Conserved Protein Domain Family
rSAM_MSMEG_0568

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TIGR04043: rSAM_MSMEG_0568 
radical SAM protein, MSMEG_0568 family
Members of this protein family are radical SAM proteins related to MSMEG_0568 from Mycobacterium smegmatis. Members occur within 8-gene operons in species as diverse as M. smegmatis, Rhizobium leguminosarum, Synechococcus elongatus, and Sorangium cellulosum. The function of the operon is unknown, but similarity of MSMEG_0568 to some cofactor biosynthesis radical SAM proteins suggests a similar biosynthetic function. [Unknown function, Enzymes of unknown specificity]
Statistics
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PSSM-Id: 274940
Aligned: 14 rows
Threshold Bit Score: 526.166
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EED75970       2 TELQSFGLRLVd-PSAGVASRRGGAGPSDHKAVTVDGHTIMVPVHTSSAWHSPFTAE--APDARGVSRVMRGSIPIAS-I 77  Variovorax para...
EAQ75649      14 TELQVNGVAVP--AVGGNPGRRGGAGPSDHRAISVDGTTVMVPVYNTASQDSPYALE--RHDDGMVWLRHRDQSGSRQlV 89  Synechococcus s...
WP_010873943   8 TELQSKGLRLVd-PNAKDLGRKGGAGPSDHRAVTVDGTTVMVPIYTSTAAASPYSIN--LASMPPKTVLSKGDEEIAA-I 83  Synechocystis s...
WP_012162718   8 TELQSNGLQVIa-PSIGVAGRRGGAGPSDHKAVTVDGTTVMVPIYTGTASQSPYTAQ---VNQGRQAVLEKADQAVAT-V 82  Acaryochloris m...
WP_012554462  16 TDLQSFGLQVDg-QVGGI-ARKGGAGPSDHRTVTIAGQTVMVPVYTAGARRSPFQAG--PPGADGSHVLVRDGRPVGT-I 90  Gluconacetobact...
WP_011863253   9 TDLQVNGISST--PKKGNRGRKGGAGPSDHRALTIEGKTVMVPVYNHLSKKSNYQLS---EESDGQFILQNSEDSKIKeL 83  Prochlorococcus...
WP_012591005   8 NELQSLGVRLId-PDAGASGRRGGAGPSDHKALTIDGLTIMAPVHTAPASGSPYLVE--KPDASGRSRILRDGLPLGV-V 83  Methylocella si...
WP_011145555  14 tdlqCNGLKWEg--NFGL-SRKGGAGPSDHKALSLDGQTMMIPVLNLAVQDSPYTAK--PEPHSDKVIVFKNRIPVAT-L 87  Photorhabdus lu...
WP_011981316  22 VDVAIRGVRLAa-PV----RRTGGAGPSDDGHVVLGGLATALPLRS----DSPYLVRegRLVREDPLGALLEVTDLGIeV 92  Kineococcus rad...
WP_011595978   8 VDVAVRGIRSLnvPV----TRTSGAGPSDDGHVLIGGIGGAIPIRS----DSPYEVS--------GNRLLMNGTDMGVeI 71  Rhodococcus jostii
EED75970      78 SFPKQPRFYAMQTFDGVPYSHIATLHGSDVLATTVLQSCIRYESRKKSCKFCAIGQSLAAGRTIARKTPEQLAEVARAAV 157 Variovorax para...
EAQ75649      90 DTPPEPRFYGLSTSDGTPYRSIALLHGRDVLATTLLQTCIRFRDRAESCQFCAIEQSLDDGRTLARKTPEQVAEVAEAAV 169 Synechococcus s...
WP_010873943  84 ALPRQPKFYDLKTADGIPYSHIALLHSNNVLATTVQQTCIRYRDESTVCQFCAIEKSLDAGRTITRKLPEQLAEVTEAAV 163 Synechocystis s...
WP_012162718  83 EFPRQPQFYQLQTAEGIPYWKIALLHSHDVLATTVLQTCMRYRDPDTACQFCAIEKSLEADRTIARKTPEQLAEVAEAAV 162 Acaryochloris m...
