Conserved Protein Domain Family
alt_bact_glmU

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TIGR03991: alt_bact_glmU 
UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase
The MJ_1101 protein from Methanococcus jannaschii has been characterized as the GlmU enzyme catalyzing the final two steps of UDP-GlcNAc biosynthesis. Homologs of this enzyme are identified in a number of bacterial organisms and modeled here. A number of these are observed in proximity to the GlmS and GlmM genes, and phylogenetic profiling by PPP identifies the LEPBI_I0518 gene in Leptospira biflexa as a likely Glm-system candidate. Multiple sequence alignments of these bacterial homologs with their archaeal counterparts reveals significant structural differences, necessitating the construction of separate models. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan, Central intermediary metabolism, Amino sugars]
Statistics
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PSSM-Id: 274907
Aligned: 15 rows
Threshold Bit Score: 390.132
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011404674   1 MHLCLFEDDHV-AGLRP----------FVETRAA-----YDLRLAGRTVLATAADAFEpag-lvLH-A----RPLVAE-- 56  Salinibacter ruber
WP_011708957  24 MNYILFDGPSR-DNLLP----------FTFTRPV-----ADIRIGILTLREKWEKLLK------TK-T----STKTEE-- 74  Gramella forsetii
WP_011921625   1 MNYILFDGPVR-NALLP----------FTFTRPV-----ADILIGIMTIRQKWEARLGs-------tI----TTITED-- 51  Flavobacterium ...
WP_010933230   1 MQVIIVEDEKT-LRFSP----------LADLKPV-----YDLVTGCFSLRQRFVEALGarqkltWH-L----RRHIAP-- 57  Chlorobaculum t...
WP_002665434   3 IERLLFEDKNIiKDFFP----------FTFTRPS-----AELRAGILTFSERWQRLLGi-----TQ-V----SYLTAD-- 55  Capnocytophaga ...
WP_012387543   1 MN-LLFDDSKRnPSLEP----------LSRFHSF-----FEWNLGGMNLLEKLDRKYPgsk-ffYKgP----NPDFET-- 57  Leptospira biflexa
WP_011361348   1 MQIVVFEDKRV-EEFQPlvllkplyalFVGFRSLrekleYAVR-GRATLTYHIRRYLApcy-qeQH-PelvvNRLDEDdi 76  Chlorobium chlo...
WP_012309985   1 MQLVIFEDRGV-EALSP----------ITDLIPM-----QEVVVGGAKQFIRLERLLDmes-rwIV-R----DHMELR-- 56  Candidatus Kora...
WP_011119694  20 MQILCFEDSRV-EQLCP----------IVHARPA-----YAITCASFRLLD-WLKTLAsecgtgTK-A----CQIQGL-- 75  Rhodopirellula ...
WP_011357118   1 MQILVFEDALA-ERLMP----------LAGLKPV-----YGLATGFRTLREKFEHYAPgvs-ftFH-M----RRRLAR-- 56  Pelodictyon lut...
WP_011404674  57 ------------------------------------VTRHAHPEAVVNA-LPDg-------------------------- 73  Salinibacter ruber
WP_011708957  75 ------------------------------------YLSGKWPLILENE-NIF--------------------------- 90  Gramella forsetii
WP_011921625  52 ------------------------------------YLSAKFPMVEMEEnVMI--------------------------- 68  Flavobacterium ...
WP_010933230  58 ------------------------------------WFAEANPGSVVNR-VLEdevllvngrlicdaavtqfidarkiap 100 Chlorobaculum t...
WP_002665434  56 ------------------------------------YLQGKYPYTGVS----E--------------------------- 68  Capnocytophaga ...
WP_012387543  58 ------------------------------------LIFNRYPHVFPAT-LEN--------------------------- 73  Leptospira biflexa
WP_011361348  77 llvngrllgdeavaqvivegacevgsafmqngtmlfARVHRHMLIGENG-LLP--------------------------- 128 Chlorobium chlo...
