Conserved Protein Domain Family
pyrrolys_PylB

?
TIGR03910: pyrrolys_PylB 
pyrrolysine biosynthesis radical SAM protein
This model describes a radical SAM protein, PylB, that is part of the three-gene cassette sufficient for the biosynthesis of pyrrolysine (the twenty-second amino acid) when expressed heterologously in E. coli. The pyrrolysine next is ligated to its own tRNA and incorporated at special UAG codons. [Amino acid biosynthesis, Other]
Statistics
?
PSSM-Id: 188425
Aligned: 5 rows
Threshold Bit Score: 595.968
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
EEN15949       2 VTINLEAIIDKALNRNTLSKEEIKFLLKLSDPLMKEKVFLTARELRNRYFQDRVFLYGFIYFSTYCRNDCSFCYYRKSNN 81  Desulfotomaculu...
WP_015903420   6 AVLYLPELLNHLAGGGKADRNQIKFLLSLSHDEEIERLFKTAREVRRKHFGDRVFLYGFLYFSTFCRNNCRFCQYRQANH 85  Desulfobacteriu...
WP_015945507   2 QNLKLAEILEKAKAESMLSHEDILRLLE-TTEDQFGCVAQVARELREKYFQNKIFLYGFLYFSTFCKNDCTFCLYRKSNH 80  Desulfitobacter...
WP_011500099   6 DQNDLEDYAEQIITGSEVSDENIRAMLQISDPDDMEKLHYVARHIRDNFFGNKVFMYSFVYFSTHCKNNCAFCYYNREND 85  Methanococcoide...
WP_011020212   6 ATEDLDRFGEKIIEGFQLSDDDLRALLSLESEEELEKLYYVARKVRNHYFGNRVFLNCFIYFSTYCKNQCAFCYYNCKNE 85  Methanosarcina ...
EEN15949      82 LCRRYRKTAAEVADIARALAESGVYLIDLTMGEDPLYLSDStEGQEKLLEIVRMVKESTGLPVMISPGVVAAGMLKKLKE 161 Desulfotomaculu...
WP_015903420  86 ALSRYRKNESEILAAAREMADTGVHLIDLTMGEDPELFADGdRGFERLADICRKVQQETGLPVMISPGVMPDHALKMLAD 165 Desulfobacteriu...
WP_015945507  81 SYRRYRKDRAEIIAAARALADSGVHLLDLTMGEDPLYHNTP-QGFNELLQTVREIKRETQTPVMLSPGIVSPDVLQKFKA 159 Desulfitobacter...
WP_011500099  86 -IERYRLTLEDIKKICQVLKTEEIHMVDLTMGEDPYFHNNP----ERLAELVRTVKEEVGKPIMISPGVVDNETLMLLKE 160 Methanococcoide...
WP_011020212  86 -INRYRLSREEIKETCKALKGAGFHMIDLTMGEDPYYYEEP----DRFVELVQMVKNELGLPIMISPGVMDNATLLKARE 160 Methanosarcina ...
EEN15949     162 AGADWYACYQETHNRRLYKKLRLNQSYNERWAIKVYAKTIGMLVEEGLLVGVGDSIDDIVNSLMEMKSLGAEQVRTMTFV 241 Desulfotomaculu...
WP_015903420 166 AGVTWYACYQETHTRSLYNRLRPGQDFDERMLRKRTARKLGMLIEEGLLTGVGESVDDLATSMEMMADLDAHQVRVMTFV 245 Desulfobacteriu...
WP_015945507 160 AGVDWYACYQETHNRTLYNRLRIGQSYDERMGQKSLAKAMGYLIEEGILTGVGDTHEDIAASILTMKRMEAAQVRVMSFV 239 Desulfitobacter...
WP_011500099 161 NGANFLALYQETYDKELFGKLRVEQSFEERINSRNHAKRIGYLVEDGILTAVEPDIESTLISLRGLGTSNPDMVRVMTFL 240 Methanococcoide...
WP_011020212 161 KGANFFALYQETYDQELYEKLRVGQSFKGRYNTRRFAKEQGYCIEDGILTGVGNDIESTIKSLRGMKSNDPDMVRVMTFL 240 Methanosarcina ...
EEN15949     242 PQQGTPLYGIDAPGDALELNIIAVMRILFPDRLIPASLDVKGIFGLKERLDAGANVVTSLIPPERGLVGVSQSTLDISEG 321 Desulfotomaculu...
WP_015903420 246 PQKGTPMVDVPPSENLKELIIIAVMRLLFPDRLIPASLDVDGLDGLKARLDAGANVITSIVPPQKGLAGVAHNSLDIEDA 325 Desulfobacteriu...
WP_015945507 240 PQENTPLAGWKTGSHFRELLIIAIMRLVMPDRLIPASLDVDGLRGLEQRLNSGANVVTSIIPPAAGLAGVSQSSRDIADG 319 Desulfitobacter...
WP_011500099 241 PQKGTPLEGKDVEGSEAELRMISILRLMYPNLLIPASLDLEGIDGMVHRLNSGANVVTSIISSNSALEGVVNYDREHAER 320 Methanococcoide...
WP_011020212 241 PQEGTPLERFKENSNLSELKIIAILRLIFPKCLIPASLDLEGIDGMVHRLNAGANIVTSILPSDSKLEGVANYDRDLEER 320 Methanosarcina ...
EEN15949     322 HRTVKGIMPALQSCGLKPATLAEYTKWI 349 Desulfotomaculum acetoxidans DSM 771
WP_015903420 326 RRTHDSIVPILTSCGLTVAEVGEYRSWI 353 Desulfobacterium autotrophicum
WP_015945507 320 NRSLEKIIPILNRMHLEPATRLEYQAWL 347 Desulfitobacterium hafniense
WP_011500099 321 DRDVKSVIYRLKTMGMEPAKQSDFEKLL 348 Methanococcoides burtonii
WP_011020212 321 DRDIKSVIKRLEGMGMEPAPQAEFETVL 348 Methanosarcina acetivorans
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap