Conserved Protein Domain Family
rSAM_SeCys
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TIGR04167: rSAM_SeCys 
radical SAM/Cys-rich domain protein
Members of this protein family have an N-terminal radical SAM domain (pfam04055) and a C-terminal pfam12345 domain. The C-terminal region has several conserved Cys residues, one of which is replaced by selenocysteine in at least five bacterial reference genomes.
Links
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Statistics
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PSSM-Id: 275025
Aligned: 63 rows
Threshold Bit Score: 440.026
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ZP_01124275   10 SLRRRR-LETLQVNLGYRCNQSCRHCHVDAGPW-RTEMMESHQVELIPQVLRHCQ-LKTLDLTGGAPELHPQFRDLVRAA 86  Synechococcus s...
ZP_05035221   19 PLSKQT-ITTLQINLGRLCNLSCQHCHVEAGPH-RTEELSPEVCEQLLTIIDRFDqIKTVDLTGGAPEMNYGFRPIVEAA 96  Synechococcus s...
ZP_01853005   43 GLHATS-IETLQINMGKLCNMTCEHCHVDAGPD-RREIMTAETVQECLQALEHPG-FQTLDLTGGAPEMNPHFKDLVIAA 119 Planctomyces ma...
WP_012307077  20 PLSKTP-INTLQINLGKKCNLACTHCHVEASPK-RTEALSPEICAQLIQLIRTFPqIQTVDLTGGAPEMHDGFRQLVAAA 97  Synechococcus s...
WP_011242909  24 PLTKAH-IHTLQINLGKRCNLACSHCHVEAGPK-RTEELTEEVCQQLIQLIQKHPeIQVIDLTGGAPEMLYGFRPLVEAA 101 Synechococcus e...
WP_011611612  16 ALTKKK-ITVLQINIGRRCNLACTHCHVEASPK-RTEELSKEICEQLIELINRFPqIQTVDLTGGAPEMNYGFKPLVEAA 93  Trichodesmium e...
WP_004163457  11 PLTKQK-ISVLQINLGKRCNLACSHCHVEASPG-RSEEMTPEVCEQIIELIERFPqIKTVDLTGGAPEMLYGFKPIVEIS 88  Microcystis aer...
WP_011715021  16 vMEAAS-LSLIQVNVGLTCNLQCRHCHVGAAPQ-RTEQMSWAVMQQVLALITQSG-CKQVDITGGAPEMNAHIQPFIQAL 92  Magnetococcus m...
WP_012362404  23 PLNKQR-ITVLQINLGRRCNLACNHCHVEASPK-RTEELSPKICQQLIELINRFPqIETVDLTGGAPEMNYGFKPLVEAA 100 Cyanothece sp. ...
WP_011935161  26 SLQRQSsLQVLQLNLGRLCNMRCSHCHVDAGPDqAHTQMPEAVVQQCLNAMERLK-PELVDLTGGAPELHQSFRQLVRHA 104 Synechococcus s...

ZP_01124275   87 RALGVAVIDRCNLTILSEPGQESLAEFLAESGVRIVASLPCYEQERVDLQRGRGVFERSLDALKVLNRLGYGMPGSpLEL 166 Synechococcus s...
ZP_05035221   97 KAKGKDVIVRSNLTIFFEPGYEDLPEYFAAHQLHVVASLPCYLESNVDAMRGKGVYDDSIRAIQRLNQLGYGRDAK-LQL 175 Synechococcus s...
ZP_01853005  120 RKLGRRIIDRSNLTILLAPGFQDLPQFLADQNVEIIASLPCYLQENTDAQRGDGAFQKSIQALQKLNSLGYGIPGSeLKL 199 Planctomyces ma...
WP_012307077  98 RETGKDVIVRSNLTIFFVPGYEDLPTYFAENQVRVVASLPCYLEDNVDRQRGAGVYQDSIAALQKLNALGYGRDPa-LVL 176 Synechococcus s...
WP_011242909 102 RQANKTVIVRSNLTIYFEPGFEDLPEYCADKQVRIVASLPCYLSDNVDKMRGHGVYDASIRALQKLTELGYGSQPq-LVL 180 Synechococcus e...
WP_011611612  94 IKNNKEVIVRSNLTIYFVPGFEDIPQYCAENKLRIIASLPCYLEDNVDKMRGNGVYQKSIRALQWLNRLGYGQNQS-MIL 172 Trichodesmium e...
WP_004163457  89 RKAGKQVIVRSNLTIYFEKGFTDIPEYCAGHQLRVVASLPCYLADNVDKMRGLGVYDRSIAALQWLNRLGYAQEPN-LIV 167 Microcystis aer...
WP_011715021  93 RARDVAVQLRTNLTLHRDPDWHAMAPWLRDHGVVLVGSMPCYVQENVDQQRGDGVYQASIAALQRLNQLGYGVAGg-VPL 171 Magnetococcus m...
WP_012362404 101 RNIKKEVIVRSNLTIFFETGFEDLPEYFAKNQLRVIASLPCYLEDNVDKQRGKGVYDASIRAIQKLNQLGYGNDPN-LIL 179 Cyanothece sp. ...
WP_011935161 105 RSLGCRVIDRCNLTVLLLPALADLAPFLAEQQVEIVASLPAPEELSTDAQRGDGTWQASLEALRLLNRLGYGQDGSgLEL 184 Synechococcus s...