WP_012554462  91 RFPAPPRFYGLTTADGVPYWKIALLHGRDTLATTVHQTCIRYADRRTSCQFCAIGQSLEAGRTIAYKTPQQLAEVAKAAV 170 Gluconacetobact...
WP_011863253  84 STTKEPNFYSLKTKDGIPYKSIALLHSKDVLATTILQKCIRFRNREESCQFCAIEQSLKNEQTIVRKTPDQIAEVAEAAV 163 Prochlorococcus...
WP_012591005  84 SFPAQPKFYGLTTADGVPYSKIATLHGRDVLATTVLQSCVRYKSRAKTCQFCAIGESLAAGRTIERKTPAQLAEVAKAAV 163 Methylocella si...
WP_011145555  88 TAPARPRFYDLKTAEGIAYQQIATLHSRDVLATTVLQHCIRMKDKATACQFCSIDQSLKEGRTLIRKRPEQLAEVAKAAV 167 Photorhabdus lu...
WP_011981316  93 EPVQRPRFYDLATTDGIPYEKIAKLHGRDVLATTVVQTCSRYAPEDR-CRFCAIESSLESGSTIAVKTPAMLAEVAEAAV 171 Kineococcus rad...
WP_011595978  72 EPVRRPRFYDLDTADGISYEKIARLHGTNVLATTVVQTCIRYDPQQR-CRFCSIEASLQSGSTIAVKKPEQLAEVAEAAV 150 Rhodococcus jostii
EED75970     158 LLDGVKHMVMTTGTPNATDRGAAILCESAFAIKA-AV-DLPIQGQCEPPDDDQWFHRMKAAGIDTLGMHLEVVTPEVRER 235 Variovorax para...
EAQ75649     170 RLDGVKQLVMTTGTPNTDDRGARLMAETARAVKA-RV-PLPIQAQCEPPDDPIWFRRMQEAGVDSLGMHLEVVEPEVRRR 247 Synechococcus s...
WP_010873943 164 RLDGIEQVIMTTGTPNSGDRGAAYLTKCAAAIKA-RV-NIPIQAQCEPPDDFIWFERMKAAGVDSLGMHLEAVDPDVRAK 241 Synechocystis s...
WP_012162718 163 RLDGVQHMIMTTGTPNTRDRGAAYLAECAQAIKA-RV-NLPIQAQCEPPDGFGWFAQMKAAGIDSLGMHLEAVDPQVRSQ 240 Acaryochloris m...
WP_012554462 171 DLDQVRDMVLTTGTPNIVDRGAAVLAESARAIKA-AV-DLPLQVQCEPPRDHDWFQRLRDAGADTLGMHLEAATQRVRER 248 Gluconacetobact...
WP_011863253 164 RLDGIKQLVMTTGTPNTSDRGARIMAEAAKAVKA-KV-DIPIQGQCEPPDDPIWFQKMKDSGVDSLGMHLEVVEEEIRKK 241 Prochlorococcus...
WP_012591005 164 ELDGVRHMVMTTGTPPGKDRGAAILAESAAAVKA-AV-DLPIQVQCEPPDDDAWFGRLREAGADALGMHLEAVTDEVRAR 241 Methylocella si...
WP_011145555 168 ELDGVKQMVITTGTPNTGDRGAKILYDSVKAIKA-QV-DLPIQVQCEPPDDFAWFQRLKDAGAVSIGMHLEAVSERVRQK 245 Photorhabdus lu...
WP_011981316 172 RLDGVKHVVMTTGTSTAPDRGARHLARCVRAVTE-AVpGLPVQVQCEPPGDLATLTELKDAGASSIGIHVESLDEAVRRR 250 Kineococcus rad...
