Conserved Protein Domain Family
export_SdpB

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TIGR04033: export_SdpB 
antimicrobial peptide system protein, SdpB family
Members of this protein family resemble SdpB (Sporulation Delaying Protein B), an integral membrane protein associated with production of the cannibalism peptide SdpC in Bacillus subtilis. Similar proteins are found in Myxococcus xanthus.
Statistics
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PSSM-Id: 274931
Aligned: 3 rows
Threshold Bit Score: 377.28
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEJ38570      27 LIYSVDLKSRAIWGGSLLLAVAQLSILLFTSSAHLFaqvGKAAPGPVCNGFTHFSIFCVIP-----FDHVIWAKALeiaI 101 Corynebacterium...
WP_003228363  10 YIDTYNPWKNTYALFRSLLGFSTLLVLLFNSTDILF---SYSANNVTCENVYIPTAFCFAKeysinFEIIRYLMIF---I 83  Bacillus subtilis
WP_011556541  12 WVAGPSPWSNVYGLARTLVALGTGGTLAFSDTTTLFrpvAGIPEAPVCEGIRAASFFCVLPsg--wLEVARWAAVL---L 86  Myxococcus xanthus
EEJ38570     102 FLAVVSGWRIRIVAWLHLYATYSLSLTTSLPDGGESVGLLLAFLLAIASISNDKKWAWKPSSERKQVYaVHDGVAAAAII 181 Corynebacterium...
WP_003228363  84 LTLVVIGWRPRFTGLFHWYICYSIQTSALTIDGGEQIATVLSFLILPVTLLDSRRNHWNIKKNNNESF-TKKTVLFYIMT 162 Bacillus subtilis
WP_011556541  87 LLVVASGWRPRVTGLVHWWVAVSMPWSASLTDGGDQIAAILALLMLPLALTDDRRWHWDTPRESTGNDeAKRLIARSAWV 166 Myxococcus xanthus
EEJ38570     182 MLRVQLAYIYLDATVAKFGIADWANGTASYYVVNSPMFGDAGPLASLSSALVGNPLgVLLLSWGPLVLEVIVGLGILGTA 261 Corynebacterium...
WP_003228363 163 IIKIQVFIIYLNAALERLKNKEWAEGTAIYYFFSDPVFGLPEYQLNLMNPLLESNF-IVVITWLVTIFELFLAASIISNI 241 Bacillus subtilis
WP_011556541 167 MLRLQVAGIYFHASVGKFKVTEWVDGTALYYWLLDPSVGAPDWLAGVMLPVLSSPV-VALLTWSVLLLELGLALGPLLNP 245 Myxococcus xanthus
EEJ38570     262 RLRKIAVFTDILLHAGFIIFIGLFSFSLVMIAAVLAASTiPVE 304 Corynebacterium pseudogenitalium ATCC 33035
WP_003228363 242 RIKRIALVLGILFHIGIIFSIGIVSFGLIMISALIIYLH-PVQ 283 Bacillus subtilis
WP_011556541 246 SLRRVLLPLGISFHLGIAVFHGLISFVLVMCGALILLLR-PFD 287 Myxococcus xanthus
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