3KCU


Conserved Protein Domain Family
formate_focA

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TIGR04060: formate_focA 
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formate transporter FocA
FocA (formate channel A) forms a pentameric formate-selective channel through the plasma membrane. The focA gene is largely restricted to Proteobacteria and occurs adjacent to genes for pyruvate formate lyase (PFL) and the PFL activase, a radical SAM protein. FocA is homologous to a nitrite transport protein, NirC. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Statistics
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PSSM-Id: 274951
Aligned: 16 rows
Threshold Bit Score: 250.743
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3KCU_A        14 AMAKVAEEAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTGTMPFGMAKLVGGICFSLGLILCVVCGADLFTST 93  Escherichia col...
WP_012142057  26 SLYQQAETYGQSKVVKAVWQSFGLAAFAGAFIALAFVFYITVTTGSSTSPWGMVRLVGGLAFSLGLMLVVICGGELFTST 105 Shewanella sedi...
WP_012006133  14 ATAKIAEDAGVYKATKHPLKTFYLAITAGVFISIAFVFYITATTGTAGVPFGLAKLVGGICFSLGLMLVVVSGADLFTST 93  Serratia
WP_012263076   6 EMAKIAEDGAVYKATKHQLYSFISAILAGGFIGLAFVFYTTTQTGSADMPWGMAKLVGGTVFSLGVILCVVFGAELFTSS 85  Actinobacillus ...
WP_011145906  14 IMTQIANDIGVYKTTKPVAITYLSAITAGIFISIAFVFYITATTGTTSVPYGLAKLVGGICFSLGLMLVVVCGADLFTST 93  Photorhabdus lu...
WP_005310913  14 AIAALAEDITYAKATKPAHKVIPLAITAGAFIAIAFVFFITVTTGAGDVAWGLSKLVGGLCFSLGLILCVLLGAELFTST 93  Aeromonas salmo...
WP_011866185  23 SLCQRVATYGQEKVTKQAMQSIGQAMFAGAFIALAFVFYLTVTTGASG-DWGMVRLVGGLAFSLGLMLVVICGGELFTSS 101 Shewanella loihica
WP_006032335  14 ELLKKAESIGVAKATKAPKQAFMLAITAGVFISIAFAFYTTVTTGTADVAYGLKKFMGGFAFSLGLLLVVVCGGELFTSS 93  Moritella sp. PE36
WP_011771545  14 QLTEKAADVAYNKATKAPLSAFYLAITAGLFIGLAFVFYVTVTTGTENVAWGLSKFAGGAAFSLGLLLIVVVGGELFTSS 93  Psychromonas in...
ERE20725       8 AYVVDEAASKQEVLLSEPGRYLLSAAMAGALIAVVLAVSLKLGQVFFAAGDSGYYIATSGFFGVALVSIIVCKVELFTSN 87  Pseudogulbenkia...
3KCU_A        94 -VLIVVAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQWGLNVLQTADHKVHHTFIEAVCLGILAN 172 Escherichia col...
WP_012142057 106 -VLSSVAWAQKQVSTRELLKCWLRVYLGNLLGALLMLTLIMAARMYELDGGRWGLNALNIAQHKLHHGWFQAFVLGVLCN 184 Shewanella sedi...
WP_012006133  94 -VLIVIAKASGRISWCQLGANWLNVYIGNLIGALFFVALIWFSGEHMVANGQWGLNVLQTADHKLHHTFVEAVCLGILAN 172 Serratia
WP_012263076  86 -TLTAVAKATHRITWLQMFKNWFIVYGGNFIGGLSVVVLIWLSGQIMAANGQWGLTILKTAQHKIHHTWMEAFTLGILCN 164 Actinobacillus ...
WP_011145906  94 -VLTIISKATGRITWYQMMINWINVYFGNLIGALFFVAIIWFAGQYHVADGLWGLNVLQTANHKIHHSFIEALFLGILAN 172 Photorhabdus lu...
WP_005310913  94 -TLTLVAKAANRITWGQLLKNWGLVYFGNLIGGLIIVALIIMSAEYTAANGQWGLNALKVAQHKIHHTFFEALALGILCN 172 Aeromonas salmo...
