLMQEIEQLRAEVEa 106 Halorhodospira halophila
WP_010960439  83 YLARKEAEYEALRAEIAALHVELST 107 Methylococcus capsulatus
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