Conserved Protein Domain Family
rSAM_pair_X
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TIGR04100: rSAM_pair_X 
radical SAM enzyme, TIGR04100 family
Members of this protein family are radical SAM enzymes that appear paired with members of TIGR04002, a family of small (~170 residue), mostly hydrophobic protein. This family of radical SAM enzymes belongs to a larger family TIGR04038, in which some members show regularly in contexts with TatD.
Links
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Statistics
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PSSM-Id: 188615
Aligned: 9 rows
Threshold Bit Score: 351.302
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
ZP_06470414    2 TITYPVHDGLYVNVTNRCPDHCTFCIRNEGDGAYGSGSLWLEREPSVEEIVDAIFANDLSKYKELVFCGYGEPLERLDAV 81  Ethanoligenens ...
ZP_06145266    6 TISYEVGNNLYLNFTNKCPCACTFCIRNHADGAYGSDPLWLEHEPTMDEIKADLDKRDLTKYDEIVFCGYGEPTERLDAV 85  Ruminococcus fl...
ZP_06720491    7 TISYELWGKLYLNITNKCPCACTFCLRQNDDGAYGSDPLWLEHQPTLEEVLANLKTRDLSSYEEIIFCGYGEPTSELDIL 86  Ruminococcus al...
ZP_06883680    2 TIIYQIENSLYVNLTNKCPCSCTFCVRIDHDTVGQNDNLWLPHDPSLEEILDDLKNYNLDSYDQIVFCGYGEPLTRIETV 81  Clostridium len...
ZP_02212383    2 TLLYPIGKSLYVNITNLCCCKCVFCVRDITDSVGGSDSLWLDHEPTIDELKAELEKFDLDDYEEVVFCGYGEPLMRINEV 81  Clostridium bar...
ZP_02423468    2 TIFYEFEGKLYANITNRCPCSCIFCIRKNGDSVADNDSLWLEHEPSYEEIIKAFDDFDKTGLHELVFCGYGEPMERADVL 81  Eubacterium sir...
ZP_04856312    4 DIIYRYKNQVYFNITNKCPCRCTFCIRNTEDAIGEASNLWFEHEPALEEIYKAIDEFDFSDCNEVVFCGYGEPTMALENL 83  Ruminococcus sp...
ZP_02441825    3 DILYTYGKNLYVNLTNRCPCNCTFCIRSQKQGLGSAETLWLDHDPSADEVIAAFQAYRLEVFEELIFCGYGEPFCALDNM 82  Anaerotruncus c...
WP_012741245   3 DIIYTYKNEVYANITNKCDCACTFCIRSQKDAIGDATTLWHKVDPTYDEIIAAIDAFDFTGYEEFVFCGYGEPTCALDIL 82  Eubacterium rec...

ZP_06470414   82 KDVIRRAKEKaPGLPVRINTNGLADLIHGRATAKELAGLADAVSISLNAPDAATYQHYCRSDFGr-AAYDAVLAYARDCM 160 Ethanoligenens ...
ZP_06145266   86 IEAAAFLREK-GCKKLRINTNGLGDLIHGRSIADELCTAMDVVSISLNAPTEKDYMDVTRPRFP--DAFSALRNFTRDCV 162 Ruminococcus fl...
ZP_06720491   87 LETAKYIRSV-CDTPIRLNTNGLANLIHGRKTEPDFKGLIDTVSISLNASESEAYMAITRPKWKdkDCFAELLSFAKDMK 165 Ruminococcus al...
ZP_06883680   82 IEVCKYIREK-SKIKIRVNTNGLADLIHNKPTAELLEGYVDAISISLNAPNKEAYLKVARPRFGi-ESFDALLKFATDCK 159 Clostridium len...
ZP_02212383   82 VEFATYIKSK-KDIKIRINTNGLADLIHKKKTAVMLKDVIDAVSISLNAPNKEVYLEVARPAFGi-KSFDAMLSFAKDCK 159 Clostridium bar...
ZP_02423468   82 LEVAKYVKQT-TDMKIRINTNGLVDFINPAFDSYKMRYIIDCISISLNAPDPESYLEVSRPKFGl-PSFNSMLNFAATVK 159 Eubacterium sir...
ZP_04856312   84 IAVSKYIRER-YPFRIRLNTNGLSDLIHKRSTAEEICQAVDSISISLNMPDAASYNEVVRPAYGe-KSFDAMLKFARDCK 161 Ruminococcus sp...
ZP_02441825   83 LAVCRYIRSV-SDIKIRVNTNGLGDLINGRETPPLLIGLVDTVSVSLNAPDAQSYLEVTRPSFGi-QSFDAMVDFAARCK 160 Anaerotruncus c...
WP_012741245  83 EKTAKYVKEK-YKLPIRVNTNGLGNLYHGRDIVPELAEYIDSVSISLNAANAEEYNKVTRPTFD--NAYEAMLDFAEECN 159 Eubacterium rec...

ZP_06470414  161 RYIP-SVTMTVLD-LLTPAQIEESRAIAASIGAKFRVRAYE 199 Ethanoligenens harbinense YUAN-3
ZP_06145266  163 KTGKaEIIMSVVD-VIPQEQIEASRKVAEELGAVLRVRTFD 202 Ruminococcus flavefaciens FD-1
ZP_06720491  166 QYVP-NVVLTVVD-VIGEEEIAKSQKVADSVGVKLRVRPLE 204 Ruminococcus albus 8
ZP_06883680  160 KYIG-SVTFSVVDkVISKEQIEASRKLAEEMGIGLRVREYI 199 Clostridium lentocellum DSM 5427
ZP_02212383  160 TCLK-EVCFSVVD-EISEEEIRKSQELADSLGIPLRVRVKN 198 Clostridium bartlettii DSM 16795
ZP_02423468  160 TIVP-EVMFTVVD-IIKPEQIEQCKELAEGLGIPLRVRHWV 198 Eubacterium siraeum DSM 15702
ZP_04856312  162 QYLD-DVRFTVVD-VIGEEKVEQSKILAAQNGIPLRVRKYS 200 Ruminococcus sp. 5_1_39BFAA
ZP_02441825  161 AASL-NTVFSIVD-VLPAEEIEACKRLSEQTKIPLRIRHFS 199 Anaerotruncus colihominis DSM 17241
WP_012741245 160 RMIK-HTQLSIVD-VLPEEDIKTCQQIADERGIHLKIRHFS 198 Eubacterium rectale
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