Conserved Protein Domain Family
chitin_NgcE

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TIGR03851: chitin_NgcE 
carbohydrate ABC transporter, N-acetylglucosamine/diacetylchitobiose-binding protein
Members of this protein family are the substrate-binding protein, a lipid-anchored protein of Gram-positive bacteria in all examples found so far, that include NgcE of the chitin-degrader, Streptomyces olivaceoviridis, and close homologs from other species likely to share the same function. NgcE binds both N-acetylglucosamine and the chitin dimer, N,N'-diacetylchitobiose. [Transport and binding proteins, Carbohydrates, organic alcohols, and acids]
Statistics
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PSSM-Id: 274816
Aligned: 11 rows
Threshold Bit Score: 642.15
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EEP15404      13 GPGAGLLSACATGGGSSPAATTSAAPsa--ggAVSAANPFGVAADAPLEVVIFK--GGLGDSYATEvHEPLYKKAFPKAT 88  Streptosporangi...
EEJ19012      24 TGGSTLLAGCASGGSEDDAGSGGGGA------EKTNDNPFGVKDSDPLDVVIFK--GGYGDDYAKA-HQALYKKKYGAAE 94  Kribbella flavi...
EEP15913      22 GPGAGLLSACATAGSGSGAGSAPAAAtp---aATSAANPFGVDPGKPLEVVIFN--GGNGDGYATGlHQPLYRKTYPRAE 96  Streptosporangi...
EEP12324      17 GLALPVLSACASPAGGGGASPAAPAAg-----ATSAANPLGLAESKPLEVWIFD--GGFGDAYAKDvHEPLVKGKFPKLE 89  Streptosporangi...
EEJ19015      11 ALAGALLSGCSSNEPSGGP-------------ARTADNPFAVSGDLPLEVMVSEeyGGF--------AAPQYRRKFAQAT 69  Kribbella flavi...
EEP58570      21 GTGAVALSACATGSGGDDADADGGGAvaegggDVSDDNPFGVAEDSSVDVVIFN--GGYGDQYAID-AGEKFEELFPSVT 97  Brachybacterium...
EAP98947       8 AVPALSLAGCATGGGSDEPTATAAGG------AKSDTNPFGLADKATVEAVIFN--GGYGFDYVTF-AATLAQKNHAGST 78  Janibacter sp. ...
WP_011773366  24 VPMGGTIASCAAGGGSTTAGPTG---------TVSDTNPFGMAEKATLDAVIFK--GGYGIDYVEF-AGKIFEKTHEGST 91  Arthrobacter au...
WP_012378580  31 VPTMSFLSACASGDSSSDDKVEKG--------EKTEKNPLAVNGSAPLDIVIFD--GGFGTKYAED-AKAVYEKTYPEAK 99  Streptomyces gr...
WP_011030591  21 AAMGSFAVACSSPSSEDKESDSGPKG------EKSANNPFGAAANSTVEAAIFD--GGYGTDYVDY-ANQVLGSQVKGLK 91  Streptomyces co...
WP_012183308  24 LPAAGVLSACAGSEPAQDDSS---GA------AKSKDNPFGVKDDSSVKVVIFN--GGLGDQWAKE-DEAVFKAKYPNIT 91  Salinispora are...
EEP15404      89 VKHVATQQIAQTLQPRFAGGDVPDMIANSGTDLMDNGALQQEGQLLELTELWDAPSIDDPAKKVRDTVAPGTVESGLIDN 168 Streptosporangi...
EEJ19012      95 IKHAGITDITPQLQPRFNGGNPPDVIDNSGASLLPMSTLASTGQLADLTELFDAPSIDDPNKKVRDTVEPITLEAAMLEG 174 Kribbella flavi...
EEP15913      97 IKHVPTQKIGTQLRPRFVSGDVPDVVNNSGPEALDMAALTAEGHLADLSMLFDAPSVDDPGKKVRDTLVGGAHENSLIDG 176 Streptosporangi...
EEP12324      90 IKHNTTKEIAKTLQPRFAGGNPPEFINNSGANAMDFGALVQDGQLADLTPLYDAPSWDDPAVKVRETIDPAAIELGSYDG 169 Streptosporangi...
EEJ19015      70 VSVTPTKQLRDLLQSRFAAGSPPDVVLSTGEKALSVSRLVADGHLTDLGPLLSAPSWDNPGVAVEDAMLPGLLDSGRYDG 149 Kribbella flavi...
EEP58570      98 VDVSSTVNIQPDLQPRFIGGDPPDLFDNSGAQSMNASALISEGSLSELQPLVDAPSLD--GGTIGDSLLPGVLTPGTYSG 175 Brachybacterium...
EAP98947      79 FTVKPSTQIAQELQPRFVGGNPPDLIDNSGANAIGLNTIAD--QLEDLKSVFEAKNVE--GTVIKDTLYPGVEAPGTING 154 Janibacter sp. ...
WP_011773366  92 AKISPSTDIAQELQPRFVGGNPPDLIDNSGAKRIGFSTILP--QLEDLTSVVEAKNLE--GKVIKDTLYGGVLAPGTFEG 167 Arthrobacter au...
WP_012378580 100 VKFSATQKIQSVLQPRFNGGTPPDLIDNSGAQQMDMGVLVGKKQLTDLTPLLDAPSIDDPAKKVRDTLRPGIIEMGQFDG 179 Streptomyces gr...
WP_011030591  92 VQVKPVVDIAPQLQPRFVGGNPPDLIDNSGEDQIGFLGILD--QLEELDDLFEASTYE--GKKIADIVYPGVKDPGTFKD 167 Streptomyces co...
WP_012183308  92 VNMSSTQKIKTEEQPKMAT-RPSDVVMNSGADIMDISTLINESAIEPLDDLLDAPAWDSEG-TVADTLLPGTVSDGTFQG 169 Salinispora are...
EEP15404     169 KP-YLMNYVFSAYGLWYDSVLFEKNGWTPPKTFEEFKAFCEKAKAAG-ITPFAYAGKNaSYYAYWMILISAAKIEGNQLL 246 Streptosporangi...
EEJ19012     175 KP-LVLDYVLTVYALWYNKKLFAEKGWQPAKTWTEFLALCEEIKKAG-IAPLAHQGKH-PYYIGQILLDMAVKHGGPEVI 251 Kribbella flavi...
EEP15913     177 VP-HVLNYTVAHRALWYNAKLFADKGWTVPRTWDAFLALGEETRRAG-ITLFAYPGQVgPFYQVWNLVYTAAKIGGNQVV 254 Streptosporangi...
EEP12324     170 KP-YVLNYANTVWGIWYSQKLFEAEGWQPPKTWAEFLQLCEAIKKSGkMAPFTYAGKH-PFYIYETILTLAAKIGGKDVL 247 Streptosporangi...
EEJ19015     150 TL-RALNYLVDVYGLWYSARLFQQHGWDVPRTWPELLALGAEMKAVG-VGPFTYAGMH-PYYVLEAVLTLAAKTGGHDVV 226 Kribbella flavi...
EEP58570     176 KL-YALNYMYTVFALWYSATQFEEKGWEVPATWDDVMAIGEEAKSDD-LALFAWGGQNaADYFHELALSMAIKEGGPEVA 253 Brachybacterium...
EAP98947     155 KL-VAINYVQTVYAIWYSGSLFEANGWTAPKTWDEAIELGAKAKAKG-KFLMLW-GKEaATYYQTLAISSAIKEGGDDVR 231 Janibacter sp. ...
WP_011773366 168 KL-AAVNYVLTVYALWYSDSLLKENGWTVPKTWDELYALGEQAKAKG-KYLFVW-GKEaATYYQELAIDSAIKEGGDEVR 244 Arthrobacter au...
WP_012378580 180 DPvWIMYYAYTVYGVWYSQTALEKLDATYPETWDDMLALCAKAKKKG-IAGWTYPGKH-PYYLPFSLYPFIGKIGGVEVL 257 Streptomyces gr...
WP_011030591 168 KF-VALNYVMTVYGVWYSKTLFEENGWTPPKTWDEALDLGQEAKKKG-KYLFVH-GKEaATYYRTLLIDSAIKEGGDEVR 244 Streptomyces co...
WP_012183308 170 KF-YVVNIAYTVWGNWYNAALFDKEGWQPPKTFDEFFALAPKIKAKG-MAPYVYDAVHg-YYPRWALMATIWKSAGKQAV 246 Salinispora are...
EEP15404     247 IDIDNLVDGVWKRDSVKQSAAAWAEIGK--YMDKSFEGLIHTDVQTRQNQG-K-IALYPTGSWLENEQKSQTPKEFKYAL 322 Streptosporangi...
EEJ19012     252 KAIDSLEPNAWKHPSIKLAAEALLELKGkgYIMQGTEGLDHIQSQTAWNQG-K-AAFIPSGSWLENEQKPVAPKDFETTA 329 Kribbella flavi...
EEP15913     255 IDIDNLADGAWTSPAVLASVTAWADLQAr-YGDKSYFGLDHTQTQVKHLQD-K-VAFYPCGSWLDNEMAKDKPDSFEYAI 331 Streptosporangi...
EEP12324     248 KNIDNLEDGAWQAEPVKQAATAFAELGAk-YLLQGTAGLDHVQTQTAHNKG-Q-VAMLPCGSWLENEQKDSTPADFGYAM 324 Streptosporangi...
EEJ19015     227 KRIDNLEDGAWKDQSVTRAITAFGELTRrgLIATGSTNLDHTGSQTLLMRS-K-AGLLPCGNWLENEMKSVIPPNFGLTM 304 Kribbella flavi...
EEP58570     254 KVLDRLEEGAYEQPTVVDAFAAIEDAVKegYFLSGGAGIKHTEAQTEWVMG-K-AVMYPSGSWIENEQRSTTPDDYDMTG 331 Brachybacterium...
EAP98947     232 LGLENLKPDSWSHAAVQGVFKALETIIKngYMKPGGGGTQFTAAQAQWSSEeA-ALLYPSGSWIENEMKKQTKADFKMTG 310 Janibacter sp. ...
WP_011773366 245 LGLENLKEGCWSHPAIQSVFTALDKIVKagFFKPGGSGTQFTAAQAQWSNA-QdAVFYPSGSWIENEMKDQTKAGFNMMG 323 Arthrobacter au...
WP_012378580 258 DAIDNLEPKAWEHPAVKAAFDAYYELVAkdYILEGTPGLDHRGSQGAWARG-K-ALFIPNGSWVENEEAAIIPKDFKLSV 335 Streptomyces gr...
WP_011030591 245 LALENLEKGCWSHPAVQGVIKVMETMVKqkMFVPGGSGTQFQKAQAIWSNDqK-ALLYPSGGWIENEMKKATKADFQMTG 323 Streptomyces co...
WP_012183308 247 IDIDNLKENAWKADGVLPALQAWEKLVKdkLLLPGK--LDHTQSQQAWLDG-K-AAFIQLGTWLKNEMAETIPPGFEMKL 322 Salinispora are...
EEP15404     323 TPTPSVTAAdKLPFEAIRAAAGEAYIVPAKSKNPKGGLEYLRIMLSKEGARGFTEKSGNITVVTGA--ADGLDLSPGNAS 400 Streptosporangi...
EEJ19012     330 AYTPLLDGA-KLPVDCTQISAGENFIVPAKAKNKAGGLEYLRIMLSKEAAGKFTELTGSPTVVKGA--GEGLKLSPGAAS 406 Kribbella flavi...
EEP15913     332 APVPSVTATdKMPAEAIMVGVSEAFFVSAKGGNLAGGLEYLRIMLSREGARGYTERTKNLTVVNGV--AEGLDLPPAVRS 409 Streptosporangi...
EEP12324     325 FALPDFGSSdALPYGTLHARPGEEYIVPARSANPQAGLEYMRAMLSKEGAGKFMELVSTLTVVKGA--GEGRTLKPGLKS 402 Streptosporangi...
