Conserved Protein Domain Family
nat_prod_clost

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TIGR04066: nat_prod_clost 
peptide maturation system protein, TIGR04066 family
Members of this protein family occur in various Clostridial genomes, always in the context of a short peptide and a radical SAM protein predicted to modify the short peptide. PSI-BLAST analysis suggests a sequence relationship to archaeal proteins designated as subunits of an H+-transporting two-sector ATPase. The modified peptide is likely to be a bacteriocin, and this protein is a candidate to act in either maturation or immunity.
Statistics
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PSSM-Id: 274957
Aligned: 14 rows
Threshold Bit Score: 304.232
Created: 10-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05494855         5 KRAILYPYDFKSFPLVKNSALITDYEIVRTVSPNGWGLTETDAGHI-AGLSTGHVVN--GDFSGSLENCDTVIf--TESY 79  Clostridiu...
ZP_04745997        10 RKAIIFPYNAECASLVRNRELLLNHEIVACVSPIGYGLQGKDAAYAyGGENTGIVIS--DKKISEINFDDLLV---CESS 84  Roseburia ...
kresibb:PPE_00316   3 NKLIIFPFDYETIALVRNLNLLGSYEDVVLISFQGSGMIGKDACVTdKGEVTGFIVKpeSCLEQEMERCDAILl--VKSN 80  Paenibacil...
ZP_05331186         2 KKVLIYPFTEEMAPFVKQENLLKDIDITSIVSLKGNGILGDKYKFNgKSLEVS------ENFDKELEKCTYILl--NNFY 73  Clostridiu...
ZP_05494389         2 YKLLVYPFSMEDNCITKYRDMLRGYELASLVCFEGAYENGRDAG-EfEEVDTGLIIT--DDFNTEIDKCDVVLl--LDKS 76  Clostridiu...
ZP_03291144         2 KTLAVYPYTPEQCYLKDFAEFVVGYEKIILVP-----LSGERKRLKrNSTSWEIV----DSWKTGCDLSETLLllsGLYS 72  Clostridiu...
WP_015926014        5 ERLLIYPYNVEFTPVLRHRSLLTEYDISCLVSPNGWGFTGKDAGIAdSGPDIGISVS--ADFEKSLDLCDTVMi--VESH 80  Clostridiu...
WP_015925793        3 NVGLVYPYNRQFTPFLRYGSL--DFKEFRLVAPGGWGMKDKDASRAdDGEYIGITVK--SCFESELEDCDCVVf--CDYS 76  Clostridiu...
WP_012200689        2 KKLLIYPFTKEMCPLARYRNQLKEYELIAAIPAHGFGWEGKDVCEIdGGTPTGFILG--GIFSDELKRCDAVLfnaCDKN 79  Clostridiu...
WP_012720972        1 MKIMIYPFDETFLPVLKSASEMSFEEEFVLVSPIGWGLVGKEYNYGnK----SYVVK--KDFENEASKCSAICi--VNSR 72  Clostridiu...
ZP_05494855        80 i---eLNYTKVLRPKVFEAAEKGKDILCFLSLEKNQVEEIEDYCEKKGVDFTYFPSHGQA-----FylgntepKVSAGYS 151 Clostridiu...
ZP_04745997        85 -----SDFDTFIMPQVKLAAECGKNVIFLYNISQQQKKEAEETCKKKNVKCVVLTNRRMD-----T-------DKLFEHE 147 Roseburia ...
kresibb:PPE_00316  81 f---kLDVAEVYLPVIKKAGQLGKKVMCNFTLPDSCMEFIEP-CEEQDDKLILK---NTF-----DvrtkdilPPDPGSV 148 Paenibacil...
ZP_05331186        74 s----dESENIILENIKKAVNHGKKIIFFSNSNSNIDNLKMIIPKEQQFEINSSKNM----------------VKDFQGR 133 Clostridiu...
ZP_05494389        77 f----nELKDAYIQRINTAVSKNKIVMTNNKIYDFCLKEFSGNKNIRILDNVLETGLNYF---------------TYDKR 137 Clostridiu...
