Conserved Protein Domain Family
rSAM_for_selen
?
TIGR04082: rSAM_for_selen 
selenobiotic family peptide radical SAM maturase
Members of this protein family are radical SAM (rSAM) enzymes similar in sequence to others with known or postulated roles in peptide modification, and regularly found adjacent to members of the GSU_1558 peptide family described by model TIGR04081. GSU_1558 and several other members of that family appear to be selenoproteins, hence the term selenobiotic.
Links
?
Statistics
?
PSSM-Id: 274965
Aligned: 9 rows
Threshold Bit Score: 801.194
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
ZP_05313266    9 IFPRSLALLGRKALKELLG--GQDQEPAGFPDLLDQKGRP-GIPPYLSGLARIELARHLALTAADIEAPET--LSLNPTL 83  Geobacter sp. M18
ZP_01290175   11 IFPACHRLLAPEVWAQLAKelGDDQSWQHLPDLLHSRTATlALPPCLGELAELEAALQKCREMQGLVPATVteKTLNPTL 90  delta proteobac...
ZP_07017337   11 IFPACKSLVTRQAWSALVArmDTKPGPEKFPAMISSLSHKlELPEYLAELAELETALYSCLQLADQVPSSVhqKMINPSL 90  Desulfonatronos...
WP_012174318   7 VYPASRRLSGDHFFSRCLE--KCGDHPEALADVMARLTGEyGLPSYLTELARLEYALFRAGSAADQIPSQVseITINPTL 84  Desulfococcus o...
WP_012505536   7 RFPHTCRLLGDEHLAMLTCntDQESGPWPEPRLFGVASSDaYPEPFFGDLSAVESAYDAVRQRTHDLRPPEhgAVINPLL 86  Prosthecochlori...
WP_011699306  12 TYPACGEFLDDEAWASLQRtrDNVMDVAAFPKSLSRLVRElALPAFLPELARLEFAFHTVSNVDVEASRPAceLAVNPAL 91  Syntrophobacter...
WP_012474684   8 IFPRTLGYLDDAQSMHVLG-----KSPDAFADAIRSDVSFfPKAAFLADLADVEFACWNVERMHQEFNRPSrgAVINPRL 82  Chlorobium phae...
WP_015751645   4 LFPATRQLLPEIFQRRL----DAAETSEAALALLDAGVQDaELLPYLPDLARLEQEAFTCARAAAPPHETTaeIALNPTL 79  Desulfohalobium...
WP_015773006   9 LYPVTASFLDAETLSNLEA--AHSKSAGTLLTAIAEISREgLAPFFLPDICALELAMEKVASKTVDQPGPAdgIIVNPSL 86  Desulfomicrobiu...

ZP_05313266   84 QLVTANWTNLPALCTGAKRRDLErVVPGDEIV-VT-WRASGARGVITRGASQGDLLAIKLVAEDIDPAHAAREAGVAVGT 161 Geobacter sp. M18
ZP_01290175   91 QILSFNWQGLSKALSLADDQEFA-PVSGPETM-LV-WFHPRLGRARAQPATDNLLLALKITAEKLPIGPTALERRLPVAN 167 delta proteobac...
ZP_07017337   91 KMLELHWKGLDKALERAGDPKIQ-PASQPELM-LV-WFDPASGCSRAQPADHRTLTALKIVSEDQPMGSTALEYKVNLAE 167 Desulfonatronos...
WP_012174318  85 ELLSFQWKNLCRLLTSGKEVH---PEAAEERV-LV-WVDPKTGKPLARPATNNDLLALKIVAERIPVEKAAGEGAILPGE 159 Desulfococcus o...
WP_012505536  87 DLVAVRYDVTPFFIEEPHDEITDiPVIEQEGW-IVvWKGPVSGRIYVEYADQQMLLVLKLLADG---EDALALKGKELLT 162 Prosthecochlori...
WP_011699306  92 ALLRLSWSNLASLLRFNVDGTDVfPENREEFV-LI-WRHPENGRITARPAHDEDLMALKLVAEQIPSREAASRAGVAVYV 169 Syntrophobacter...
WP_012474684  83 QIVPVTYDISICFNDSATGISGN--IEPDEGWiLV-WKGPETGTLYVEKADEQMLLALKVLSE-----EEHVSRGDQLNV 154 Chlorobium phae...
WP_015751645  80 CLVPSRWQGLSDLLNGGGGDEQAePSLAAETV-LI-WKDPVTAEVRVEPASTNMLLALKIAAEGLSAKEVALDNGLRPLD 157 Desulfohalobium...
WP_015773006  87 ELCVLHTSGCVDVIHGLSTERC--PVHGQEMI-MV-WKNRGMQKVTVAVAKPEDLAAIKIITDGVDPSSAETEANVTPGL 162 Desulfomicrobiu...

