Conserved Protein Domain Family
cyano_PEP

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TIGR04155: cyano_PEP 
PEP-CTERM protein sorting domain, cyanobacterial subclass
This domain model describes a subclass with family TIGR02595 of PEP-CTERM protein sorting signals associated with bacterial exosortases. This subclass is restricted to Cyanobacteria, including the genera Cyanothece, Nostoc, Trichodesmium, Lyngbya, Arthospira, etc. This PEP-CTERM subclass features strongly conserved residues within the transmembrane region, including a Gx4GxG motif. Model TIGR03763 describes a corresponding cyanobacterial form of exosortase found in most species with this domain.
Statistics
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PSSM-Id: 275017
Aligned: 69 rows
Threshold Bit Score: 38.5848
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01618692  213 APEPLTILGTGMALGFGGLFRKEQQ 237 Lyngbya sp. PCC 8106
ZP_01619384  224 VPEPMTILGSLVALGMGALLKKHRS 248 Lyngbya sp. PCC 8106
ZP_05023695  229 VPEPLTILGSGLALGFGALFKKQQS 253 Coleofasciculus chthonoplastes PCC 7420
ZP_05035129  215 VPEPITMLGSGAALAFGALMKRRLS 239 Synechococcus sp. PCC 7335
WP_011318214 125 VPEPSTILGLFTALGCSVTIRRSRK 149 Anabaena variabilis
WP_015955179 151 VPEPLTMSGVAIALGFGTLYkrakh 175 Cyanothece sp. PCC 7424
WP_015954307 428 vpePSSILGALTALGGGTWLKRQRK 452 Cyanothece sp. PCC 7424
WP_012413073 143 VPEPTDIYGGPIALGFGWLMKRKLK 167 Nostoc punctiforme
WP_010999371 171 VPEPITMAGLALGSGFGVLLRRKYK 195 Nostoc sp. PCC 7120
WP_012164596 179 VPEPSTILGSMMVLGVGTLLKRTAK 203 Acaryochloris marina
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