Conserved Protein Domain Family
cyclo_dehyd_2

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TIGR03882: cyclo_dehyd_2 
bacteriocin biosynthesis cyclodehydratase domain
This model describes a ThiF-like domain of a fusion protein found in clusters associated with the production of TOMMs (thiazole/oxazole-modified microcins), small bacteriocins with characteristic heterocycle modifications. This domain is presumed to act as a cyclodehydratase, as do members of the SagC family modeled by TIGR03603.
Statistics
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PSSM-Id: 274832
Aligned: 35 rows
Threshold Bit Score: 86.6417
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_04220232   68 IPWLRGFISFGEGVIGPYVQPDQPGCSHCADARRIIAGYDRKEMW-ELQRtllmeNEHHVEKDIYATKNGLLQMSHLICA 146 Bacillus cereus...
ABC02784      53 GPILWLNEDDQGFWIGPATRSGRPGCPECVRRRNLAMRTATG-------------APRSRPRPRPALGLALLTVAALAET 119 Actinomadura me...
ACS83760      58 RPVLPVLAEPGRVRVGPLERPGEPGCSDCLSLR--RHRAASRSAE-RAAAwlrhgPDLAATPSPLLAPVALDLVAELVTA 134 Nonomuraea sp. ...
ACS50130      83 TPRLPVRVELGRVVVGPMVVPGRAGCARCARTRRERAVGPDSPRA-ELVRrf--gERLADHPAPVLTAWACDAVAELVAD 159 Streptomyces hy...
ACR48336      78 RSLLFVGSWRSLVYIGPVWRPGTQGCPRCLVTRTANSPFGPGLEG-DSLAe---sWPHGADVRIW-GPGVLRLVEEYVRA 152 Streptomyces ac...
ZP_04607685   18 APVLPVYGLRGRLVVGPLVEAGDAGCPNCLALRVRALNRPEAGTD-DPAPv---aVPLSGRDVPW-PAAAIRMAAAVVAD 92  Micromonospora ...
ACN80652      66 TVVVPVYGLRGRVVVGPVMRPGQPGCPHCLALRVRAADGPEGVPA-GAEAa---pRRLSARRAGWLPPGALRLVAAVVRD 141 Streptomyces si...
ZP_05505201    8 VALVPVRFDGPLAVVGPLLAPGAPACLCCAEYQRLATAGGRVPRQ-SPGL------ALAGVPSPALAESLAALVRDLLDG 80  Streptomyces sp. C
ZP_04704269   61 AGAVPVRLYGRQAVVGPFPGEREQPCARCLERRWQAVRSVTLREA-LELGs----GTRAAGENPYLTVFGAEAVAGLIAA 135 Streptomyces al...
WP_012013663  45 ergpRVLLYGQLALIGPV--PPAAACSTCLARRWQAVRHRDLRDAvELGG-----DTIAAGPWPYATPLVADFLHALIAA 117 Salinispora tro...
ZP_04220232  147 ETEKI--LTNQHASLQEEILLCNMQTFQCSRHVFLPDPLC--PMCSsLPDDTEEAAH-ISLQTCFKTSHDSYRCRSIDNl 221 Bacillus cereus...
ABC02784     120 RLTGL--RA---GAVPDDLLRLDPDTLEVSRHPLLPDPTC--PLCGgLPADTPEAAA-ITLVSRPKPGVETFRAHEVDA- 190 Actinomadura me...
ACS83760     135 LV-------TAPAPAHRGILLADLSDLSVTPHAFLPDPFC--PRCGtLPDDDPARAR-ITLVPRPKPSPDRHRVWDAEGr 204 Nonomuraea sp. ...
ACS50130     160 ELRFP--GG---RLTRCGLVMLSLTTMTVDAHPFLPDPRC--PECGgLPDDR--PPE-LLGTARPKPDRDTYRVRDLRAd 229 Streptomyces hy...
ACR48336     153 RLASC--K-GPAGPADGRVLVLDGAAGTVEQQTLLPDSGC--PNCGsLREDTVPALT-PAAVPLTKLTPATLRTGRLPA- 225 Streptomyces ac...
ZP_04607685   93 EVRRL--EAGTGPRTRGAAFVVDVARISADWHEVVPHHACasATCRsARRPVPPPHP-DLARRLPARSATSGRRFSLDHy 169 Micromonospora ...
ACN80652     142 EAERL--AAGVPPRGVDAAFAVGPARLTGDWHPALPHTLCtaPHCLgSRRPLPPPVP-DLSRPLPTTGVGSARRVPAARy 218 Streptomyces si...
ZP_05505201   81 HARPE--PA--QDPPTAAVHLLHQGRGTWSGHRIRPVGGC--AVCHpLPADSAAPAApLPAAPRPLPDPYLLRAPNPRTt 154 Streptomyces sp. C
ZP_04704269  136 RLGGR----GPETGAFAAVHLVDLQTLRTRHYPLVPDPEC--PRCSvAEEDTAEAAT-LTLGPAPKHRPGSFRVRDLAT- 207 Streptomyces al...
WP_012013663 118 RRTTDtgPASTGTGAPSTVFQVDLSTLRVHQVPLLPDPEC--PGCGdMVADASELAV-IGLPATPKAESGTFRGRDLDD- 193 Salinispora tro...
ZP_04220232  222 NTFLTKDYLDYRTGLF 237 Bacillus cereus Rock3-44
ABC02784     191 -AELRRRFVDDHHGVV 205 Actinomadura melliaura
ACS83760     205 LDRLRQIYVDDHCGLV 220 Nonomuraea sp. WU8817
ACS50130     230 WEALTRTYVDGHTGVV 245 Streptomyces hygroscopicus
ACR48336     226 -DAVRGDYLYAGLGLF 240 Streptomyces actuosus
ZP_04607685  170 RQVRDSGYLDAWSGVI 185 Micromonospora sp. ATCC 39149
ACN80652     219 ADRLEQEYLDAWSGLT 234 Streptomyces sioyaensis
ZP_05505201  155 AAGLRAALYDERFGPV 170 Streptomyces sp. C
ZP_04704269  208 YELPIQPYANPLCGSL 223 Streptomyces albus J1074
WP_012013663 194 YPLNVAAFANPVCGAL 209 Salinispora tropica
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