Conserved Protein Domain Family
ocin_ACP_rel

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TIGR04069: ocin_ACP_rel 
peptide maturation system acyl carrier-related protein
Both PSI-BLAST and large numbers of noise-level HMM hits show a relationship between this family and the phosphopantetheine attachment site domain modeled by pfam00550. That domain includes acyl carrier proteins (ACP) and features an essentially invariant serine residue that is the attachment site for the phosphopantetheine prosthetic group. In this family, the corresponding residue is not Ser and is not conserved. Members are found in genomic contexts associated with a small Cys-rich peptide and a radical SAM protein we predict modifies the peptide. [Cellular processes, Toxin production and resistance]
Statistics
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PSSM-Id: 274959
Aligned: 11 rows
Threshold Bit Score: 71.5354
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_02619745   2 EQEKKLESIFEKYTNICFDDmDNRFKNIPLLDTELNIRPIILMLVLLDIESQYSIKLSRSKVINGEFSTFNSILKMI 78  Clostridium botulin...
ZP_05331185  11 DIYTVLVNIFEKRSKINFDE-NCYLKNENLFESKIMMPARELVLTLYDIEDYFSISIPEDVILSGRFNSFNNIYDIV 86  Clostridium diffici...
ZP_05493894   8 KIKERLLNIFNQRFNIDFTKwDKDYYTKNLLGEDIKLSARDLLYIYFDVKSQFNITIPQEEIANGKFITFGGIYDVV 84  Clostridium papyros...
ZP_02613953   3 EIKEILKEIFKNRFQIDFDKmNEIAMNKQLLGLEIGMSPNDLVYLLFDIEKEFKINVPKEEIAKGNFCTFNNIFKII 79  Clostridium botulin...
ZP_05494854   5 EVVKKLINMFNDMFN---KKiDNTMSDEHYFSNKLGISPRELVYYFLEVETQYGVRIPEKCIADGSFCTINKTADIL 78  Clostridium papyros...
ZP_04745998   5 NIRAKVKKVFFDLFQKDESKiQDSYCTDNFFGSKMGLLPGDVVAYLYAVEKEFNLQIPSSYIQEGKFNTLDNVTNII 81  Roseburia intestina...
WP_015926013  8 NIKEGLLNIFNQRFNIDFTKwDKDYYTKNLLGEDIQLSARDLLYIYFDVKSQFNITIPQEEIANGKFSTFGGIFEIV 84  Clostridium cellulo...
WP_015925791  4 EIFQRLQKIFFTRFNIDFKSkSTMDYEKHLLGEDWGLKPRDLLVLFIDIESQFGISISEKEIERGNFSSINNLVRII 80  Clostridium cellulo...
WP_013308383  9 GTGMKLENIFWKLFKIKAGEiN---KEATLLGPDMGLFPRDLVYLLFEVEKSFAILIPEEHIVGGGLLTYNSLYETI 82  Paenibacillus polymyxa
WP_003405994  6 SVQRKLNDIFNRIFDINLNSiNEELFERSLLGDFFCFEPIDLVCLYMEVEKIFNISIPQEYVVENRFNTindikeii 82  Clostridium botulinum
WP_009888009  5 EKELLLENIFFDVTGINFNKn-NNLKKELFFSPSLHIQPRELLLVFCEVIENFNIKIPEEKLLNRQFTSFDNVLKII 80  [Clostridium] diffi...
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