Conserved Protein Domain Family
TIGR03984

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TIGR03984: TIGR03984 
CRISPR-associated protein, TIGR03984 family
Members of this protein family are found exclusively in CRISPR-containing organisms, in operon contexts with RAMP (repeat-associated mystery protein) proteins also linked to CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats).
Statistics
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PSSM-Id: 274900
Aligned: 14 rows
Threshold Bit Score: 132.076
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_06416080   55 ALLASAQAYHVARLVEGRPRVlrpATDgggaekdL------------P---LPATGRsavFEARLFDGMRELRWLHDrDG 119 Frankia sp. EUN1f
ZP_01620998   31 LLAHADDGVIWGRFDNGKLTI---ANEvftesnfP------------T---LRLSTL---QQCRIFGQEGEVLLWKS-RE 88  Lyngbya sp. PCC...
ZP_05898988   46 LIVWQFHRIVWGRWQAGAIHL---ADD-------G------------A---LDTSLI---GEMRAFNETEELHLVKK-RG 96  Selenomonas spu...
ZP_06349701   35 GFVLSPEQACFCTLRGSGADVslyGCDeta--egQ------------A---LDPDLV---FEFRLFGPNFDARWERTsGL 94  Rhodomicrobium ...
WP_009052463  41 IVCWLDYAVLFGIIHSGEIKF---YNNe------L------------P---DFNKYL---QKLRVFNEKKELYIWRS-EN 92  Thermoanaerobacter
WP_011916072  38 MVCWLCNEVLFGRVREGKIEF---YHEl------Q------------S---DFPKYL---LRIRAFNSQKEIHIWKS-QG 89  Caldicellulosir...
WP_015906772  41 IVFWLDYEVLFGTFESGKLRF---YKEl------------------sR---DFGKYL---LKARIFDENKELYLWRN-NN 92  Caldicellulosir...
WP_012865009  41 VITWSVHKVKWGYYKQGAFLF---SDGt------T------------N---VDLAYL---QDMRIFNESEELRLTVQ-HG 92  Veillonella par...
WP_012258139  37 LLAHADDGVIWGRIDNSELHT---SHGi-----aP------------AspsLHPSTL---QQARLFSPAGELLLWRD-DN 92  Chloroflexus
WP_012189467  27 LLAFAIDGVIWGKFDADRLIM---YEKs-----dLqgyneaiqasytP---FRSETL---QQMLIFGEQAQLSIWRD-DD 91  Herpetosiphon a...
ZP_06416080  120 -LGTAVLLGEdevcg----------aglakS--LPALEAIDTIGTRYLLWGRPVTGTatpagtagepgT-----DGWLVL 181 Frankia sp. EUN1f
ZP_01620998   89 -NWKWRFVGN---------------------------LEEDQIIEPQILWGTHGER------------E-----GNFTLL 123 Lyngbya sp. PCC...
ZP_05898988   97 -KFRGRYIFD------------------------KDGEGTEAVDSAAPLWGERTAC------------A-----GGYVTL 134 Selenomonas spu...
ZP_06349701   95 -TGELRICSDssatghevqlkqpnddvtekG--GEAVPYVIKRENRYLIWGEPVGKP-----------G-----EGGTKL 155 Rhodomicrobium ...
WP_009052463  93 -KFKFRYRED--------------------EvnDEDGEIVECIDAKQIMYGSKFED------------K-----GNFIEV 134 Thermoanaerobacter
WP_011916072  90 -QFKGRIREDkdi--------------eagD--GETLKKVEYIEAHQIMYGNGKNVR-----------Ki---nEEFYEI 138 Caldicellulosir...
WP_015906772  93 lVLKGRLRKDyvge-------------hkvD--EHKVEYIDVIDAQQVMFGKNFYDL-----------K-----NGFVEV 141 Caldicellulosir...
WP_012865009  93 -EIVYRYIND------------------------ETGEPVTYVDSSSRMIGEVDAGR-----------TqlnrvEGFTSL 136 Veillonella par...
WP_012258139  93 -GWRARLVVD------------------------VPGNDDDIIDEDQILWGDTVDAT-----------S-----NGFTLL 131 Chloroflexus
WP_012189467  92 -QWGSHIIRD--------------------S--------ANIIDETQILWGTHAEA------------V-----GDWTFL 125 Herpetosiphon a...
ZP_06416080  182 AD-A-RIGLMPVPMGGLEP----PDaaraga----------------------gwareEHVYLHTVEYVATDDtaHVNAA 233 Frankia sp. EUN1f
ZP_01620998  124 WDgS-QGLKHAVPLSLVTV----GDhk-----------------------------ldKPVRLVVYHYINYDD--SGVAR 167 Lyngbya sp. PCC...
ZP_05898988  135 ADaG-RGLSLTVPAEEEG----------------------------------------ERFALVTRCYIGYDPe-TQQAG 172 Selenomonas spu...
ZP_06349701  156 TS-S-RIGTLWVPVESS-----------------------------------------ARVELTAYEYFGTAK--YGNAV 190 Rhodomicrobium ...
WP_009052463 135 SE-K-RGIRYIVPKEFIGNssveELnk-----------------------------ngKRLVLHTRNYIGYNE--IGQAG 181 Thermoanaerobacter
WP_011916072 139 YD-S-RGIKYILPSELIRE----NIls-----------------------------kdSYFVLVTRNYIDYNE--IGQAG 181 Caldicellulosir...
WP_015906772 142 SE-P-RGIKYIVPKEFLLG----EKltq----------------------------sdMRLILYTRNYIGYNE--IGQAG 185 Caldicellulosir...
WP_012865009 137 VDtG-RKLSQIIPVSTTK----------------------------------------QYCYLTTRNYIGYLD--NHQAS 173 Veillonella par...
WP_012258139 132 REgS-QGMRHAVPIVVTPT----QLk-------------------------------hHQLRLRVRHYISENE--DGEAS 173 Chloroflexus
WP_012189467 126 TD-GnQGMHHLIPLDLATC----NAqksngvayqieqkpngqrqfkaklqferteadwRPAQLVLHHSIEFDE--HGIAT 198 Herpetosiphon a...
ZP_06416080  234 VVEERLSHLA 243 Frankia sp. EUN1f
ZP_01620998  168 IYLSRLVNLT 177 Lyngbya sp. PCC 8106
ZP_05898988  173 YEDMRYKAVV 182 Selenomonas sputigena ATCC 35185
ZP_06349701  191 FVGERLTGLR 200 Rhodomicrobium vannielii ATCC 17100
WP_009052463 182 FVDSRFLKVQ 191 Thermoanaerobacter
WP_011916072 182 FIDSRFVKIE 191 Caldicellulosiruptor saccharolyticus
WP_015906772 186 FIDYRFVKIE 195 Caldicellulosiruptor bescii
WP_012865009 174 YTDYRYVKIV 183 Veillonella parvula
WP_012258139 174 ITLSRLVQLl 183 Chloroflexus
WP_012189467 199 IRASRYVDLR 208 Herpetosiphon aurantiacus
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