WP_012309985  57 ------------------------------------VPESRKPDYG---------------------------------- 66  Candidatus Kora...
WP_011119694  76 ------------------------------------IREYLLPIQEADH-GLQapate------------------mpsd 100 Rhodopirellula ...
WP_011357118  57 ------------------------------------WYAMAYPAAPVNI-LME--------------------------- 72  Pelodictyon lut...
WP_011404674  74 GD-----------VLFL--------------N---G-RYV-----------------------------------Aegga 89  Salinibacter ruber
WP_011708957  91 IN-----------SSIVatkgiaeklktiktN---E-KLVygdnvvayfqkgtsdvdlselkeihlneeplrvanT---- 151 Gramella forsetii
WP_011921625  69 NA-----------AYLP--------------NdalA-ELV-----------------------------------Sdlke 87  Flavobacterium ...
WP_010933230 101 GE-----------ALIQ--------------N---G-NLL-----------------------------------Fcrtt 116 Chlorobaculum t...
WP_002665434  69 EV-----------TLSI--------------Y---A-NFL-----------------------------------Ptprl 84  Capnocytophaga ...
WP_012387543  74 YD-----------SIYS--------------S---N-SFL-----------------------------------P---- 85  Leptospira biflexa
WP_011361348 129 DVidterlaeqlrVEEV--------------N---GfRLL-----------------------------------Eh--- 153 Chlorobium chlo...
WP_012309985  67 SP-----------AIIL--------------N---S-RLL-----------------------------------Stdls 82  Candidatus Kora...
WP_011119694 101 ED-----------VLLV--------------N---A-RLV-----------------------------------Psvqt 116 Rhodopirellula ...
WP_011357118  73 DD-----------ILLV--------------N---G-RLV-----------------------------------Cdavt 88  Pelodictyon lut...
WP_011404674  90 arrqleaapaqdgprafvqddtlvaawvpdaa-------arlpddllarpaltagsfdglpvttlndatllrrpW----- 157 Salinibacter ruber
WP_011708957 152 --------------------------------------------------------------------------W----- 152 Gramella forsetii
WP_011921625  88 nqaifkgddviaffttenq--------------------------------eevdfdtyeiiqyneecltvehtW----- 130 Flavobacterium ...
WP_010933230 117 aeplhvletvfpdtidg------------------------------------mvlagafscvevsgfrlienlW----- 155 Chlorobaculum t...
WP_002665434  85 leqlrslevgesityq--------------------------------------grtlafvgksitlssippieWeeplv 126 Capnocytophaga ...
WP_012387543  86 --------------------------------------------------------------------------W----- 86  Leptospira biflexa
WP_011361348 154 -------------------------------------------------------------------------iW----- 155 Chlorobium chlo...
WP_012309985  83 lkldygealicgsqvvaakv-------------------------------rslewppeferakpceakllenlW----- 126 Candidatus Kora...
WP_011119694 117 yetlkqllkagetasvigkdngvdtellaafitaadvaklngsaasdadqtpmarmeelarknisprfnlkafqWp---- 192 Rhodopirellula ...
WP_011357118  89 galieagaftpgtasmqdgevlfarikpsli---------aetdgslpdlidsrrlaeglsiervegfrllsnlW----- 154 Pelodictyon lut...
WP_011404674 158 ------DLLDTLRPALARDAEGLVD----APSGAPLaERphatvheSVVGVRDEQIHLGKDTTVkPGALLNAEDGAIVLG 227 Salinibacter ruber
WP_011708957 153 ------DIFSKNGKAIELDFELLTA----GRDSQPI-DS-------SNFIKSEENIFIEEGAFV-ENASLNASEGPIYIG 213 Gramella forsetii
WP_011921625 131 ------DIFSKNDAAIRADFAFLTE----DRKSQPI-PK-------SVNVIAPENVFIEEGAKL-EFVTLNASNGPIYIG 191 Flavobacterium ...
