Conserved Protein Domain Family
Bac_Flav_CTERM

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TIGR04131: Bac_Flav_CTERM 
gliding motility-associated C-terminal domain
This model describes a protein homology domain unique to, and greatly expanded in, the Bacteriodetes. Species in this lineage include several, such as Cytophaga hutchinsonii and Flavobacterium johnsoniae, that exhibit a poorly understood rapid gliding phenotype. Several members of this protein family are found in operons with other genes whose loss leads to a loss a this motility. Proteins with this domain frequently pair with members of family TIGR03519, whether one such pair or many occur in a genome. More than 30 members may occur in one genome.
Statistics
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PSSM-Id: 275004
Aligned: 68 rows
Threshold Bit Score: 104.512
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01733826   811 VKFPRYFTPNGDGINDYWKLYGPinD-YYSSAE-LVVYDRYGN-LLHTMNfiEN-NTGWDGTFNNKKLPATDYWYKIVFK 886  Flavobacteria...
ZP_01048961   689 IGFPTYFTPNGDGINDTWKLEGArqD-LTTTVR-FIIFDRFGK-KLYQSR--AM-GNGWNGKYKGATLPRNDYWYLVELQ 762  Dokdonia dong...
ZP_01050909   795 RGAPKFFTPNSDGYNDTWHVINA--Q-NYPGLT-VEVFDRFGK-QMTSLT--SN-SPGWDGTHNGKKLETNTYWYKITYE 866  Dokdonia dong...
ZP_02163569   799 GGFPKFFTPNGDNINDTWQLLQK--E-YYPNAT-IELYDRYGK-NLNYIK--AD-SE-WDGTYKGVPLPSGDYWYKLTLE 869  Kordia algici...
WP_011710596  530 VGYPRFFSPNSDGYNDTWNLITD--S-FITIKK-LYIFDRYGK-LIRELN--PNqGKGWDGTYNGKPLPSDDYWFKVEFI 602  Gramella fors...
WP_013186975  680 LNFPKFFSPNGDGFNDVWSVLNA--DrNNPVVKhIYIFDRYGK-LLTTLN--SA-ASAWDGTFNGKALPASDYWFLAEFI 753  Croceibacter ...
WP_013073174  518 VGYDFFFTPNGDGYNDRWSVTQD--A-DYKVLK-IRVFDRNGV-FLKNID--PD-GEGWDGLVNGKLLPEDDYWFNLEYV 589  Zunongwangia ...
WP_015754253  492 EGFPNFFTPNGDGRNDRWQFILPesG-ISPVRE-ISIFDRYGN-LIARVD--PQ-SDGWDGTLRGNPLPPSDYWYRAVDN 565  Robiginitalea...
WP_015755267  805 GGLPNFFTPNGDGKNDRWEFHNA--A-YFGPYQ-LQIYDRFGN-LVGQMS--DS-DPGWDGNRMGSPLPASDYWYRLHLE 876  Robiginitalea...
WP_015806320 1249 FNVSNSFSPNGDGKNDTWKVGGL--E-NYPNSE-ITVLDRWGNaVLNKVS--TG-SFEWDGKLNSRPLPTGNYWYQIKVS 1321 Flavobacteria...
ZP_01733826   887 D-Fnn-ntFEKKGHFSLTR 903  Flavobacteria bacterium BAL38
ZP_01048961   763 D-G-----RIFRGHFSLLR 775  Dokdonia donghaensis MED134
ZP_01050909   867 E-------RTTYGFFTLIT 878  Dokdonia donghaensis MED134
ZP_02163569   870 N-G-----RIIKGNVTLKR 882  Kordia algicida OT-1
WP_011710596  603 D-EktgdhREYMSNFTLMR 620  Gramella forsetii
WP_013186975  754 D-G-----FQYRSHFSLIR 766  Croceibacter atlanticus
WP_013073174  590 NfKts-srHNFSAHFSLIK 607  Zunongwangia profunda
WP_015754253  566 Q-G-----GVVTGHFTLKR 578  Robiginitalea biformata
WP_015755267  877 T-G-----REVTGHFALIR 889  Robiginitalea biformata
WP_015806320 1322 D-G-----RILNGWLLIKN 1334 Flavobacteriaceae bacterium 3519-10
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