Conserved Protein Domain Family
rSAM_cobopep

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TIGR04163: rSAM_cobopep 
peptide-modifying radical SAM enzyme CbpB
Members of this family are radical SAM enzymes that modify a short peptide encoded by an upstream gene. A role in metal chelation is suggested.
Statistics
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PSSM-Id: 200414
Aligned: 5 rows
Threshold Bit Score: 641.466
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011340163  26 LLPVSIDHPEYVALLDPDAAFWSLIQKDKLGEALcNESTFMQQFLSRRDEFLEEIDALRFGLKPSAVYFNPTDRCNLNCS 105 Pelobacter carb...
WP_011384200  16 LQTFEIGHADYTALIDADNAFWALVRKDEMERVL-DNGALERDWRAKREDFAREMDMLRFHLKPSAVYFNPTERCNLDCS 94  Magnetospirillu...
WP_011286183  15 FQALDIGHPLYAAVTDPQTAFWALVDKTRIHEAG-RDPALLAAYGAMAELFSRELHALRFGLKPSGVYLNPTERCNLNCT 93  Dechloromonas a...
WP_011699304  22 LAVLDFGDPNRVAVVEPDLAWWALVERHALGNAL--AGELVGDLRARADSFREEMGHLRFGLKPSAVYFNPTDRCNFNCS 99  Syntrophobacter...
WP_010879693   2 LKELEVNGKRF--FLAPESNFWAIGEREEVERF----------YRERKDALLEEMQRYRFEVDIRTAYINPTESCNRNCP 69  Archaeoglobus f...
WP_011340163 106 YCYIPEDMRSDGKTMTPDELIKALGILKEYFKTTVPEGLKPQIIFHGAEPMMAREAVFAGIDAYLDDFRFGVQTNGTLLD 185 Pelobacter carb...
WP_011384200  95 YCYIPQTMRRSGEHMSRDRLMEAMARLDEYFSRTMPEGRKPQIIFHGAEPLLNRDAMFEAIDSYSDRFRFGVQTNATLLD 174 Magnetospirillu...
WP_011286183  94 YCYLPDSQRSSGSHMPVETLLASLGKLRDYFRSVMPADRKPRAIFHGAEPLMNQAAVFAAIDAFADDFVFGLQTNGTLLD 173 Dechloromonas a...
WP_011699304 100 YCYLPEELRRNGKTMTPEEVCSALERLKSWFCGIMPAGARPQLIFHGSEPLMAKEAIFAGMERFRDDFTFGIQSNGMLLD 179 Syntrophobacter...
WP_010879693  70 YCYIPAEIRERGTKMSYEKLEEIL--------TVLAENGVERVIFHGAEPLMVKDEIFRAMEDF--DFKYGIQTNATLLE 139 Archaeoglobus f...
WP_011340163 186 DEAIEFLTSRNIGIGLSLDSHLEEICTRTRKTWEGDSVYAHVVRAMNKLKGYANFNVICTVTQENMDKLVEMVDFFHEHE 265 Pelobacter carb...
WP_011384200 175 AVTAEFLTSRGCGIGLSLDAPTPEVADRSRKRWSGDGVFASTVDAIRRLKGYAGFNVICTMNRENLGQLTEMVEFLHAEE 254 Magnetospirillu...
WP_011286183 174 DAALDFLTSRNVSIGLSLDGPVAGITDATRRTWGGKSVHDKVLRAMEKLRGYGSWSVITTCTTENLPYLTHMVELFHANE 253 Dechloromonas a...
WP_011699304 180 DEAIAFLKDHGVGIGVSLDAPTADVANLTRRNWSGTGGFERVSEVIEKLASYPAFNVITTVTRGNVHTLPAMVDFYHQRG 259 Syntrophobacter...
WP_010879693 140 EEDAELLMKKGASVGISLDSPYKETNDYLR----GKGHYDAVMRALDFFDGYRSLNIIMTVNKHNFQHLPAMVDFL-AGK 214 Archaeoglobus f...
WP_011340163 266 VPICMLNQVRCTRQGARDIKPLDHEMAKYYLKALDRTYELYQKTGRKLVVANFANVLVSVVAPAARRLMCDISPCGGGRC 345 Pelobacter carb...
WP_011384200 255 VPACMLNVVRCTQPGGQDSWAEDQAVSKAYLAALDRSHQLYRETGRKLVVANFVNILISILAPTARRLMCDISPCGGGRS 334 Magnetospirillu...
WP_011286183 254 VPTCMLNTLRCTLPGARGVKPADGDMGKAFFAALDRTYELYQETGRKLMVANFANILIGILAPTARRLMCDISPCGGGRA 333 Dechloromonas a...
WP_011699304 260 IATVMFNPVRCTQQGGRDLKPSDRVLAERFCRALDRAHELYVETGRKLVVANFANVLAGIIGPTGRRLMCDISPCGGGRC 339 Syntrophobacter...
WP_010879693 215 VSVMLANPVRGTSPGGRELRPPEG-FEDYYIKAIDRAIENTKS-GRRIVIGDFANILLGLVAPTSRVLQCDISPCGGGRR 292 Archaeoglobus f...
WP_011340163 346 FFALSASGDMFPCSEFVGVERFKGGNLYTDNIDEVLQTEAFRAVTERVVENIDPCKTCAIRHFCGSPCPAEAHEMNGGQN 425 Pelobacter carb...
WP_011384200 335 FFALAPDGSLFPCSEFIGLPAFAGGNLFTDTVEDVLESPAFKLVTGRKVEDIKACSTCPVRHFCGSPCPAEAHEANGGME 414 Magnetospirillu...
WP_011286183 334 FFALAADGSLYPCSEFIGLPRFNGGSLLTGGVEAALDSAAFREVTTRDVDRFSPCGDCAIRHFCGSPCPAEAFEMNGGMD 413 Dechloromonas a...
WP_011699304 340 FFAVSAQGDVFPCSEFIGFQEFKGGNLFRDDLSGILESAPFRAVTGRKVEEIVPCAGCAIRHFCGAPCPAEVKAVSGTLN 419 Syntrophobacter...
WP_010879693 293 FFAVSADG-IYPCGEFIGMEEFRANLSALSDWSSLIEK--FEVVRKRTVEQIEECRNCEFRNLCGAPCPAEIYAESGTML 369 Archaeoglobus f...
WP_011340163 426 VPGAFCELYEEQVRYALRLIAEGKEDIYL 454 Pelobacter carbinolicus
WP_011384200 415 QIGAYCGFYLDQAQYAFRLIADGIAEDYM 443 Magnetospirillum magneticum
WP_011286183 414 KIGAFCDFYKEQVNYALRLIADGKADDYL 442 Dechloromonas aromatica
WP_011699304 420 APSPYCAFYEEQVRYAFRVIAAQREDAYL 448 Syntrophobacter fumaroxidans
WP_010879693 370 RKSPYCEFYKKLALKAMDVIARGDVRNVL 398 Archaeoglobus fulgidus
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