EEJ19015     305 FGLPPLDGSpALPRG-VHVAPTAPLVVAAKGKNGSGGVEYLRAMLSKEVAAQVTAETNRLTVVRGG--ADGQEIGTALRS 381 Kribbella flavi...
EEP58570     332 APTPMLSDGaAMGPAAIHGAAGEPFMVPSKAANGAGGLEFLRVMLSKEQCENFSKLTSSMTIVKDTipEDGFG-STALSS 410 Brachybacterium...
EAP98947     311 APEMTLTGGsKLPYTALHSAAGEPFIVPTKAKSAAGGKELLRVMLSKEAATNFAKTKLSPTIVKDTvpEDGFG-STALQA 389 Janibacter sp. ...
WP_011773366 324 APVPTLTSSpKMPYTALHSAAGEPFIVPSQGKNAAGGKELLRIMLSKEAATNFAKTKLAPTIVKDTvpADGFG-STALVS 402 Arthrobacter au...
WP_012378580 336 GAPSSLDSSdKLPFGTLWASGGEPFIVPSKAKNPEGGMEQLRIMLSEDSSKSFTSSTKSLSAFNGG--TDGIELSDGLKS 413 Streptomyces gr...
WP_011030591 324 IPSMTLTDKpALPYEALRAAAGEPFIVPKQGKNPAGGKEVLRAMLSEKAAANFSKTKLAPTIVKGTvpADGYG-STALVS 402 Streptomyces co...
WP_012183308 323 SDYWSLGASdKAPND-VYAGAGEGIVVPSKAPNKAAAKEFLRAMLSKEGSAKFAELTKSLASTKGS--GDNVQDS-ALAS 398 Salinispora are...
EEP15404     401 LSAAQTAAGSNIVTRsDFENWYKELETDLR--KHTNALMFGRISADEFCEKMQKAADKTKADSSITKQ 466 Streptosporangium roseum DS...
EEJ19012     407 SSALLASGGTNNWVT-YFATWYSTMDKPIR--SVYGELAAARITADEFCNRAQKIADDTAKDPKTKKQ 471 Kribbella flavida DSM 17836
EEP15913     410 AARAQDAAGRNTITDaRFESWYKELFDYSQ--TQTNAVMAGRATPEQFCANMQKKADEIKKDPSVTKQ 475 Streptosporangium roseum DS...
EEP12324     403 ASAALTAAGDNAV-WfLFRKWYVEMHDEVA--AATGQFMNGKLTVDQWIERAQKKADSIKNDSSVKKF 467 Streptosporangium roseum DS...
EEJ19015     382 ARDLLSAAGDQAITW-YFADWYPAFGKTAG--ELTGQFLAGAFRVDEWAARVQAAADRIKQDRNITKY 446 Kribbella flavida DSM 17836
EEP58570     411 VSSMISEAGEDVFTF-NFTDWY-GMGDTFK--PLWAEFLNGDITAEEARERSQSAIDKIREDDSAEKF 474 Brachybacterium faecium DSM...
EAP98947     390 QGKMLKDAGSDVFTW-NFIDNY-GMNQDML--VPWNAFLSGQIDAAKLTSELQKITDKVANDSSVKKV 453 Janibacter sp. HTCC2649
WP_011773366 403 QTKLLEDAGDDIFTW-TFVDLY-GTNKDQL--VVWNTFLDGKSDVATLTSALQNITDKVRNDSSVKKI 466 Arthrobacter aurescens
WP_012378580 414 GVAALEKAGTNVVNP-RLQDWYVKLQKEQIgvAALGEMMAGRAKPAETIKKIQAFADATAKDQSIKHF 480 Streptomyces griseus
WP_011030591 403 QTKMLEAAGTNIFNY-MFVETY-GLNTDQL--VPWNSFLAGDLDGKGLTSALQKISDKVREDDSVDKV 466 Streptomyces coelicolor
WP_012183308 399 ANELMSNAPQDLVSF-KFWNFYADLDKASQ--NFCAELMAGRLTAQEFVDGMQAAADKVAKDSSVKKQ 463 Salinispora arenicola
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