WP_011595978 151 RLDGVTQMIMTTGTSAAKDRGARHLARCVAAVKAvAP-DLAIQVQCEPPGDLGTITDLRNAGADSIGIHVESLDEEVRRR 229 Rhodococcus jostii
EED75970     236 IMPGKASVPVSRYMSAFEAAVRVFGRGQVSTYILAGLGDTREAILDTCDQLLARGVYPFVVPFVPISGT---PLEDHPAP 312 Variovorax para...
EAQ75649     248 ILPGKAELSLERYFTAFEQAVAVFGRGEVSTYLLAGLGDSAESIVSCSERLIALGVYPFVVPFVPIAGT---PLEHHPAP 324 Synechococcus s...
WP_010873943 242 IMPGKAEVPVSYYYEAYEAAVKVFGWGQVSTYLLAGLGDSFETLVEASEKLVNMGVYPFVVPFVPISET---PLANHPAP 318 Synechocystis s...
WP_012162718 241 IMPGKAEVPLSHYFEAFDAAVQVFGWGQVSTYLLAGLGDSLDTLVEASQRLIDLGVYPFVVPFVPISST---PLANHPAP 317 Acaryochloris m...
WP_012554462 249 IMPGKATVSVDRYMDAFASAVPVFGRGQVNTYILAGLGDTAEEILALAGRLIALGVYPFVVPFVPISGT---PLEDHAPP 325 Gluconacetobact...
WP_011863253 242 ILPGKSEIPLERYYKSFEESVAVFGRGEVSTYLLAGLGDSKESLINCSKKLISIGVYPFIVPFVPIAGT---PLEHHPSP 318 Prochlorococcus...
WP_012591005 242 IMPGKAQVPVERYFSAFRAAVPVFGRGQVSTYILAGLGDARDDILDICRRLIDIGVYPFVVPFTPISGT---PLENHPTP 318 Methylocella si...
WP_011145555 246 MMPGKAEVSLEKYFAAFEAAVAVFGRGQVSTYILAGLGDTELEIVEMSAKLTEMGVYPFVVPFVPIRGT---PLEHHPKP 322 Photorhabdus lu...
WP_011981316 251 WMPGKSTVPMAEYRAAWTEAVRVFGRNQVSTYLLVGLGEDPDELVAGAEDLVELGVYPFVVPFRPLAGTlavDVDGAGAP 330 Kineococcus rad...
WP_011595978 230 WMPGKATVPLDEYRAAWREAVRVFGRNQVSTYLLVGLGEDPDELVAGAAELIDMGVYPFVVPFRPLAGTl-aVEDGAQAP 308 Rhodococcus jostii
EED75970     313 SPEFMKSLLAPLGERVVAAGLRSADIKAGCGKCGACSSLSIYE 355 Variovorax paradoxus S110
EAQ75649     325 STDFMVEVYTAVGGLLEVSDLSSAAMTAGCAKCGACSALSLFE 367 Synechococcus sp. WH 5701
WP_010873943 319 DSDFMFALYQRVGTIIKQSQISSVDMKAGCAKCGACSALSTFA 361 Synechocystis sp. PCC 6803
WP_012162718 318 SSEFMFTLYQQVGAMLKQAGMSSADINAGCAKCGACSALSTFE 360 Acaryochloris marina
WP_012554462 326 SAEFMASLFTPLGKMLRTAGMTSSDIRAGCGRCGACSSLSAYE 368 Gluconacetobacter diazotrophicus
WP_011863253 319 STDFMIDIYQSVSHLLNEGNIKSDEMSAGCAKCGACSALSLFE 361 Prochlorococcus marinus
WP_012591005 319 SPAFMDDLLAPLALMLSEGGLASSDVKAGCAKCGACSALSAFE 361 Methylocella silvestris
WP_011145555 323 DQAFMQSLYPKIGQQLKQHGLNSENTQAGCAKCGACSSLKAYE 365 Photorhabdus luminescens
WP_011981316 331 GAAVLEDVSRRVAKALRAGGMRGADQMAGCAACGACSVLQNLN 373 Kineococcus radiotolerans
WP_011595978 309 SPALLADVTSRVAKELQAGGMRGADQKAGCAACGACSVLQNAG 351 Rhodococcus jostii
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