Conserved Protein Domain Family
DGQHR_dnd_1

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TIGR04172: DGQHR_dnd_1 
DNA phosphorothioation-associated DGQHR protein 1
The DND system produces an phosphorothioation modification to DNA, replacing a non-bridging oxygen of a phosphate group with sulfur. The modification causes DNA degradation during electrophoresis in Tris buffer. This protein, like DndB (TIGR03233), contains a DGQHR domain (TIGR03187), which also occurs in several contexts that suggest lateral transfer rather than DNA phosphorothioation-dependent restriction.
Statistics
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PSSM-Id: 275028
Aligned: 7 rows
Threshold Bit Score: 533.542
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_06191918    7 LPAIKVEQPIGTFYAVSIHSDLLSKVAFS--SRAE----------YKSDGvfsLLKGNQRELDLKRSKQIGQYIDSVEST 74  Serratia odorif...
ZP_06267640    4 IYGIRVSQPLGDFFIAKIKAKDLLEISTS--SVAR----------YNKEG---KLVGNQRPLKLPRLKAIANFIKSAEMC 68  Prevotella bivi...
ZP_05743349   10 FPAIRVDQPLGEFYAVAIPAEILLDVCYTdkLTAI----------RSDDAy--QLRGSQRQLRDSRLRDIGRYISTDEAA 77  Silicibacter sp...
WP_011806099  10 CPAIRIQQPLGNFYAFSLRADVLNKITYS--LPAEvrerleqetsENKGGy--SIFGSQRAEKKTRLQEIASYIQTTDAT 85  Acidovorax sp. ...
WP_011567108   9 VPTLRVDQRLGSFYVAVLPAELLLRVCASdrMSAS----------LNPDGvgyTLEGTQRVIQDKRLSEIAAYINRVDSA 78  Roseobacter den...
WP_012535052   7 TGVIEVSQPMGDFYVFKISAKKLVSITFS--M-AA----------YNQNG---KLSGVQRKLRLDRIKQIALYSNSYNAT 70  Aliivibrio fisc...
WP_012815123  13 INAIKVTQPYGDFFQTVMSAEDLLKCIYV---NQA----------EVDDG---EISGVQRKESMPRALDIAKFIDSDEAA 76  Cronobacter tur...
ZP_06191918   75 FPNSIILGANF-D-SNG-NLIEDYDIR-------------WRVEKDG---GRYNLIIPSedNIVATIIDGQHRLSGFEYS 135 Serratia odorif...
ZP_06267640   69 FPTSILVAANV-D-NEG-NIIEEQSKR-------------WSIHPTSi-sDCFEIKIPS--EVSSLIIDGQHRLNAFSYT 129 Prevotella bivi...
ZP_05743349   78 FPNSIILAANY-SgEDG-LAVQDEAVK-------------WQIRSRDgneDCLELVIPTn-QRLAPVIDGQHRLFGFTEA 141 Silicibacter sp...
WP_011806099  86 FPNAIILAANY-S-QDG-LYIEDENLQ-------------WTAKEQGn--GFWSINIPSreLPCASIIDGQHRLHAFQHL 147 Acidovorax sp. ...
WP_011567108  79 FPNSIIVAANY-DrETGfDQTENEDIAkeegetndgissaWTVQTTDn--GCHKLTIPSe-AKLAAVIDGQHRLFSFAKA 154 Roseobacter den...
WP_012535052  71 FPNSIILSANF-D-VDG-SLIVDDKLR-------------WDVKNGE-------LTIPTd-KKIASIIDGQHRLEGIREA 126 Aliivibrio fisc...
WP_012815123  77 FPNSIILSVNHnD-NDI-PAAEDE--K-------------WKFEQIEg--DLYSIIIPNinLRLCSVIDGQHRLLGFRYA 137 Cronobacter tur...
ZP_06191918  136 DREG----MDLLCSVFIDLPAPYQAYIFATINFNQKNVNKSLAYDLYGFRVEEEDRKDWSPEKLAVYLARRLNKYCE-PL 210 Serratia odorif...
ZP_06267640  130 EEQFk--dIELVCSIFLDLPNPYQAYLFATINGNQKRVDKSLALELFGYDVEDKPSNTWSPEKLAVYLTRKFNFRKDsPL 207 Prevotella bivi...
ZP_05743349  142 KPDRl--kMPVLCSVFLDLPRPYQAYLFATINSTQKPVDRSQTYELFGYNIDEEPADRWSPEKLAVFLSRKLNTENSsPL 219 Silicibacter sp...
WP_011806099 148 PEDAperaMELLCVVFLELPTPYHAYVFATINFNQKKVDRSLAYELFGFDVDERPTHLWSPETLAVYLTRLLNTDEAsPL 227 Acidovorax sp. ...
WP_011567108 155 SQEAlq-sMNLICSIFIDLPKALQAQIFATINSTQKRVDRSLTYELFGYNVSDEPEEYWTPDKLAVFFARKLATDSGsPL 233 Roseobacter den...
WP_012535052 127 IKNPdfqdFDILCSVYIDMPFSEQAEVFTSINFNQKKVDKSIAYELFGYDLDETDKAYWSPDTLAIYLTRIFNNDPNsPI 206 Aliivibrio fisc...
WP_012815123 138 ENKR----IKLPCSIYDSLPPSNQATIFSTINFNQQKVPKSLAYRLFGYSLDDISREYWPPDLLAVYFSEKFNKNSEyPF 213 Cronobacter tur...
ZP_06191918  211 KDKIKLGAps-----dIDESSF-I-Rk----lISLSTVVDGVLKLITNNPKKDRDELLNFKN---KNGRE----ALSr-- 270 Serratia odorif...
ZP_06267640  208 YQKIKLAPlf----ssIEEITDrT-Kw----lLSTAAMVEGIMHLISSNPQKDRDFLAMKRSlwsGTGTRsdlgKMEsng 278 Prevotella bivi...
ZP_05743349  220 YQRILVAAendfaisrVEARSQ-N-Rw----mVSTATVVDGITRLISSSPKQDADALRTGK----QQTRA----MISglr 285 Silicibacter sp...
WP_011806099 228 YRSIFPAAds-----dAIFSKN-L-DstgfvkISMATVVDGILRTISKNPQEDRNTVRRPKNk--NTGRK----ALA--- 291 Acidovorax sp. ...
WP_011567108 234 RGRITVAPkrd---trLEQIAA-DaAw----kISTAVAVDGILRLYSSNPKRDANLMREGDA---HTREV----LLKg-- 296 Roseobacter den...
WP_012535052 207 KGKVFTSF--------VGEVKN-E-Dw----yISTACLVESISLLMTTDATKDRYYLHQSAFf--NKGRV----KLKd-- 264 Aliivibrio fisc...
WP_012815123 214 YQRLKNRV--------LHEVTA-D-Dw----sISSSVFIDGVLSLISKNPRADRYTINAIYSsekEKGRK----RLLdts 275 Cronobacter tur...
ZP_06191918  271 NMSSQPLREFYLDYKDEVIEKIVNKYFLKINDLLW--IYQTEDSYLLKTIGFQTQFEILRQYL----LATSdynlenIDN 344 Serratia odorif...
ZP_06267640  279 KRDTSVLRDLYIENKDEEIYEIIFRYFDAVNEILW--KNASADSVITKTIGISVLFDILKAIIenegIQDS------FEK 350 Prevotella bivi...
ZP_05743349  286 PRDGSPLRSLYLETRDKVLLGAVTNFFDAVINVCG--PDMPVTSYLTKTVGVQALFDTLRE-LapsaMEERdfseewFRN 362 Silicibacter sp...
WP_011806099 292 PIRGLPLRDFYIAGNDKATYEILCNYFTAVSKSIW--KPAGQNSYLKKTVGIQAAFDILRELLdsraVNAAnystaaLEA 369 Acidovorax sp. ...
WP_011567108 297 PKDKSPLRSAYIEGNDAVIFKMVLNYLKAAEEVFW--KNAQEGSYIFRTVGVQAIFDILRK-LaseaFDKRdissgyFQA 373 Roseobacter den...
WP_012535052 265 LKVKAPLRNMYIKGNDKDIFVVINNYLSKLQSLGW---FSSSDLVTTKTIGFLAMFEVLRDILns--hEESefldidFE- 338 Aliivibrio fisc...
WP_012815123 276 SKDNSPLRGFYIKNNDKAIEQILIIFFSTVKEHFWteKCINEGTVLVRTIGISALFKFLRARL----ISMSkidmenIEK 351 Cronobacter tur...
ZP_06191918  345 KLIMLRDVDFT----DIFF-TASGIGATRMKNIALIRIG 378 Serratia odorifera 4Rx13
ZP_06267640  351 YISLISDVDYT----SDYF-SLSGEGKVKLRRILKYKLG 384 Prevotella bivia JCVIHMP010
ZP_05743349  363 KLKPLGTVDFT----NQVFqQASGQGRTLIRRVIFTLLG 397 Silicibacter sp. TrichCH4B
WP_011806099 370 LLAPCSKLDPA----GNKY-QASGIGRSEIRRELKQAIG 403 Acidovorax sp. JS42
WP_011567108 374 VLDPAKDIDFS----STEFqNASGSGRTFIRKTIEEAVG 408 Roseobacter denitrificans
WP_012535052 339 FMRKVRIELLH----KSEF-NFSGIGKSQIKNLILDAIK 372 Aliivibrio fischeri
WP_012815123 352 LCFAIKEIDPSeftdNNKY-TSTTVGQGKVYSYLNENVK 389 Cronobacter turicensis
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