Conserved Protein Domain Family
rSAM_nif11

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TIGR04064: rSAM_nif11 
nif11-like peptide radical SAM maturase
Members of this family are radical SAM enzymes that occur co-clustered with nif11-related ribosomal natural product (RNP) precursors described by TIGRFAMs model TIGR03798. Homology within the bacteriocin family reflects largely constraints on the leader peptide, tied to processes such as cleavage and export, and members associate with various families of maturation enzyme. The gene symbol assigned is nlpM, for Nif11-class Leader Peptide family Radical SAM Maturase. [Cellular processes, Toxin production and resistance]
Statistics
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PSSM-Id: 274955
Aligned: 4 rows
Threshold Bit Score: 754.33
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_012033515  16 LAPYHRFTVEGRSYVVNTDRFRCARLDDRTAAFLAAWEGDPRVQPPDDVRGALVKTGLLAGERGKILPDgdarlerdrra 95  Pelotomaculum t...
WP_012474127   3 FKAHHKFVHRGKRYVLNIEDMAASMIGDDTWRVLQAAPSFAFPRLSQEAGRDLRRLDLIASENKEAVES----------- 71  Chlorobium phae...
WP_005814916   6 VSPFHLFEYRGHPYLLNIEKMAAHSVSTELLPILHNIRE-PQTKLPADQEKILRSWDLISECQDNDAPV----------- 73  Desulfitobacter...
WP_012509568  15 IATFHFFSYRGSYYRISANEMSSEKIS--RAEFLEAIVN----RFPQESDASIH--EQLTDSGSRHAPE----------- 75  Prosthecochlori...
WP_012033515  96 aagwLAGAAARTSTLCLMVAQECNMACVYCYGNAGSYGGGGLMTAETARRGVDWLVRHSGGNRKLGLSFFGGEPLLNLPV 175 Pelotomaculum t...
WP_012474127  72 ----ANTTSTPIRNIALFITQNCNLACTYCYGKEGGYGSSGHMNSATARKAIDWLIKQSGDIKTLGVAFFGGEPLLNFSL 147 Chlorobium phae...
WP_005814916  74 ----VQMEPVPITYLYLFLTQSCNLRCIYCYGDGGEYGAGGSMDSATAKQAVDWLITWSGNMKKIHLGFFGGEPFINFPL 149 Desulfitobacter...
WP_012509568  76 ----PLEKEHPVAGMDLFVAQTCNLSCVYCYGQDGTYGDRGLMSEKTALQAIDWLIEASGPVKSLRINFFGGEPLLNFPL 151 Prosthecochlori...
WP_012033515 176 IRRTVEYAKQAGERSGKTFAFSVTTNASLADKAAIDFLRANQFQIIISFDGTAADQDRNRPFKDGSPSYAAVAPRIKQLL 255 Pelotomaculum t...
WP_012474127 148 MKKVVEYARQRGAESNKDFEFSITTNGSLLTDEKIAFLNENKINPIVSFDGSKDVQDAQRPFKGGQGSYDVIEPKIRKLL 227 Chlorobium phae...
WP_005814916 150 MKATVDYAQSKAQEAHKEVAFYVTTNATLLDDEKIAFIKEHQFSVQISFDGPREIQDAQRPYANGQGSYDSVVPKIKKLL 229 Desulfitobacter...
WP_012509568 152 IKTVVPYALARAEKAEKKALFQITTNGTLLDDEIIRFFQQHEFKVLVSIDGPQDIHDRQRRFADGNGSFKAVTQHLDNLV 231 Prosthecochlori...
WP_012033515 256 SAFPRACGRATLYGETDPGGVLAALKEMGFQNCHLVPASGRLLTGAPPEKALFRRERERAAGLRREAEAFVAAVKRRDpA 335 Pelotomaculum t...
WP_012474127 228 ETFPNATARGTLKGATKPKEVTVALNNIGFRSTHMTIASPSLFDAPDKRMEEECGSRSMTTDLDLGAEDLLVSIKSRD-A 306 Chlorobium phae...
WP_005814916 230 ACVPEASGHGVLWGDTNPQLVKATLQDLGFTSLTLAPASSSLFTDESEKKPSSRKTQAQLQALEQETAAWLHHLRSRD-K 308 Desulfitobacter...
WP_012509568 232 KNVPETDAHAVILGDTDPDIVINALRKFGFRGISVLPASGSVFITE-EDPGKNRDTASILKHMEDEAELWLNLTKKRA-I 309 Prosthecochlori...
WP_012033515 336 EAARQLKDrDL---SLVTSFGRAPFMTRRLFFCGAGRNYLAVDVDGGLYPCHRFVGLREYLLGGVdGAEDPPRGLFHESP 412 Pelotomaculum t...
WP_012474127 307 DRLSWLKE-NG---DLVSRLTAFVNKEKKYFGCGAGRAYVGVDNTGGVFLCARFVGTKEYKLGNV-FEGQPSREKYMNSP 381 Chlorobium phae...
WP_005814916 309 DILHGLRA-SSggyGIYPGMIALLHNRRKYHFCGVGRKMAGVSVTGDIYPCHRFVGNDDYKLGHV-GDENFNRDDYLQSP 386 Desulfitobacter...
WP_012509568 310 KQLQQLQT-YS---QFTAAVKSLLQHRKNYHPCGAAIGLVAVSCSGDIYPCHRFVGQEKHRIGDL-SGHELNRNEYLKSP 384 Prosthecochlori...
WP_012033515 413 VTESEECRRCWLKYVCGGGCAYANIASTGSPFRPDPAYCRQFGQTAETLLDAAGRLTGEDWEFLYQNNVVIRPPCPLDF 491 Pelotomaculum th...
WP_012474127 382 IRTVEECKNCFARYICGGGCYHENVGASGAADKPSVSYCRIMRRSVEMVAYAACQLTDGDRKYLSQSGIVRSRSCPFDF 460 Chlorobium phaeo...
WP_005814916 387 PALRANCASCFARYYCAGGCRHDNLSSSGSSHVPSEEICRLRRRELELAAVIVSNLSSDDQAFLVNERIIAPKPCPLDF 465 Desulfitobacteri...
WP_012509568 385 VMTNEHCMKCYARYYCAGGCKQDNIISGGSLYQPSEDMCRLRRRQFELAAYIVSELDKDGKLFLEQEGIIPPKPCPLDF 463 Prosthecochloris...
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