Conserved Protein Domain Family
rSAM_yydG

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TIGR04078: rSAM_yydG 
peptide modification radical SAM enzyme, YydG family
Members of this radical SAM protein family for peptide modification occur only in the context of members of family TIGR04077, which average about 50 amino acids in length. In Bacillus subtilis, this protein (YydG) appears to act on its cognate target peptide (YydF) prior to its export, and result in the creation of a signaling molecule that induces the LiaRS two-component system. [Regulatory functions, Protein interactions]
Statistics
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PSSM-Id: 188593
Aligned: 3 rows
Threshold Bit Score: 484.401
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05580666    6 ESVVVNLGARCNASCEHCCFSCSPTKKEALDKNEVINLVENFSNNPKIKTISFTGGEIFLNYPFLYSLLKIVNSSGKIST 85  Enterococcus fa...
ZP_00784766    2 KSLVINLSQKCNAKCDHCCFSCLPNSVNCLTDEEIEAVVRYAETHEDVELVSLTGGEALLRKSKVLETIHRLSILGKDVT 81  Streptococcus a...
WP_003242609   4 KTVSINLDSRCNASCDHCCFSSSPTSTTRMEKEYIRELVTEFAKNKTIQVISFTGGEVFLDYKFLKELMEIIKPYEKQIT 83  Bacillus subtilis
ZP_05580666   86 LISNGFWGREIETVKKYFLDMNRMGVTNLSISHDDFHSKFIKTDYIRNILIESRKYpDIQITVNIAVSKNSTGDKIIHDL 165 Enterococcus fa...
ZP_00784766   82 LITNGFWATNDKNTKSLLTSLRTAGLRYLTVSYDNYHSEYIPVDNIKRLFLHIKKF-DIEVALNMVVDKKNRGVDLLDKL 160 Streptococcus a...
WP_003242609  84 LISNGFWGLSKKKVQEYFHDMNSLNVIALTISYDEYHAPFVKSSSIKNILEHSRKYpDIDISLNMAVTKDKMSNHILEEL 163 Bacillus subtilis
ZP_05580666  166 GEAILGIPVTKFPLIPVGEAKN-INDDEFqnIYSLSHPNQLKCP--GFEPVYHFNGNVYPCCSPAIFDTALILNDELYQD 242 Enterococcus fa...
ZP_00784766  161 GESIFGVPITIVPASPVGRAKN-LNMEDL--YLKTIDELELTCPatGWEFVIHHDGYVYPCCSPSVFETNLRIGSIGDAD 237 Streptococcus a...
WP_003242609 164 GDSILGVKITKFPMISVGAAKTrIKQENIhkFYSLEDEDSLHCP--GYDIVYHHDGEIYPCCSPAIFETKITLREEYNQS 241 Bacillus subtilis
ZP_05580666  243 FDKTITKMNSNLLLYIMRREGFSWFINIVSnnnefshIKIN-KEFSSICSICRQLFKTENNIKLLTPYMRKYY 314 Enterococcus faecalis D6
ZP_00784766  238 ISELEDKFYSNMLLYILKREGFTWFIDKMK-------LDLTgKKFVSSCEVCKFIFSDMNKIKSITDDIKEYY 303 Streptococcus agalacti...
WP_003242609 242 FERTVEKLNSNLLLFILRKEGFKWFLNILKennkieeFDIP-YEFSSICGVCGSLFNSAEKINYFYPYMEKYY 313 Bacillus subtilis
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