Conserved Protein Domain Family
MYXO-CTERM

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TIGR03901: MYXO-CTERM 
MYXO-CTERM domain
This model describes MYXO-CTERM, a C-terminal putative protein sorting domain, analogous to LPXTG (TIGR01167) and PEP-CTERM (TIGR02595). It is restricted to the Myxococcales, a division of the Deltaproteobacteria, with over 60 members occurring in Plesiocystis pacifica SIR-1. An example protein is TraA, involved in outer membrane exchange (lipids and proteins) through which one strain of Myxococcus can repair a mobility defect in another. The trusted cutoff for this model is set artificially high to avoid false positives, and consequently only about half of all members are recognized.
Statistics
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PSSM-Id: 274844
Aligned: 102 rows
Threshold Bit Score: 28.2975
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_01906167   519 GCAhCSTTEDGSsspwglafGGLGLLGLGALLRHR--RR 555  Plesiocystis pacifica SIR-1
WP_012828461  552 GCS-TRTGTAPGa-------GALLLGGLVLLTLRR--RR 580  Haliangium ochraceum
WP_012828459  555 GCS-ARSGAAPGa-------GALLLGGFVLLALRR--RR 583  Haliangium ochraceum
WP_012239347  420 GCA-VVAGDATPks----syAAVVAMGLALLTLrrrqrn 453  Sorangium cellulosum
WP_020741592  339 GC--VAAGASATgs----swAAALAVGLSALAMRR--RR 369  Sorangium cellulosum
WP_012236195 1122 GCD-CRMGRAPMp------rEAWGMLLILAAVLRR--RG 1151 Sorangium cellulosum
WP_012235928  421 GCR-TAAGQGP---------VAAAALALVALAGLR--RR 447  Sorangium cellulosum
WP_012232703 1383 gCA-CTVGAEGDggrs--apwALLAAGACAAVLHR--RR 1416 Sorangium cellulosum
WP_012098166  417 ggcgnpvGNGPAa-------LAWFVSVVFGIRSLR--RS 446  Anaeromyxobacter sp. Fw109-5
WP_011985956  446 daypvvaasgggcgtggggalaiaLVGAVLAWTRRgpRP 484  Anaeromyxobacter sp. Fw109-5
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