ZP_05313266  162 IDALLREAVRDGLLIRPPSRLRREPEI----AE---SAGTEYAAAEVFTLQWHLTQRCDLHCRHCYDRSDRSPFPFDRAL 234 Geobacter sp. M18
ZP_01290175  168 LHRLLERAGSKGLILTPESRLVRDPDRfi-pPE---KSFKRFLQPRVFTLQWHITQACDLNCKHCYDRSSRQPISLEQAF 243 delta proteobac...
ZP_07017337  168 LHRAVDQSASRGLILAPRTRLGRDPAIfq-pHD---KSFERFMHPRVFTLQWHITQVCDLNCKHCYDRSSRSPMSLESAY 243 Desulfonatronos...
WP_012174318 160 IWFRIRAAARKGLILTPPSAIVRDPAIfp-rDA---GLSPEIYTSPVFTLQWHITQACDLNCKHCYDRKESEPLPFDRGV 235 Desulfococcus o...
WP_012505536 163 YLDALDHAARKGIILKAHSLIARDVERss-dDK---ALSGRFLKASVFTLQWHLTNRCDLHCRHCYDRDQLSPLRLDHAR 238 Prosthecochlori...
WP_011699306 170 VDALLDHAVKRGLLLAPPSSIRRDPSNfp-vLPltgTTEEDFSSCSVFTLQWHITQACDLHCRDCRERDGRPELELSQAV 248 Syntrophobacter...
WP_012474684 155 INQAIDYAARKGIVLKAPYLVSRSLQGfp-mGN---NIPERYFTASVFTLQWHITNACDLHCRHCYDRERRSPLTAEQGL 230 Chlorobium phae...
WP_015751645 158 LQRLLRREVRRGSLIAPASRLVRDPRIvspdHP---WAWPRYARAPIFTLQWHVTQACDLHCRHCYDRSQRGHMPWTDAI 234 Desulfohalobium...
WP_015773006 163 VDILLGKAVDKGILLSPASLIRRKRQDfs-dSL---SIPEEHLSAEVFTLQWHITQDCDLFCRHCYDRSARANMAVDKAL 238 Desulfomicrobiu...

ZP_05313266  235 HLLDELADFCRRRFIRGQVSLSGGNPLLYPHFLDLYRAATERDLMVAVLGNACDRGALESILSIKMPVYFQVSLEGLERH 314 Geobacter sp. M18
ZP_01290175  244 RVLDELESFCDSRRVRGKVTFTGGNPLLYPHFDALYLETVKRGFPVSILGNPTSRRRMEELVAIQAPSFYQVSLEGLPEH 323 delta proteobac...
ZP_07017337  244 YVLDELEKFCTHNNVRAKVTFTGGNPLLYPHFDQLYLETVRRGFPVNILGNPASRQRLEQLLEIQTPSMYQVSLEGLREH 323 Desulfonatronos...
WP_012174318 236 AVLDDFTRFCMTRNVSGHISFSGGNPLLYPRFCDLYREASRRGFSLGILGNPTEPGRIEELIRIEKPAFFQVSLEGLAEH 315 Desulfococcus o...
WP_012505536 239 AVLDDFASFCHEKNVRGHICFSGGNPFLYPHFFALYAEAVDRGFATSVLGNVVSGAELERLTALIKPDFYQVSLEGLEPH 318 Prosthecochlori...
WP_011699306 249 GILDDFYEFCRNRGVRGQVSFTGGNPFLHPRFGELYRAAAERDFILAILGNPVERRRIEELVAIERPIYYQVRLEGLRER 328 Syntrophobacter...
WP_012474684 231 AIIDDFDRFCQEKNVRGHVCFSGGNPFMSPHFFLLYRSAVDKGMATSLLGNPVSAEELQRVIDIRMPDYFQVSLEGLEEH 310 Chlorobium phae...
WP_015751645 235 AVLDSLDHFCRTHHVQGQITFTGGNPLLHPHFTELYREASARGFILAILGNPCQRKILEDLQAIQPLGGYQISLEGLEEH 314 Desulfohalobium...
WP_015773006 239 DVIDDFHSFCRDRHVRGQISFSGGNPLLYPGFLEVYERAARKGFAVAILGNPTTRETMDSILKIARPEYFQVSLEGLPAH 318 Desulfomicrobiu...

