Conserved Protein Domain Family
exp_by_SipW_III

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TIGR04089: exp_by_SipW_III 
alternate signal-mediated exported protein, RER_14450 family
Members of this Actinobacterial protein family contain the cognate signal peptide domain, modeled by TIGR04088, for the variant SipW form of the signal peptidase I family. The remainder of this protein, however, differs from families such as Peptidase_M73 (pfam12389) and YqxM (TIGR04087) that share the same signal peptide domain. Some additional homologs to this family lack full-length homology and are excluded by the trusted cutoff as set. The two known targets for export by the SipW signal peptidase in Bacillus subtilis act in producing biofilm matrix material.
Statistics
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PSSM-Id: 274972
Aligned: 14 rows
Threshold Bit Score: 78.2393
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01129380    1 MNKLVKGSIAGAAGIALLLGGAGTLATWNSAVTVAA-PgSISAGTLDIVATTGAAd-gWK--LG------S---AATVAS 67  marine actinoba...
ZP_06832269    1 MNKKTKGAIAAGAAAALLAGGAGTFATWSDSKTLDA-G-TVTAGKLQFTGTPAGE---WYkgTD------TsatGTKITD 69  Rhodococcus equ...
CBH47069       1 MNKKTKGAIAAGAAAALLAGGAGTFALWSDTETVTG-G-TINSGTLEFVGTTAAGt--WY--DG------A----TAISD 64  Rhodococcus equ...
ZP_07716131    1 MKKSTKGALAAGAAAALLLGGAGTLAFWTADGVADG-G-SITAGTLTLTDGTCDPe--FVyaDG------A-----ASEG 65  Aeromicrobium m...
ZP_06829332    1 MNRKAKAALAAGAAAILLLGGAGTFAFWQDQTESGG-G-TITSGTLALSECTPTSgsgWRdvTG------G---RSVAVD 69  Rhodococcus equ...
WP_012877645  57 DRTVLKGAVAAGAATAILLGGFGTFALWQASTAAGTsG-TLASGDLALGTPATGE---WRlvESdgvygeD---GAVVED 129 Xylanimonas cel...
WP_012037936   1 MNKIVSGAVAGAAGIVLLLGGAGSFALWNANATVAA-S-SVSSGNLALAADTAGV---WTdiTN------G---GSKVID 66  Clavibacter mic...
WP_012246348   1 MNKVAKAGIAAGIAGLLLLGGGTTWALWQDNKTVDA-G-QVNTGQLKLALGTAGS---WKdvSS------Dv-tGATAID 68  Renibacterium s...
WP_013350216   1 MKKTTKGALAAAAAGFLLLGGAGTIAYWSDSSTISG-G-TVNTGNLALSDAACSEn--WLyaPG------N-----SGAG 65  Arthrobacter ar...
WP_011757664   1 MRKSTKGALAAGAAALLLFGGMGTRAGWSDDGTFTG-T-DIGTGHLNLINATCNG---WKi-------------GASAFD 62  Nocardioides sp...
ZP_01129380   68 PAGFKIVPGDTVTYTKTFNVTATGDNLSAGIALGTLAIAPANSATAVDTALAaalt-ksaaFTVNGVTATSISPAVGTQP 146 marine actinoba...
ZP_06832269   70 IATYRVVPGDVLTYKATADFIAQGDNLNATLSLDETAAGSFSGLTWGATSVS---------ATGVDGSGVITPNDGTVRS 140 Rhodococcus equ...
CBH47069      65 IANYRIVPGKTLTYKASPTIHAEGNNLSAKVTAS-----AGADATGALLPHLtigt-ptvtGTGVGAGGVIT-PQAANQT 137 Rhodococcus equ...
ZP_07716131   66 DDVVLFVPGDIVTKDCTFEIGATGDNLEALLAAPDTVTFETDS-GEVLTATVdtty-tiggDPAADGDTITSADDGAEVV 143 Aeromicrobium m...
ZP_06829332   70 LPDFRIVPGDTLEYSCTSTVTASGTNLSATLAADTSEMFSELSDPALQAQLIdtsl-tattSSGAVLPDAQVTDQNDGET 148 Rhodococcus equ...
WP_012877645 130 ISAFVASPGDVLEYSTAVPVTVKGSDLKAKLTV-----------SGGETFIApaat-eyvtVTINGQDALDVLPHDGEQP 197 Xylanimonas cel...
WP_012037936  67 PATYRIVPGNVLQYTSALTVTATGDSLAADLTYNPVSITGDAALKAAITTKLdvtstdasiTPASAANTFTVKPSTSASK 146 Clavibacter mic...
WP_012246348  69 LTTFKLVPGDTVKFVQILTITADGKNLKGSLTIDPSSINTAIPAAWQPYVTVtvap-eslpSGLTNTAGVISFAAPGSYT 147 Renibacterium s...
WP_013350216  66 DPVSLLVPGDAITKECTFTVSATGDNLTATLNTPDSALITAEG-TDTFEASVaaty-nlagSPVTEDTPITDANDGQTLT 143 Arthrobacter ar...
WP_011757664  63 PATIKIVPGSVLTQVCTFEVDAVGTNLKATLSVTAPSFATANGLTGVLTTAAtyvn-nadsSPIDATTQLAD-----GTV 136 Nocardioides sp...
ZP_01129380  147 VVVTVTITY--------------PKSTTAGA-----E--NtsklGAVSLSNFSVTLTQ 183 marine actinobacterium PHSC20C1
ZP_06832269  141 AVVTKTATFa-------------ASTSGTTS-----Q--G----ATAALNGLQLKLTQ 174 Rhodococcus equi ATCC 33707
CBH47069     138 VEVSVPVTFk-------------SDVTGTTG-----Q--G----AQAVLSTITLTLEQ 171 Rhodococcus equi 103S
ZP_07716131  144 VTFLVDIDYgtaddpfgsaapttPGVNGNLT-----Q--G----ITAALDDLTVTLTQ 190 Aeromicrobium marinum DSM 15272
ZP_06829332  149 LTIAARLTFd-------------PKTSGTIA-----Q--G----TSVTLNNVLITLTQ 182 Rhodococcus equi ATCC 33707
WP_012877645 198 LEVAVRVEFs-------------SSTPAGVA-----QdlD----TLVSLDDVTFTLEQ 233 Xylanimonas cellulosilytica
WP_012037936 147 VNVVLTVTFp-------------S--AATTG-----Q--N----GTLSFDKLAFTLTQ 178 Clavibacter michiganensis
WP_012246348 148 FDVGSTVAFa-------------KGANASGTddetiE--N----QSANLNGLALKLQQ 186 Renibacterium salmoninarum
WP_013350216 144 ATVTVTFPFgd-----------eAAVNANDT-----Q--N----VTASLNDIAVTLVQ 179 Arthrobacter arilaitensis
WP_011757664 137 IKATMTVTL--------------PASADNTI-----Q--G----LTATLDNVTVTATQ 169 Nocardioides sp. JS614
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