Conserved Protein Domain Family
CXXX_rpt_assoc

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TIGR04116: CXXX_rpt_assoc 
CXXX repeat peptide modification system protein
Members of this protein family occur strictly in the presence of a peptide modification radical SAM enzyme described by model TIGR04115 and some small peptide in which, for a stretch, every fourth amino acid is Cys. Cysteine residues usually are flanked by residues with sterically small side chains, as with many radical SAM-modified peptides. Many of the latter are recognized by model TIGR04114.
Statistics
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PSSM-Id: 274991
Aligned: 12 rows
Threshold Bit Score: 67.8032
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_06076787    4 IVGKVTAEEKNEIQTLFERRNGLNELAKIV------TSDNNE---LYERLVKDLGETGTKFQNWWNRMGEKYQWESIDGS 74  Bacteroides sp....
ZP_05494134    5 KVGLVTQEEKNKVQELHERILGLEELLISFsnksniQEAKNE---LYEKVVKDIGETKRKLQVWWDEMYEKYNWKTVKNG 81  Clostridium pap...
ZP_05496040    5 VVGIVTEEEKNEMLVLFERKLGIEELAATLesdllsAEQKET---MQEKMITELGKVKYHMQAWWDKMYEKYTWKNIDGH 81  Clostridium pap...
ZP_03930782    3 EVGTLTQEECSHIEELLEKKIALENLLKIL-------SERQK---IYKKVNRDYKNIVEEYEKWWRDTSEKYMWESTENS 72  Anaerococcus te...
ZP_05494160    4 TVGIVTEEERNEIESLFEKKCALENLMKIVd-----VNENEP---LYNKIISDYGVVIKQFDRWWKVTSQKYQWE---GG 72  Clostridium pap...
ZP_02632413    5 KIGKVNIGEKRAMEKIYNKRAALDELIFTIc-----KESSPE---LYKKVSDDLNNAINEYNNWWKNISEKYNWIIGKDE 76  Clostridium per...
ZP_02613669    5 ILATVTEEERDVVEELYERIYSLKSFIRLLsekklePNEQNF---LYKKILNDWYDTKKRYDYWWQNTVQKYNLSKNDIE 81  Clostridium bot...
ZP_02995801    3 IETKILESERDEVQMLFERLASLNALAATLsdarleIDEQNW---FYNKLINDLTETRKKFGIWWDRSCEKYKLNLEDRH 79  Clostridium spo...
ZP_02613671    5 ILVKIKNEETNIIQNLYDKIYYLKQLESLFn-----KDEENW---FKTKLSQDFDDIDKSISNWWQDITSKYNLDNTIIE 76  Clostridium bot...
ZP_07094855    5 RNIELTSEEVKNLMIRVQKFNSIRTIDLIIrnnpniVGEFDMdesIFANVETELLYADKNCRKWWNEICEKYKLQKDLG- 83  Peptoniphilus s...
WP_011418762  21 KIGKVTPRERDEISALFERKNGLTELIKALvesgdeILTNSY---FYEKIVADLGKTTTLHQQWWDRCAQRYQWERVSGC 97  Syntrophus acid...
WP_011986334   8 DNLIITESERNKLEEIIEKIASLKNIYNMVkdn-ssAIEFNI---NIESLENEIKEEQASYNEWWDDIYIKYNLDIN--E 81  Clostridium bot...
ZP_06076787   75 NWEIDFDTCNIYL 87  Bacteroides sp. 2_1_33B
ZP_05494134   82 NWHIDFLTNEFFL 94  Clostridium papyrosolvens DSM 2782
ZP_05496040   82 KWNIDFQTCEIIL 94  Clostridium papyrosolvens DSM 2782
ZP_03930782   73 FWSIDFKSRKVYL 85  Anaerococcus tetradius ATCC 35098
ZP_05494160   73 NWSINFESREIFM 85  Clostridium papyrosolvens DSM 2782
ZP_02632413   77 YLILDFNTCDVIV 89  Clostridium perfringens E str. JGS1987
ZP_02613669   82 KLYMDFGKMQIYP 94  Clostridium botulinum NCTC 2916
ZP_02995801   80 KYAVDFENKTIVI 92  Clostridium sporogenes ATCC 15579
ZP_02613671   77 KYYLSFEDSTIYL 89  Clostridium botulinum NCTC 2916
ZP_07094855   84 -FRVDYESCVLTL 95  Peptoniphilus sp. oral taxon 836 str. F0141
WP_011418762  98 IWEIDFETCNIYL 110 Syntrophus aciditrophicus
WP_011986334  82 KYILMFEECTLKK 94  Clostridium botulinum
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