WP_010933230 156 ------DPVAMHPAMMREDGAALAL----GRIEGEVhP--------SAILVNPSAITVEKGAEVkAGAVLDASDGFIYIG 217 Chlorobaculum t...
WP_002665434 127 lfekptDLFTYNDKAIDFDFKLLTQ----GRTSAPLsPT-------NGFLGDKADLFIEEGAKV-EFATLNCQKGKIYIG 194 Capnocytophaga ...
WP_012387543  87 ------ELLGTVTSIIEDTLNIDKEwkrfRQKYKSKqSG-------FHIVGKDKHLYIHSGATIyPGVVFDTTHGPILIE 153 Leptospira biflexa
WP_011361348 156 ------DIIALHPDELLRDAETLEL----GRIEGEVhH--------AAALVNRSNIYVGAGAVVrAGAVLDADDGFVAIG 217 Chlorobium chlo...
WP_012309985 127 ------DICPTSIVEHLRSDLMKLY----GGSEIRV----------NVNVVGRHAVVIGEGVDIlGPLTIDAREGPVIIE 186 Candidatus Kora...
WP_011119694 193 -----hEVVSSHMDAMNDSVNYRIE----HGDYTQReDG----------------VFVRPGVSIgEYGSIHTSGGAIVLE 247 Rhodopirellula ...
WP_011357118 155 ------DPVAMHPGELLRDAESLPL----GRIDGDVhP--------SAVITDPSATWVAPGAVVrAGAVLDADGGFVAVG 216 Pelodictyon lut...
WP_011404674 228 PDATVHERAVVRGPCYIGPKTHVKTGANL-EGTATGTWCKIGGEVHDALLQGFSNKSHPGFLGHSVLGQWCNLGADTNNS 306 Salinibacter ruber
WP_011708957 214 KGATIMEGSLIRGPFALCEGAMVKLGAKIyGPTTIGPNCKAGGEINNSVLFQNSNKGHDGFLGNSVLGEWCNIGADSNNS 293 Gramella forsetii
WP_011921625 192 KNTEIMEGTVIRGPFALCENAMVKMSAKVyGATTVGPGSRIGGEVKNSVLFANSNKGHEGFLGDSVLGEWCNIGADSNNS 271 Flavobacterium ...
WP_010933230 218 AGAVVEPVALLMENVYIAPGARVKSGARIySNVCIGGGAKAGGEIEDSIMEPFSNKQHDGFLGHSYISSWCNLGAGTDTS 297 Chlorobaculum t...
WP_002665434 195 KDAEVMEGSHLRGPIALCEHATVNMGAKLyGATTIGPYSKVGGEISNSVIWGYSNKGHDGFLGNSVLGQWCNLGADTNVS 274 Capnocytophaga ...
WP_012387543 154 DGVKISSFSFLEGPLFIGKNCQI-DNARItGGTLIGNQCRIGGEVENSIILDYTNKHHEGFLGHSFVSSWVNLGALSTTS 232 Leptospira biflexa
WP_011361348 218 AGAIVEPQAVLMQNVVLAPWARAKIGAKLySNVAIGMASKVGGEVEDSILEPFVNKQHDGFLGHSYLSSWCNLGAGTNTS 297 Chlorobium chlo...
WP_012309985 187 KDVLLEPYSYLKGPLYVGAGSQIVAGSRV-AGSYLGTATRVGGEVTTSVISDYSNKYHLGFLGHSYVGRWVNIGAGSITS 265 Candidatus Kora...
WP_011119694 248 EDVRVGPFCFLEGPLHAGHSTRVIEHSAIkDGVSLGHTVKIGGEVEASVIEAYTNKQHHGFLGHSYLGSWINLGAGTCNS 327 Rhodopirellula ...
WP_011357118 217 PGAVVEPLALVTENVYAGAGCRVKAAARVySNVSIGTGSKVGGEVEDSLIEPFANKQHDGFLGHSYISSWCNLGAGTTTS 296 Pelodictyon lut...