ZP_05313266  315 NDEIRGAGNFRRTVAFLKMLTGMGVPNMVMLTLTKHNMEQVLPLAEVLEGVTDGLAFNRLALFGEGAALQLPSPEEYARF 394 Geobacter sp. M18
ZP_01290175  324 NDRVRQAGYFDRVLAFLPILQDLGIPSQVMLTLTRDNMAQVLPLGEILRERTDLFTFNRLSAVGEGAQLLMPSPEDYQTF 403 delta proteobac...
ZP_07017337  324 NDFVRQPGYFDRIMEFLPLLRELGISSQVMLTLTRDNMDQVLPLGEHLRDMTDLFTFNRLSAVGEGASLLMPSYAGYESF 403 Desulfonatronos...
WP_012174318 316 NDYIRGPGHFERTLAFLEVLRDLGVFSMVMLTLTRDNMDQVIPLAEMLEGRADLFTFNRLAQVGRGKDLLLPEKTAYLSF 395 Desulfococcus o...
WP_012505536 319 NDFMRGEGYYRRVLAFLDLLREHGIYSVVMLTLTGSNIDQVIPLAREVSGRADYFTFNRLAQVGEGSDLSLPDKDRYREF 398 Prosthecochlori...
WP_011699306 329 NDSVRGTGHFDNVLEFLEILRDLDIYSMVMLTLTRDNMGDILPLAELLRGWADLFTFIRLSRSEDGPNPDLPALEDFAAF 408 Syntrophobacter...
WP_012474684 311 NDYIRGEGYFSRVMAFLDLLREKQVSSAVMLTLTQANIDQILPLADILRGKTDYFTFNRLSQVGEGALLSLPDSHAYRRF 390 Chlorobium phae...
WP_015751645 315 NDWVRGPGHFQRSLRFLSLLQELEIPSQVMLTLTDRNMDQVLPLARDLHGKVDRFTYNRLSAVGEGASLQLPRPEAYAAF 394 Desulfohalobium...
WP_015773006 319 NDSIRGHGHFQRVMNFLEILRAVHVQGQIMLTLTRDNMNQVLPLAELLEVKVWGLAFNRLSPVGRGAALALPSPAEFQDF 398 Desulfomicrobiu...

ZP_05313266  395 LESYAAAFERLSVLWLKDSLLNIVFERDGGRLFGGCAGHGCGAAFNFVSILSDGEVHACRKFPSPIGNILNDTLEAVYAA 474 Geobacter sp. M18
ZP_01290175  404 LREYLEETENNPVLGLKDNLINIVRDEQGLKPFGGCTGFGCGAGFNFATLLSDGEVHACRKFPSYMGNIYQEGLAGSYDS 483 delta proteobac...
ZP_07017337  404 LHEYIRATRDNPVLGLKDNLINSIRDENGHKPFGGCTGFGCGAGFNFATLLSDGELHACRKFPSPLGNIFQNGLIQSYES 483 Desulfonatronos...
WP_012174318 396 VREFIQAADRLSVLARKDNLINAVLYEQDRSVFGGCTGHGCGAAFNFISLLPDGSAHACRKFPSPIGNVFSDTIEAVYDS 475 Desulfococcus o...
WP_012505536 399 LATYLDLADSTPGIGIKDNLFNILRKERDEPYNGGCTGFGCGAAFNFFALLPDGSVHACRKFPSPVGVVPQSRLSELYDS 478 Prosthecochlori...
WP_011699306 409 LEAFADASEDNPTISFKDSLLNIVRRKRGLSLFGGCSGYGCGAAFNSIAVLADGETHACRNFPSRIGNVVRDGIASVYDS 488 Syntrophobacter...
WP_012474684 391 LKEYTAAAADNPVIGLKDNLINILRERKGVTPFGGCTGFGCGAAFNFVALLPDGEVHACRKFPSLIGNILENSFLTIYES 470 Chlorobium phae...
WP_015751645 395 MTEYLRAREEMPFLGIKDNVLNSVCWDENQTVTGGCTGFGCGAAFNFLSLLADGEVHACRKFPSRIGHIAADDLTTIYHS 474 Desulfohalobium...
WP_015773006 399 AARYCESASRLSVLSFKDNMLNAHLAATGQPLFGGCTGFGCGAAFNFMALLPDGEVHACRKFPSLIGNIAAASLGEIYDG 478 Desulfomicrobiu...

ZP_05313266  475 PAARRYRRGSSACAGCTLNGICRGCPAVTAGLGLDPFTEKDPFCS 519 Geobacter sp. M18
ZP_01290175  484 PAGERYRAGNSACLGCKLLPACGGCQAVIYSLGLDPAKDRDPYCF 528 delta proteobacterium MLMS-1
ZP_07017337  484 EAGRKYRAGSEACRDCRLLPACGGCQAVIYSLGLDPHKDRDPYCF 528 Desulfonatronospira thiodismutans ASO3-1
WP_012174318 476 STAEQYRAGAAACRGCPVRCVCGGCLAVAYGHGLDVFSEKDPFCP 520 Desulfococcus oleovorans
WP_012505536 479 MAAKRYRRGPESCQDCSLAPVCKGCMAVVHGMGLDVFHDRDPFCF 523 Prosthecochloris aestuarii
WP_011699306 489 REARRYREGSGACRSCALRPACGGCLAVSHSFGLDIFRERDPFCF 533 Syntrophobacter fumaroxidans
WP_012474684 471 LEAQRYRMGPDECKECRLRPVCGGCMAVVHGMGLDPFTEKDPFCF 515 Chlorobium phaeobacteroides
WP_015751645 475 ARAKQYRTGPAECLDCRVRPVCGGCLAVSAAAGVDITRDRDPFCL 519 Desulfohalobium retbaense
WP_015773006 479 QAAVSYRTRSEACRECAIVATCGGCPAVVSGLGLDIAKDRDPFCP 523 Desulfomicrobium baculatum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap