Conserved Protein Domain Family
target_X_rSAM

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TIGR03995: target_X_rSAM 
putative rSAM target protein, CGCGG family
Members of this family of small proteins, approx. 100 amino acids in length, co-occur with a subfamily of radical SAM protein in several species in the Halobacteria and in Bacillus. The radical SAM protein belongs to a branch in which most characterized members act on peptide substrates. The lack of homology of this family to any known enzyme and the distinctive C-terminal region motif, with the common modification target residue Cys flanked by sterically permissive Gly residues.
Statistics
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PSSM-Id: 274911
Aligned: 6 rows
Threshold Bit Score: 134.922
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_02169119    3 KMLTSWSASLEHGEYAEDRDLVIRHAIEAVDETSEGIYVNIVTPHEFGNPDEYLTAVLHDHFPNSLIIDYIDQCGCGGHV 82  Bacillus seleni...
ZP_06364794    2 KQDQSWSASLEHGEYAHDQALVIQHSIEAVDETATGTYVNLVTPNEFGNPEEYLTEVLIEKFGSSINVQYKDECGCGGHV 81  Bacillus cellul...
WP_012942903  17 EHDVSWSANLEKPRHAADRDLVVSQAEDAVEATAAGTHVNLVTHGDHGRPENYLWDELEAAF-EGIDLEYVDRCGCGGHV 95  Haloterrigena t...
WP_011224831  15 VHDTSWSANLETPAHAKDPNVVVEQAIDAVEMTTAGNHVNLVSHADHGHPETYLFDALAEAFGETISVEYVQQCGCGGHV 94  Haloarcula mari...
WP_015909893  18 IHDNSWSANLEKPQYADDAELAVRDALVAIDHTTAGNHVNLVTHGDLGHPEEFLYDAIEREYG--LDPEYVEQCGCGGHV 95  Halorubrum lacu...
WP_015762636  30 VHENSWSVNLEQPAHGDDRDLVVAQAIDAIEHTASGNHVNLVTHGEHGHPETYLYDALEAR--EDVTYDYVEQCGCGGHV 107 Halomicrobium m...
ZP_02169119   83 LRVY 86  Bacillus selenitireducens MLS10
ZP_06364794   82 LRVY 85  Bacillus cellulosilyticus DSM 2522
WP_012942903  96 TRVH 99  Haloterrigena turkmenica
WP_011224831  95 TRVH 98  Haloarcula marismortui
WP_015909893  96 TRVQ 99  Halorubrum lacusprofundi
WP_015762636 108 VRVQ 111 Halomicrobium mukohataei
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