WP_011404674 307 NLKNDYGTVSAY--ApdAERFVDTGRQFAGLFMGDHSKCGINTMFNTGTVVGTNGNLFGGDFPPRYVPPFSWG-GASGL- 382 Salinibacter ruber
WP_011708957 294 NLKNNYADVRLWnyN--TENFAKTGLQFCGLIMGDHSKCGINTMFNTGTVVGVSANIFGSGFPRNFIPGFSWG-GSGGT- 369 Gramella forsetii
WP_011921625 272 NLKNNYEEVKLWsyE--TEGFAKTGLQFCGLMMGDHSKCGINTMFNTGTVVGVSANIFGSGFPRNFVPSFSWG-GAAGF- 347 Flavobacterium ...
WP_010933230 298 DLKNNYSPVSIE--T--AHGKMATGQQFLGLLMGEHSKCSIGTRFNTGTVVGISSNIFGNGMPAKYVPSFSWGdGNPGT- 372 Chlorobaculum t...
WP_002665434 275 NLKNTYNTIQLW--DyqKGGYSSSGLQFCGVLMGDHSKTAINTQLNSGTTVGVFANLFSAGFPSKYIPNFAWG-ASA--- 348 Capnocytophaga ...
WP_012387543 233 DLKNNYGIVKLK--V--GDAIVNTGTIKFGSIIGPFTKLAIGVMSNTGTVFDIASNIVES-RIQGYVPAFTWI-KPG--- 303 Leptospira biflexa
WP_011361348 298 DLKNNYSEVPLR--R--NGELVTTGLQFLGLLMGDHSKCSINSMFNTGTIVGAGANIFGGGFVPKEVPSFAWG-GSHGF- 371 Chlorobium chlo...
WP_012309985 266 NLKNTYGEVKVR--G------ASTGLSRIGAFIGDHAKLSIGTLTYAGTVIGTASHVHG--LVREEVPPFTIY-GRSLGw 334 Candidatus Kora...
WP_011119694 328 DLKNTYGKINIE--Y--GDRKMATGMQFLGCVMGDYSKSAINTGIFTGKVIGVCSMLYG--FVTSNVPSYVNY--ARLFg 399 Rhodopirellula ...
WP_011357118 297 DLKNNYGPVRIL--C--GGREEETGLRFLGLMMAEHCRSSIGTLFNTGTVAGYGCNIFGAGFPPKEIPSFAWG-GSGGF- 370 Pelodictyon lut...
WP_011404674 383 --TTYRLEKACEVAEHVMGRRDTPFTAAHRSLLAELF 417 Salinibacter ruber
WP_011708957 370 --STYKLEKVLETAQLVMQRKGVELTGEDRKILQYVF 404 Gramella forsetii
WP_011921625 348 --TTYVTKKAFETARLVMSRRNIDFDETEAAILEHIF 382 Flavobacterium johnsoniae
WP_010933230 373 --ARYEADKAVETARKVMARRKVEMSAAYEAMFRAVA 407 Chlorobaculum tepidum
WP_002665434 349 --DKYRLDEAFAVAERVMARRGIAFDQKEQDILQWLF 383 Capnocytophaga gingivalis
WP_012387543 304 --ERYRLEEFLFDTKKIMARRGMNLFEFEDLYLRKLY 338 Leptospira biflexa
WP_011361348 372 --EHYDVEKAVETARKVMARRKVTMSASYETMFRSVA 406 Chlorobium chlorochromatii
WP_012309985 335 epVEIELDSVIRTYRRMAPRRNLEPDPReekllellf 371 Candidatus Korarchaeum cryptofilum
WP_011119694 400 qtSLLPPDVMINTQARMFARRKVEQRQCDMDLIQAMY 436 Rhodopirellula baltica
WP_011357118 371 --IPHEVDRAFQTARTAMARRNVAAGPEYEAMFRSAA 405 Pelodictyon luteolum
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