ZP_03291144        73 l----eKYNEIIDYGINKQIEIIVEKAVWKILDDTRKELVKPLFVMEEIEKV-----------------------NSNQV 125 Clostridiu...
WP_015926014       81 l---pFDFDKYIFNKIKVAVRSKKNIICLLNLNKEAIKEIASLCNCEGVYFKYFDGNQNV-----L-------PADIIIE 145 Clostridiu...
WP_015925793       77 l---pLDFNKYIYPKILESIHKKKDIICLIPLEEHIELELKTLCNYEGVKFSYYKNESSQkfykkF-------IEESIIT 146 Clostridiu...
WP_012200689       80 mekeyAEYEKLAHMSVKEFVTAIPNVIPEPEITQS------------------------------------------DLK 117 Clostridiu...
WP_012720972       73 y---kLDIKANILSLINNGYDKKIIILRNLPIDEK-----RELCENSKECSIVFPNEGNA-----Nv------SENLDEF 133 Clostridiu...
ZP_05494855       152 IKEP---KVPVVLVFGNGERANKFDIQLTLRKFFLENGYKVGQIGSRHYCEMLGFHSFPRFMFDKQIDNVEKIQSFNRFV 228 Clostridiu...
ZP_04745997       148 IIPL---SVPVVFVASVIENTNKFDVQLGLRKFLQEEGYKVSQIGTKEYCELFGFHAIPEFMYANQLSEADKIVWFNRIC 224 Roseburia ...
kresibb:PPE_00316 149 IHDF---FTPVLFVLGLNERTHKLNLQLNLRQKLEAQGYRVSQITSNGCGELIGAHSFPQFMFESGMTETQKIIMFNRYL 225 Paenibacil...
ZP_05331186       134 IYNI---DTPVIFVCSIFEGLEKFDIQLALRNKLLIDGYKVLQIGTRQVCELFDFYSFPEFMYSNNIEEQDKVLMLNNTL 210 Clostridiu...
ZP_05494389       138 MTQP---DIPVITVMSIGESCNKFEAQLDLRKKFQDKGYKILQFGTKDYCDLFGFKKLPSFLMSKNISFDEKVYMFNYYI 214 Clostridiu...
ZP_03291144       126 LHDI---ETPVISIMGMGPNTSKFYAQLALKQYFEQEGYRTLVLGSSEMSSLFDIERLPSSMI-KNISFTQKIYILNQYI 201 Clostridiu...
WP_015926014      146 NESIeeiDTPVILTLGITEKTNKFEIQLALREKIQKAGYKISQIGTRPYCEMMGFHPFPSFMYGNAISDVNKVLMFNRFI 225 Clostridiu...
WP_015925793      147 IQTI---DIPVIFILGTGEKTNKFDIQLALRKYYLEKGYKVSQIGTRQYCECAGFNSFPDFMFDKTMSETQKVVCFNNYV 223 Clostridiu...
WP_012200689      118 LKEI---PIPVVMVMGLGENCQKFDIQLSLRDTFIKSGYKVSQFGTKSYSMLFGFDSLPDM---PETSLWKKTYLYNNLF 191 Clostridiu...
WP_012720972      134 LFDF---SIPIIFVAGITEETDKFKVQLELYSELCRQGYNVGILTSRADSLLSNIPTLPDFLYNEQIPTKKKIILLNQFI 210 Clostridiu...
ZP_05494855       229 IELEKREDPDIIVIGVPGGIMPYTDKYHNHFGLVNYMVSQAVSPDFSIFSTLF-ED--YFPEYFKQIKLSIKYKFGYDVN 305 Clostridiu...
ZP_04745997       225 KSIELQEKPDIFIIGVPGATMVFNETITNNFGITAFEIANAVRPDTAIMCVPY-EG--YDSGFLKMIQTSSKYKLDMQVD 301 Roseburia ...
kresibb:PPE_00316 226 KKIEQSEKPDLILVGIPGGIVPFNNTFTNYFGVTSFLVSRAVRPDGLICCLHY-DE--YNIKYLEHVKQYMENRFSSSLL 302 Paenibacil...
