Conserved Protein Domain Family
rhom_GG_sort

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TIGR03902: rhom_GG_sort 
rhomboid family GlyGly-CTERM serine protease
This model describes a rhomboid-like intramembrane serine protease. Its species distribution closely matches model TIGR03501, GlyGly-CTERM, which describes a protein targeting domain analogous to LPXTG and PEP-CTERM. In a number of species (Ralstonia eutropha ,R. metallidurans, R. solanacearum, Marinobacter aquaeolei, etc) with just one GlyGly-CTERM protein (i.e., a dedicated system), the rhombosortase and GlyGly-CTERM genes are adjacent.
Statistics
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PSSM-Id: 274845
Aligned: 63 rows
Threshold Bit Score: 90.3233
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_05876832   23 ASGSAWQLSGI-Q-HGQWWRILTGNFTHTNFAHLGMNLTGLWI-ISFIFKPAAR----TLLILLLSLSVWIGLCVLLTDM 95  Vibrio furnissi...
ZP_01167300   47 VDLLCFDYYAI-TeEYEIWRLATGHFVHSSFDHAFWDLVGFSAcAWYVESKRSNl--vVPTLLLSVTTLSIFLISPLTSI 123 Neptuniibacter ...
WP_012762816  31 yAVGLYQRETV-R-AGQWWRIVTAMWVHLDTWHWLADAMAAVG-LILLLARVLRpqaiVGALVVCGVLVQIAL-LTQPTV 106 Ralstonia picke...
WP_011700486  37 FESALFFPAAV-K-AGEWWRVPAHPFVHLSWYHLLLDAGAFLF-LYAGLDEPSRwr-rLSWVIGCGLGSLALSTLTTPLI 112 Syntrophobacter...
WP_012525146  25 gELLILDRARV-A-AGEWWRLLTGSVVHFSASHLGADALAFGI-AGALLERRGRat-fAALTLASALAVGLAVLWLEPSL 100 Anaeromyxobacte...
WP_012373626  19 EAALGYERAQI-A-AAQYWRLWTAHLVHFSWSHLFWNLLVFVP-AG-LWAERLLpdrlRLLLLLGPALIGVALYGLDPGL 94  Opitutus terrae
WP_011515796  35 HAHGLYLRDAVrL-EGQWWRLVTAMWVHLDTRHYLSDVAATAG-LMLLAGREARvresLTVLVVCGLA-AQLALLAMPAV 111 Cupriavidus met...
EYS85636      40 HAHGLYLRDAVrL-DGQWWRLATAMWVHLDGHHWLADALAATG-VLAIAARVARartlLLVLVACGIGVQV-VLLRVPAI 116 Cupriavidus sp....
WP_011827842  29 EPVLNWQPALW-L-T-EPWRAWSAVWVHLSRQHLLVNLAGGLL-VVAL-GVAARvpmrAAIAWATAWPLTQLGLLLMPDL 103 Methylibium pet...
WP_012348519  35 rEVLSWQPAR--A-GAEPWRWWSAAWVHFSDLHWLA-NLLGAL-LVALLGWFLNppraAAWAWALAWPLTHLSLLIQPQL 109 Leptothrix chol...
ZP_05876832   96 R--IYVGLSGTLHALFAFFA-LQEVL------Q----G---RRS-----SWL---LVLGVVA-KVVWEQAFGSSIG-T-- 147 Vibrio furnissi...
ZP_01167300  124 E--KYSGISGILYAYLVIACwIWLTD------N----R---GLK-----GWI---PLLIVIG-KTLLEIATASNVFaN-- 177 Neptuniibacter ...
WP_012762816 107 Q--WYGGLSGALHGLAAWGG-LRLLKpstsdvE----D---HFS-----RWIgvaLCVGVLA-KVWLEQSWLSPIA-Y-- 167 Ralstonia picke...
WP_011700486 113 AvrGLCGLSGIAHGLMAVSA-LECMTg----eR----G---DRK-----SFItgmVCFGIVVpKSIVEVLQGHVFF-Efl 174 Syntrophobacter...
WP_012525146 101 E--RYAGLSGVAYAAIVALA-LAGQR------D----P---GTMat--lSRI---ALVACVA-KLAWELSTGRMLL-A-- 155 Anaeromyxobacte...
WP_012373626  95 A--RYAGLSGVVAGVVAFLA-LVQLR------R----G---TSD-----RWFwrsVLLLLVA-KIGLEFALSEPLF-A-- 149 Opitutus terrae
WP_011515796 112 G--WYGGLSGATHGLALWTA-LRLLQ------A----P---GWS-----RLIgvvTCVIVLG-KVWLEQSWLAAVV-F-- 166 Cupriavidus met...
EYS85636     117 A--WYGGLSGALHGLALWGA-LGLLR------A----SglaRVT-----GVL---LCLGVLA-KVWVEQSWLAPVV-F-- 171 Cupriavidus sp....
WP_011827842 104 L--RYAGLSGVLHAGVAIVA-VVLLR------RadaaS---RRL-----GGA---IVAVLAV-KLLSETPWRGPLA-H-- 159 Methylibium pet...
WP_012348519 110 Q--RYGGLSGVLHAGVAVCA-TGLCL------R----G---RSTgerglGAA---VLAGLLL-KVALEQPWAGPLI-H-- 166 Leptothrix chol...
ZP_05876832  148 -E-QLIHARVaTEAHLAGVIGGLGLAY 172 Vibrio furnissii CIP 102972
ZP_01167300  178 -Q-GW---ELfYPAHLLGLMTGTIIMM 199 Neptuniibacter caesariensis
WP_012762816 168 -D-PHWGFGVvRIAHAFGAVSGLLVWV 192 Ralstonia pickettii
WP_011700486 175 hF-GLMGSPV-PACHAGGVLSGILMFL 199 Syntrophobacter fumaroxidans
WP_012525146 156 -G-APPGVVAvPLAHLAGAITAVAVsg 180 Anaeromyxobacter sp. K
WP_012373626 150 -RfAETGVRAvPLAHAAGVLGAGLILF 175 Opitutus terrae
WP_011515796 167 -D-PSWGFGVvrgahaagavaglgcwl 191 Cupriavidus metallidurans
EYS85636     172 -D-PAWGFGVvRIAHAAGAVAGLLCWV 196 Cupriavidus sp. SK-4
WP_011827842 160 -P-EGWDIAVaPLAHSTGAIAGallar 184 Methylibium petroleiphilum
WP_012348519 167 -V-AGWDIAIaPLAHAGGVFWGTLLGA 191 Leptothrix cholodnii
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