WP_011866185 102 -VLSSVAWAQKRVSTRELLACWGRVYLGNFCGAMIMLALILSAKMYLLDGGLWGLNALKVAQHKLHHSWGQAFALGILCN 180 Shewanella loihica
WP_006032335  94 -ILTIIARANNKITTLQLAKNWAVVYAGNFIGCLFFVMLMVLAKQHLVADGAWGINAMKIAQHKLHHTFIQAVTLGILAN 172 Moritella sp. PE36
WP_011771545  94 -TLTLIAKASKRITTAQLLKNWIIVYFGNFIGATFLVFLIFFAGMYNTDHGQWGLTVLHIAQHKLHHSSIEAVSLGILCN 172 Psychromonas in...
ERE20725      88 vMYFTVGRLSGRCRTCNLLRSWAVVYIGNLIGVLLFVAVLAGAGGMGALPA--GHLLFNVVEHKVHASSLEIFWKGVLCN 165 Pseudogulbenkia...
3KCU_A       173 LMVCLAVWMSYSGRSLMDKAFIMVLPVAMFVASGFEHSIANMFMIPMGIVIRDFASPEFWTAVGSAPENFSHLTVMNFIT 252 Escherichia col...
WP_012142057 185 MLVCLGVWMTFASRDALTKAILLMLPVAMFVSSGFEHSIANLFMVPLGISIQHLASPEFFTSLGVTAAQYSDLTLEHFIF 264 Shewanella sedi...
WP_012006133 173 LMVCLAVWMSYSGRSLMDKMFAMILPVGMFVASGFEHSIANMFMIPMGIVVKNFATPEFWQAVGATPEQFAHLTVSNFII 252 Serratia
WP_012263076 165 MMVCLAVWMANAGKSLTDKAFIMIMPIALFVSSGFEHCVANMFMIPMGMMIAHFASLEFWTAINIDPAQFADLDLYHFIV 244 Actinobacillus ...
WP_011145906 173 LMVCLAVWMSYAGRSLMDKIFVMILPVSMFVASGFEHSIANMFLIPLSIAIKHFAPTEFWINVGATPEQFSQLTISHFIT 252 Photorhabdus lu...
WP_005310913 173 LMVCLAVWMAFGARSATDKVMVMLLPVAMFVASGFEHSIANMFMIPVGIAIHSVAGPEFWQAIGQDPATFADLTVSNFVL 252 Aeromonas salmo...
WP_011866185 181 MLVCLGVWMTFASKEALTKAILLMLPVAMFVSSGFEHSIANLFMVPLGIAIKQLAIWDWYQIPGFTAEQFSDLTLLHFLT 260 Shewanella loihica
WP_006032335 173 LLVCLGIWMSFAARSITDKFVAIALPVTMFVASGYEHSIANMFMIPLGYVIANFSGPEFWLLTGANPADFTDLTLSNFVF 252 Moritella sp. PE36
WP_011771545 173 MMVCLAVWMAFAARTITDKMFAVFLPVTMFVASGFEHSIANMFMVPSGILIQQFAPAEFWLAIGEHTSQYSDLTIYNFIF 252 Psychromonas in...
ERE20725     166 WVICLAVWVPMRLANEAARLLIIMLLVFVFFFSGFEHSIANMAFFALAKLQG-----------------MAGLEWGD-IL 227 Pseudogulbenkia...
3KCU_A       253 DNLIPVTIGNIIGGGLLVGLTYWVIYL 279 Escherichia coli K-12
WP_012142057 265 NNLIPVTLGNIVGGGAFVGLGYWLIEH 291 Shewanella sediminis
WP_012006133 253 DNLIPVTIGNIIGGGLLVGLTYWVIYL 279 Serratia
WP_012263076 245 KNLIPVTFGNIVGGVFFIGLVQWFLYI 271 Actinobacillus pleuropneumoniae
WP_011145906 253 NNLIPVTIGNIIGGAILVGLTYWSIYL 279 Photorhabdus luminescens
WP_005310913 253 HNLIPVTIGNIIGGGVMVGLTYWFIFR 279 Aeromonas salmonicida
WP_011866185 261 NNLIPVTAGNIVGGGLVVGLGYWWIDs 287 Shewanella loihica
WP_006032335 253 NNLIPVTIGNIIGGGVLVGLTYWAIYC 279 Moritella sp. PE36
WP_011771545 253 DNLIPVTIGNIIGGGVIVGLMHWMIYL 279 Psychromonas ingrahamii
ERE20725     228 HNMVPATLGNIVGGAIGVGLVVFRLER 254 Pseudogulbenkiania ferrooxidans EGD-HP2
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