Conserved Protein Domain Family
chp_P_marinus_1

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TIGR03894: chp_P_marinus_1 
conserved hypothetical protein, TIGR03894 family
This protein family is restricted to the Prochlorococcus and Synechococcus lineages of the Cyanobacteria, and is sporadic in those lineages. Members average 100 amino acids in length, including a 30-residue, highly polar, low complexity region sandwiched between an N-terminal region of about 60 residues and a C-terminal [KR]VVR[KR]RS motif, both well-conserved. The function is unknown. [Hypothetical proteins, Conserved]
Statistics
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PSSM-Id: 188409
Aligned: 6 rows
Threshold Bit Score: 118.389
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011359811   3 ADKELLKEVALELWNTTKKLRPGLPKAPRAQLVLKALLTLGDISDQLQAAMILGVIEAQEPDDEPIETK-ESeETVEDKT 81  Synechococcus s...
WP_011127264   3 ADHALLKEVALELWNTTKKLRPGLPKAPRAQLVLKALMIIGDVSDQLEAAMVLGLIAEQEPDDASDQPE-DG-EDKTVDQ 80  Synechococcus s...
WP_011131975   3 VDRELLKEVTQELWNTVKKLRPEIDRETRLQLVLKALLTIGDLPDQLQAAMVVGVCAEMDKSDFENADG-NS-NTKEESN 80  Prochlorococcus...
WP_011124563   3 TDKALMKEVTKELWQSVKKLRPDLGKDPRMQLVLKALITIGDLPNPIEAAMVVATCLEMEEDEGSNEGE-VK-ESTNKND 80  Prochlorococcus...
WP_011365492   3 ADKELLKEVALELWNTTKKLRPGLPKAPRAQLVLKALLTIGDMSDQLEAAMVLGVIEAQEPDDEPGQGEaAG-EDKTVTE 81  Synechococcus s...
WP_011619711   2 ADKELLKEVGKELWGSVKKLRPGLPRESRLELTLKALMVIGDLSDQVQAAVVVGLIAEQEPPENEPEGK-DV-TTSADSE 79  Synechococcus s...
WP_011359811  82 AELEESRSTPRVVRKRS 98  Synechococcus sp. CC9902
WP_011127264  81 QETDSSRTTPRVVRKRS 97  Synechococcus sp. WH 8102
WP_011131975  81 STSVDTSTGRKVFRRSS 97  Prochlorococcus marinus
WP_011124563  81 STSESSSEGRRTVRRRS 97  Prochlorococcus marinus
WP_011365492  82 TEAKTERETPRVVRKRS 98  Synechococcus sp. CC9605
WP_011619711  80 PDVEQTPDGrrvvrrrs 96  Synechococcus sp. CC9311
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