ZP_01124275  167 DLVYNPSGP-----S------LPPPQRSLEEQYREQLMASHGISFHHLLTLANMPIKRFARDLEVSGELEGYQNLLREAH 235 Synechococcus s...
ZP_05035221  176 DLVYNPPVPkdanfS------LTPSQTKLQADYSAYLHEHFGIVFNHLYTITNLPIGRTKFQLQHRHLHQPYLQFLASHH 249 Synechococcus s...
ZP_01853005  200 TLVYNPVGF-----S------LPPNQSELEAAYRRELNQRFEVQFTNLITITNMPISRFLSELIQQERFEEYMERLVNAF 268 Planctomyces ma...
WP_012307077 177 DLVYNPPVPrnqdfS------LTPNQAALEQDYKAYLARHFQIQFNHLFTITNLPIGRVKNYLQAHALYKPYLSFLAAHH 250 Synechococcus s...
WP_011242909 181 DLVYNPPLP-----TqekqfrLTPNQISLEQDYKTFLQEKFSIQFNHLLTITNLPIGRTGQFLKRQDLYGKYLQFLSDHF 255 Synechococcus e...
WP_011611612 173 DLVYNPPVP-----Nsyk-faLPANQKNLEQDYKSYLKEHFNVKFNQLFTITNLPIGRTRLFLENLKIHQPYLDFLEANF 246 Trichodesmium e...
WP_004163457 168 DLVYNPQIPksdnfS------LTPDQLSLTRDYKKFLQEHFNISFNNLFTITNLPVGRTRFHLEHRQLYQPYLQFLEDYF 241 Microcystis aer...
WP_011715021 172 NLVYNPGGA-----H------LPPPQSSLEEAYKKAMWQQYGITFDQLLTLTNMPIGRFRADLRREGQEQAYWGLLQASF 240 Magnetococcus m...
WP_012362404 180 DLVYNPPIPsnenfS------LTPNQVSLEKDYQTFLKDNFDIKFDQLFTITNLPIGRVKKYLKHKKLYDSYLQFLESHY 253 Cyanothece sp. ...
WP_011935161 185 TLMSNPAGE-----E------LQQLTPCDEIRWRKTLAE-MGVAFNHLIGLNNMPIARFLLELEEQQRTTTYLQRLRQAY 252 Synechococcus s...

ZP_01124275  236 CSDNLDGVMCRTLISVSWTGALHDCDFNQQLGC--SVGA--E---PA--VLADLl-sT---QDGLVd--Q------PIAV 294 Synechococcus s...
ZP_05035221  250 NADTVEHLMCRNELSVDYLGNVYDCDFNQMEAL--PARA--PngeAL--TLSTFlaaG---TLDLI---E------QVAT 311 Synechococcus s...
ZP_01853005  269 NPATVSGLMCRSILSVDWQGFLYDCDFNQMLNL--PVAA--Lk--RR--HIRDF---D---YDDLVs--R------KIVT 326 Planctomyces ma...
WP_012307077 251 NGTTVPNLMCRSQLSVDYEGNIFDCDFNQMESL--PART--PdgqPV--TVRHL---L---EAESLdviE------TVAT 312 Synechococcus s...
WP_011242909 256 NSETVEGLMCRHQLSVDYQGQIYDCDFNQMAEV--PALNqqGn--PL--TVANLlasD---RLDLIs--T-------IQT 317 Synechococcus e...
WP_011611612 247 NGETIENLMCRNELSIDYLGNVYDCDFNQMENI--PAKT--Sk--GE--TIT-----V---AKLLEg--NsldiieQVQT 308 Trichodesmium e...
WP_004163457 242 NGDTIEHLMCRNQLSIDYLGNIYDCDFNQMEDR--AACT--Sq--GQklTLPDL---LqagTLELIa---------EVQT 303 Microcystis aer...
WP_011715021 241 NPATVAGLMCRHQVSVRWDGVLFDCDFNLALDL--PARV--Sg--GA--RLGEV---T---VATLRs--R------RVVI 298 Magnetococcus m...
WP_012362404 254 NPQTLDYVMCRNQISVDYLGNIYDCDFNQMENItaTLPD--Gk--PL--TVETL---LkmgNLDVIn--D-------IKT 315 Cyanothece sp. ...
WP_011935161 253 NPCSVSGLMCRSTLSVSAKGELFDCDFNQMLEM--PL--------PL--NLASV---G---LDDLGg--R------EIIT 306 Synechococcus s...

ZP_01124275  295 ADHCFGCTAGQGSSCGGSL 313 Synechococcus sp. WH 7805
ZP_05035221  312 RPYCYGCTAGSGSSCGGSL 330 Synechococcus sp. PCC 7335
ZP_01853005  327 GQHCFGCTAGAGSSCGGAI 345 Planctomyces maris DSM 8797
WP_012307077 313 KPYCYGCTAGSGSSCGGAL 331 Synechococcus sp. PCC 7002
WP_011242909 318 RDYCYGCTAGSGSSCGGAL 336 Synechococcus elongatus
WP_011611612 309 ANYCYGCTAGCGSSCGGAL 327 Trichodesmium erythraeum
WP_004163457 304 ASYCYGCTAGSGSSCGGAL 322 Microcystis aeruginosa
WP_011715021 299 EQHCLGCTAGCGSSCGGAL 317 Magnetococcus marinus
WP_012362404 316 ADYCYGCTAgsgsscggsl 334 Cyanothece sp. ATCC 51142
WP_011935161 307 GNHCYGCTAGQGSSCSGat 325 Synechococcus sp. RCC307
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