Conserved Protein Domain Family
rSAM_FibroRumin

?
TIGR04136: rSAM_FibroRumin 
radical SAM peptide maturase, FibroRumin system
Members of this protein family are radical SAM enzymes proposed to act on small, Cys-rich peptides encoded by tandem gene pairs. Members occur in enzymes Fibrobacter succinogenes subsp. succinogenes S85 (genes for their target peptides missed) and in Ruminococcus albus 8. This enzyme family is similar in sequence to the SCIFF (Six Cysteines in Forty-Five) system maturase (TIGR03974).
Statistics
?
PSSM-Id: 200387
Aligned: 2 rows
Threshold Bit Score: 938.233
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
ZP_06719711    4 ISRFTHKYEVGDAVALYHSLRMKPVYLSRDTYESLQTWIASSCCNQISDAPESIAKEVAELARWKILTQSEDEDDKVLRF 83  Ruminococcus al...
WP_014545692   3 FSRYTHKFFVGSDVALYNSLRMKPVFLTRDKFKQVETFLGEVSDRQPVVVPFEVEQEVQELLKYKILIDSPEKDEKMLSF 82  Fibrobacter suc...
ZP_06719711   84 VKSRMPKPAISICYFILSEQCNLACKYCFLGNNDKEKRHNFSSENMTTETADKAIEFFIRQMKASGLDSeDNQAAIIFYG 163 Ruminococcus al...
WP_014545692  83 VKSKLSEPEISVCYFILSEQCNLACKYCFLGNNDKERRKNFAKELMSKEIAEKGVYFFLKQLESVEYNA-NRKPVVIFYG 161 Fibrobacter suc...
ZP_06719711  164 GEPMVNYPVLKYVANKINSLRSTEKCLKNAELSMVTNGLLLTEERIIELRDLGVSIAISIDGVTEEANAMRVDVAGNPVF 243 Ruminococcus al...
WP_014545692 162 GEPLMNFETLVYVVEKFNSLKSEHKVLENIEFSMVSNGLLLSEKRLLQLRELNVSIAISIDGCDEASNAMRVDLNGNIVF 241 Fibrobacter suc...
ZP_06719711  244 SRILETLDKCKKLGVNVSLSVTLSEETVKDTQNVLKLIDEYGIKSLGFNIMMSSDTFVLPQSYNELAAQFIIDEFVELRK 323 Ruminococcus al...
WP_014545692 242 PKIVKTLDIAKELNVPVSLSITLTEETIKRQSDVIDLIKKYNVKGLGFNIMMGDHRYPLPADYNDKAAQFIIDVFKQLRE 321 Fibrobacter suc...
ZP_06719711  324 RGIYEDRMMRKLKAFTKASVYFSDCGATGGGQIVVSPNGQVGICHGCLFDKKYFVSNISDDDFVAIDDPTFIEWSKLTPL 403 Ruminococcus al...
WP_014545692 322 IGVYEDRIMRKLKSFAKAQVYFSDCAATSAGQIVIAADGAVGICHGCLSDRNYFNSCVDDLDFNPRENPVWQEWNHLSPI 401 Fibrobacter suc...
ZP_06719711  404 NNEECYSCPALGICGGGCPINAMNLKPGNTIHSIDERFCVHSKKTLEFFINDLYRLIT 461 Ruminococcus albus 8
WP_014545692 402 EKDECQDCEALGICGGGCPINAMGEHEGNTIHSLDERFCVHAKKTLEFFIGDLHRVVT 459 Fibrobacter succinogenes
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap