Conserved Protein Domain Family
rSAM_ladder_B12

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TIGR04072: rSAM_ladder_B12 
lipid biosynthesis B12-binding/radical SAM protein
Members of this protein family occur in conserved genomic contexts highly suggestive of lipid biosynthesis, including an island shared between Kuenenia stuttgartiensis, which produces ladderanes, and Desulfotalea psychrophila, which produces a different kind of unusual polyunsaturated hydrocarbon.
Statistics
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PSSM-Id: 188587
Aligned: 8 rows
Threshold Bit Score: 242.246
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01312268    6 LISSNISTDPYPVYPLGMAIVAGALDGAGHEVRQFDFLVYDQDCRRLQGDLEAFNADVVCLSLRNIDNVDSFSSDKnwYL 85  Desulfuromonas ...
ZP_07017588    5 LLSTNTSLEPYPVYPQGMAMIASALSNAGHEVKQFDYLVSNESEELLGKEVLEFAPGVVGVSLRNIDNVDSFSDQSrwFL 84  Desulfonatronos...
ZP_05311665    6 LISTNTTTEPYPVYPLGLAVIAQALQAAGHRTEQFDYLASGASTELLASAVARFDPEYVCLSLRNLDNCDSLSSTG--YP 83  Geobacter sp. M18
ZP_06369018    6 VIASNTCQDPYPVYPLGASVVAGALRQAGYPTLVHD-LALEASPDALVRVLEAFDPDCIGISVRNVDNVDSLSAEAswTG 84  Desulfovibrio s...
WP_011734858   1 MISANVTLYPYPVYPLGMSMVAAALSGAGHEVQQLDYLQQERSLESVLEEVKRFQPGMIGISVRNIDNVNLLNTEY--YI 78  Pelobacter prop...
WP_015850413   6 LISSNTNVEPYPIYPIGMSVIAGALHDAGHEVIQYDMLAAGNSLDLLRAALAEAKPDYAGISIRNVDNVDSFTSHTnkFI 85  Desulfovibrio s...
WP_013163353   5 LVSVNQAVVPYPVYPLGVAYLCGALKQAGHAADHFDLLADG-GIAGLRQLLRRSRYDLIGLSIRNLDTVDSCDKND--FI 81  Desulfurivibrio...
WP_011189094  15 IISVNQVVVPYPVYPLGAACIIGALEGSGHQTRHFDMLADG-GLQALEPLLSSARYDFIGLSIRNIDTVDSASPDN--YL 91  Desulfotalea ps...
ZP_01312268   86 TDAKRLIETIRTISSAPVVVGGPAFSILPEEILSYLGADYGVVGEGEQAVPTLIDRISRGE-KVEAITCGSQPL 158 Desulfuromonas acetox...
ZP_07017588   85 EQTRRIIDSLREITRAPIVVGGPAFSIMPEAILEYLGADFGVEGEGEAAVVKLLERIQNNG-HGPRIVRSKEVL 157 Desulfonatronospira t...
ZP_05311665   84 AVAKGIVTLLRELTAAPVVVGGSAFSILPEELLSYTGADYGIVGEGEQLVCRLVEGLSQGM-SFPRVLRSERPL 156 Geobacter sp. M18
ZP_06369018   85 DALRDLVARLKTCGKAPIILGGPGFSLMPEALLEHSGADYGVTGPGEVALPALLDRLSIGK-ASPRIV-AAPGS 156 Desulfovibrio sp. FW1...
WP_011734858  79 HNVKNMVDAIRTVSDARIVLGGAGFSLIPEQILEETGADFGVIGEGEQLMVAFADGAERGIyPQKRLLGPASPL 152 Pelobacter propionicus
WP_015850413  86 QKAKNIVDVLKE-AKIPVIAGGAGFSLLPEEILDFTGADYGIVGEGERKMVELIAQLEQGK-KTRHIYGKEKGI 157 Desulfovibrio salexigens
WP_013163353  82 PEVASVVRLIRENSAAPVVLGGPAFSLMPRQLLEFLQADYGVVGEGEVLLPWLADELTAGRpPQAKLLRNEQPL 155 Desulfurivibrio alkal...
WP_011189094  92 NGAVAIAKLIRRLQKTFIVIGGPAVSIIPQLLLDLLEADYAVVGEGEEVMTWLAGEIGKKQpPSKKILKFSAIE 165 Desulfotalea psychrop...
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