ZP_05331186       211 KKLELEKKPDLIIIGIPGGILPFSSKAFGDFGITMYKVLQAVTPDCTILSIPH-GK--YSDEEISYFGKITKSKFNIEVD 287 Clostridiu...
ZP_05494389       215 NREVLKDDYDIVIIGVAGGILPVNRYITNYFGEISLIVSSALNIDINILCSYHnED--INVESLYECRNFCKGRLGCFTD 292 Clostridiu...
ZP_03291144       202 WEKSKEYKPDIIIIGCPGGIMPYDRHISNGFGELPLIVSKAVPIDINLVFTYYvNQqiLNTDYISSLKKFCTENFGTNNV 281 Clostridiu...
WP_015926014      226 KKIEETEEPDIIIIGIPGGIMPFNREFTNKFGLVAFEISQAITPDVVIASLLY-ED--YKPEGFDTYMNLVKYKLGFEVD 302 Clostridiu...
WP_015925793      224 KSIEKDEKPDLFIIGIPGGIIPLNDLFVQDFGILAYMVSCAVRPDVCILSVYY-DE--YDNSLFEDVNTSIKHKFGYDVD 300 Clostridiu...
WP_012200689      192 WEAYKREKPDILIVGVPGGIMPITSYAYERFGETALALSYAARPDIAFLSYYH-VV--PTEEYFEMLRQYARYRLGAMNI 268 Clostridiu...
WP_012720972      211 KKYELSIKPDILIIGIPGEVLMLSNRYIGNGGSIAYIISQATRADGVILCSMY-ND--APSSELVNIGEKVSERLGSKVK 287 Clostridiu...
ZP_05494855       306 AFNLSNTKISWDATAAKDTIQYITLAKPAIDNNAEKYKRE-GLP-VFNSINVHDSLKLYEYLLDELGQ 371 Clostridium papyrosolv...
ZP_04745997       302 CFNMANKHFDVARSKEEKKLSFITTGADLVDKRIEDLKRDtEIP-IYNSLNVTSALEMYSYIVNKLSE 368 Roseburia intestinalis...
kresibb:PPE_00316 303 GYAICNNVFDSYSSSTVNMQ-YASVDHRFVEEKKQEFSNY-SVP-VLHLSNDEDMNRLTKDILHYFSV 367 Paenibacillus polymyxa...
ZP_05331186       288 YYNIAAKSILSHPTETMGKPFYLTLGKSLVEKKIATLQNK---N-VFCLSNKSEIDRLIELMIKEFIK 351 Clostridium difficile ...
ZP_05494389       293 YYYMSDRQFRISHDHDIE---YFMLERQHCINNLPAIDNE-TLK-FCHVLDTDVKDNLLNALVEELEG 355 Clostridium papyrosolv...
ZP_03291144       282 FLGMTD--IDMYYDDEHKTAEYMLLDEKKVQESIGLTYGD---Q-IFNISKPETFKEIGTIIENILKV 343 Clostridium nexile DSM...
WP_015926014      303 FFNIANMQFDWKRANQEHVKSYTSLDYKFIDEKKTKYTKS-KIP-VFNILNKDDSDTIAKQTIEKLTG 368 Clostridium cellulolyt...
WP_015925793      301 CLNVANVKLNMPESYLHRGLKYFNVSSKDIEELKAVLNSQ-NQI-LFNISNSKDAQSIGEFSESILEK 366 Clostridium cellulolyt...
WP_012200689      269 NFHASNTKLIVD--NDIHALSYLTLKSQFVLDEAARHVPD-MLPhIFNSLTPESSEPAYLKIIEILQQ 333 Clostridium phytoferme...
WP_012720972      288 YYTITNKMLDFEETQSIQRVQYVTLPHEFVLMNTKEYNND---N-IYFTFQHEDIKRMTYCIIEDLSE 351 Clostridium botulinum
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