Conserved Protein Domain Family
seco_metab_LLM

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TIGR04020: seco_metab_LLM 
natural product biosynthesis luciferase-like monooxygenase domain
This model describes a subfamily within the bacterial luciferase-like monooxygenase (LLM) family that regularly occurs within large non-ribosomal protein synthases/polyketide synthases, but also as small proteins. The LLM family includes members that bind either FMN or F420, and FMN is more likely in this case because many members are from species that lack F420 biosynthesis capability. An example member is the MupA protein of mupirocin biosynthesis in Pseudomonas fluorescens NCIMB 10586.
Statistics
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PSSM-Id: 274922
Aligned: 22 rows
Threshold Bit Score: 519.505
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEF61958      700 LSLFYFSGDESQTPGDKYRLVLEGAKFADQNGFAAVWTPERHFHQFGGLFPNPSVTSAAIAAVTKRVQIRAGSVVLPLHD 779  Pedosphaera p...
EEJ00762     1833 FALAYFGNYSSAETDATYDMICNGARLADERGFTAVWLPERHFHPFGGFSPNPSVLAAALVRETKSIHLRAGSVVLPLHH 1912 Haliangium oc...
EEJ20206     1739 FSLYFFGDYPDHAAQDKYGLILKATEYADAHGFHAVWLPERHFHSFGALFPNPSVLAAALATRTQRIRLHAGSVVLPLHH 1818 Kribbella fla...
EAM52581        3 FSLFYFDGDGSVAQPNKYRLLLESAKFADQNGFSAVWIPERHFHAFGGLYPNPSVVNAALAMATEKVQLRAGSVVLPLHH 82   Crocosphaera ...
WP_010996809    3 FSLFYFDGDGSVARPNQYQLLIESAKFADTNDFTAVWTPERHFHSFGGLYPNPTLTSAALAMITERVQLRAGSFVLPLHD 82   Nostoc sp. PC...
WP_015918427    3 FSLFYFDGDGSATNGDSYRLLMDSARFADDNGLSALWVPERHFHAFGGLYPNPSMIHAALAMVTKRVQLRSGSIVLPLHH 82   Agrobacterium...
WP_015896310    3 FSLMFFASSEEALSSNKYRLVMESARFADQNGFHGIWLPERHFTDFGSLYPNPAVLHAALATSTHHVRLMAGSVVVPLHH 82   Acidobacteriu...
WP_010982282   79 VSLFFFSADTDDHAWDKHALVLECAELADSLGLDAIWVPERHFDPFGAPYPSPGLLLAAIAARTSRIALRSGSVVLPLRD 158  Streptomyces ...
WP_011003939 2342 FGISFFGHYASGYDAQKYRLLFEAARYADAGGFSSLWLPERHFHAFGGLSPNPSVLSAALARETSHIQLRAGSVVLPLHH 2421 Ralstonia sol...
WP_011599384    7 LSVMFFSGSVPADRTDRYRLVHDAAAVADRLGYEAIWLPERHFDVFGGLFPNPSVLAAALAGTTKRCHLRAGSVVAPLHD 86   Rhodococcus j...
EEF61958      780 PIRVAEEWAMVDNISNG-RVGLSFASGWHSNDFVFAPENYPDRKSLMFQHIETVKKLWRGEQITRRGGDGKDVTLRILPK 858  Pedosphaera p...
EEJ00762     1913 PARVVEEWALIDRLSGG-RAGIALASGWHPRDFAFAPEIFGEHREHMFRHIDTVRRLWRGESVTMPIGGGSEAPIQTFPR 1991 Haliangium oc...
EEJ20206     1819 PIRVAEEWSVVDNLSGG-RAGMCVASGWHARDFVFAPDSYGRHREELYEHLDTVRRLWAGEAITATAGNGESTEVRLHPR 1897 Kribbella fla...
EAM52581       83 PVRIAEEWAVVDNLSNG-RVAIAFASGWTMDEFILSRDLHTHRKQTMWRGVKALQQLWKGEGVEYADASGRAVEAKILPK 161  Crocosphaera ...
WP_010996809   83 PVRATEEWAVVDNLSHG-RVAIAFASGWTVDDFVLAREPHAQRKAVMWRDLEVMRKLWRGEAIERQDATGKTFTVKTLPR 161  Nostoc sp. PC...
WP_015918427   83 PVRVAEEIAVVDNLSQG-RVGVAIASGWTRNEFVLSREPHGSRRSLMWRSFDQVTKLLAGETLTFEDAEGNTVEAKTLPR 161  Agrobacterium...
WP_015896310   83 PIRIAEEWSVVDNLSRG-RVGISFAPGWNPGDFALAPEKYDNRVEEMLSGIRTVQRLWRGESIDAIDGKGEPVRIKTYPT 161  Acidobacteriu...
WP_010982282  159 PLLVAEEWGVLDSLSRG-RMGISLASGWHADDFVLNPEGYERRKDVLEERLADLHTLWNGASITRKGPGGRPVEVRTYPR 237  Streptomyces ...
WP_011003939 2422 PVRVAEEWSMVDNLSQG-RVGIACASGWHPNDFVFAPEAFGSHRELMFQRIEQIQALWRGEPLRVRDGSSREIEVKLFPM 2500 Ralstonia sol...
WP_011599384   87 PIRIAEEWSVVDNLSGGgRIGLSIGSGWNTNDFVLAPDRYETRVAHSRDSIDELRALWAGRRVARRNGSGRTVEVAIQPE 166  Rhodococcus j...
EEF61958      859 PVRQNVPLWITASASPDTFRLAGEMGANVLTNLLGQTVEEVAEKIAIYRKAWREHGHGPGEGHVSLMLHTFVERDMQTVR 938  Pedosphaera p...
EEJ00762     1992 PVQDEIPLWITIVNNPKTYLRAAEEGAGILTNLMGQTIDQMSQNIALYRDALADAGRDPMSGKVTALVHTYVDESDELAI 2071 Haliangium oc...
EEJ20206     1898 PLQDQPPLYAAVVGNPESYKLAARNDIGVVTNLMAQSVEDLAANIALYRSTRAEHGLDPDAGRVVVLLHTYVGDDLEAVR 1977 Kribbella fla...
EAM52581      162 PIQPELPIWITC-QSPETFIEAGKMGANVLTSLLGGTLEEVAPKIKLYRQYLEKSGHDPDSKKVTLMIHTFLGEETETVK 240  Crocosphaera ...
WP_010996809  162 PVQNELPVWMTC-QSSETFVEAGKLGTHVLTSLLGGTLNDIVPKIQLYRKSLAKHGHDPQSGKVALMIHTFLGDDINDVK 240  Nostoc sp. PC...
WP_015918427  162 PVQPRVPFWVAC-QSMETFVEAGRRGINVLTALLGETLESLTPKIAAYRRSLEKNGFDPAAGTVSIMVHTYLGGDVETVK 240  Agrobacterium...
WP_015896310  162 PQQPELPTWLTAAGNPKTFAKAGEIGANLLTHLLDQDEEQLAVKIALYREARANSGHDPSTGIVTVMLHTFVGENQDLVR 241  Acidobacteriu...
WP_010982282  238 P-ERTPEVWLTSSRNPDTWRTAGRLNLHVLTALLEQTIDEITERVGLYHQALTEAGHPTDGRQVTCMLHTHLASDPASVE 316  Streptomyces ...
WP_011003939 2501 PRQPELPIWITIVGNPDTYRRAGEIGAGILTNLMGQTVEALECNLALYRQALVEHGHGVERSRVSVLLHTFVCEDAAEAR 2580 Ralstonia sol...
WP_011599384  167 PLSGELPLWMTASGNPDTFTAAGRLGTNLLTHLLGQDLGELACKIKLYRDARATAGHDPDSGRVTLMLHTLATADNAHAW 246  Rhodococcus j...
EEF61958      939 EKVRGPFTEYLKTSVDLVKKASS-----AWsfaafqkpgaradgSHNIDFNTLNGEDMQALLDHAFERYFETSGLFGTPD 1013 Pedosphaera p...
EEJ00762     2072 ERARQPFIDYLKSSLNLFEGLVK-----SQ--------------GLDIDLASLDDDDRTYMASMAYERYVAQSALIGAPE 2132 Haliangium oc...
EEJ20206     1978 AAAYRPFCDYLRSSLSLFGQVTN-----SL--------------GFQIDLDKTPADDVDFLLGQAYQRYCESRALIGTPD 2038 Kribbella fla...
EAM52581      241 EKVRQPFCNYLKTHYDLLENLAK-----GM--------------GLDVSLKNFSEDDLDSLLLFGVEGFMKGRSLIGTPE 301  Crocosphaera ...
WP_010996809  241 AKVTQPFCNYLKTHYDLLENLAK-----GM--------------GLNVSIKNFSEDDIDSLLQFGVEGFMKGRSLIGTPA 301  Nostoc sp. PC...
WP_015918427  241 ANVKGPFSDYLRTHYHLLEGLAR-----SM--------------GLDIALENFSRDDLDSLIEFGVEGFIKGRSLIGTPE 301  Agrobacterium...
WP_015896310  242 EQARAPFCNYISSNIGLLNGLAQ-----SR--------------GHQVDVRSMPAQELDAFVQFLYERFAESRGLIGTPE 302  Acidobacteriu...
WP_010982282  317 QRVRGPLIRYLSAHMDLFSKYAA-----GG--------------GAGIDPDEVTEADRQALLEHGLRRYMGTSGLFGSAE 377  Streptomyces ...
WP_011003939 2581 AVARAPFIHYLRSSVGLFQNMVD-----SL--------------GLQADVSTLSEDDRDYLLSVAYERYVEHSALIGSPA 2641 Ralstonia sol...
WP_011599384  247 TAARAPLRSYLRSALELELRASAgggrvSG--------------GRRIAVPALSEAVVEELLDERTRRFFDDASLLGAVP 312  Rhodococcus j...
EEF61958     1014 TCLKMVNQLKRIGVDEIACLIDFGVDVDSVLASLPYLSELN 1054 Pedosphaera parvula Ellin514
EEJ00762     2133 RCSEIVESLRQAGVDEIACFVDFGVAPEHVLDQFPALTRLR 2173 Haliangium ochraceum DSM 14365
EEJ20206     2039 SCATIVDALLAAGADEIACFVDFGVAPEQVMQSLTAVDALR 2079 Kribbella flavida DSM 17836
EAM52581      302 TCVPFIAKLEEIGINEVACLIDFVQDFDTVMESLPYLQKLH 342  Crocosphaera watsonii WH 8501
WP_010996809  302 SCLPFVEQIQAAGVDEIACLIDFVQDYDLVMASLPFVNQLK 342  Nostoc sp. PCC 7120
WP_015918427  302 STAETVEALGAAGIDEIACLIDFVQDYDLVMGGLPHLARLa 342  Agrobacterium vitis
WP_015896310  303 SCVGLVERLQDAGVNEIACLLDFGPPVDLLLQNLTHLQRLK 343  Acidobacterium capsulatum
WP_010982282  378 SCLPKVERLGAAGITELGCLVDFGLPREQVLESVEELGRLR 418  Streptomyces avermitilis
WP_011003939 2642 TCRALVERLQAIGVDEIGCFIDFGVDPDTVLGRLDQLALLK 2682 Ralstonia solanacearum
WP_011599384  313 KCLAMLEAVAAAGVDEVACLIDFGPSRQLVLDSLNRLAPLL 353  Rhodococcus jostii
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