Conserved Protein Domain Family
EarP

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TIGR03837: EarP 
Elongation-Factor P (EF-P) rhamnosyltransferase EarP
This model describes a conserved protein that typically is encoded next to the gene efp for translation elongation factor P.
Statistics
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PSSM-Id: 274809
Aligned: 30 rows
Threshold Bit Score: 394.714
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011072321  10 WDIFCTVVDNYGDIGVTWRLAKQLVNEYHIPIILWVDDLNSFSHILPTLNPKLVSQCFNGVIINHW--TTPL-----AVp 82  Shewanella onei...
WP_011111509   3 WDIFCHVVDNYGDIGICWRLARQLVTEFDISVRMLVDDLGAMQRICPAIDPRLAVQNIRGVEILHW--VEPF-----AD- 74  Nitrosomonas eu...
WP_011634372   4 WDIFCHVVDNYGDVGVCWRLARQLATEFGMTVRLLVDDLGSLQRICPEVDSNLTAQYIRNIQILHW--IEPF-----PN- 75  Nitrosomonas eu...
WP_011287783   5 WDIFCRVIDNYGDIGICWRLARQLAVEHGRRVRLWVDDPSSLQPLCPAVDPAIDGYSCHGVEIRHW--RENS-----LF- 76  Dechloromonas a...
WP_011865714  10 WDIFCAVVDNYGDIGVTWRLAKQLAKEYGLAVTLWVDDLASFGHILPKLDPLCGSQSFEGVCIKLW--DAPL-----SQe 82  Shewanella loihica
WP_011479976   3 WDIFCRIVDNYGDIGVCWRLAKQLAQAHGIQVRLWIDQPGIAAKLVPELDPALPAQTVSGVEICHW--TLPF-----PQ- 74  Methylobacillus...
WP_011496430   9 WDIFCLVVDNFGDIGVTWRLAKQLHKEYGIHVTLWVDCLASFAHILPALDIKQRSQHFDGVTIKLW--DQPLs----QD- 81  Shewanella deni...
WP_012418173   3 aDIFCRVVDNFGDIGVCWRLARRLSQGHGWQVRLWVDDLHAFARLQAEVDPALARQRVQQIDIVDW--N-DL-----TE- 73  Bordetella avium
KDD15307       3 aDIFCRVIDNLGDIGVCWRLARRLAHGRHWQVRLWVDDLAAFARIQPGIVPDRDQQVCDTIEILRWddRAEW-----PQ- 76  Bordetella bron...
WP_011902259   3 WDIFCQIVDNYGDAGVCWRLARSLSSLHGQEVRIFCDDLPTLNLLASGVDP----RIKEKIDIQPW--EASHenvrhPV- 75  Polynucleobacte...
WP_011072321  83 YLPGKVLIEAFACELPDEVKLQL----AtlhktAPQAVP---------L---------WLNLEYLSAEDWVDGCHGLPSM 140 Shewanella onei...
WP_011111509  75 LVPADVVIEAFGCELPPRYIAAM----A-----AASPRFsepegktdrI---------WINLEYLSAEQWVEGCHGLASP 136 Nitrosomonas eu...
WP_011634372  76 LVPADVVIEAFGCELPANYVMAM----AmavasSQAVDS---------VdmkekegcmWINLEYLSTESWVEGYHRLASP 142 Nitrosomonas eu...
WP_011287783  77 DRPAEVVIEAFACDLPNAYLASM----A-----SADPKP---------C---------WINLEYLTAESWADGCHGMASP 129 Dechloromonas a...
WP_011865714  83 YLPGEVLIEAFACELPPEVLGKI----Akl-hqLGDKVP---------V---------WLNLEYLSAEDWVEGCHGLPSL 139 Shewanella loihica
WP_011479976  75 TAAADVVIEAFGCDLPPAYLHAM----Q-----A--SRP---------V---------WINLEYLSAERWVDDFHARAST 125 Methylobacillus...
WP_011496430  82 YCAGDVLIEAFACELPASVKDELsrlnA-----AKQTVP---------V---------WLNLEYLCAEAWVDGCHGLPSM 138 Shewanella deni...
WP_012418173  74 LEPGDVVIEAFACDPPALFLAAM-----------RKRPP---------V---------WINLEYLSAEAWVETCHGLPS- 123 Bordetella avium
KDD15307      77 T-PGDVVIEAFACDPPPAYVAAM-----------RRVQP---------V---------WINLEYLSAEAWVETCHGLPS- 125 Bordetella bron...
WP_011902259  76 KVP-DVVVEAFGCELPERYLTNL----F-----IAPIKP---------I---------IINLEYLSAEPWVSEFHGKASP 127 Polynucleobacte...
WP_011072321 141 Qv-sGIKKYFYFPGFTPKTGGLICERELFAERDAWQQDPANKLQLFESLGLk-----D-IQAQDSVFSIFSYETDSLPAL 213 Shewanella onei...
WP_011111509 137 HpslPLIKYFFFPGFTAATGGLLREAELFTLRDASRTDPAG---LWRELGI------TnPAADEATVSLFCYDSAPISDL 207 Nitrosomonas eu...
WP_011634372 143 HprlPLTKYFFFPGFTAATGGVIQEAGLFAQRDSLQSDPA---KLWHELSI------PvPASDETIVSLFCYDHAPVGHL 213 Nitrosomonas eu...
WP_011287783 130 HpslPLVKYFFFPGFSGAGGGLLREKNLLDERD---------RSLLQNGG-----------SSEFEISLFCYDTAPIGGL 189 Dechloromonas a...
WP_011865714 140 Qr-sGLKKQFYFPGFTEKTGGLICEADLLERRQAWQNN-KERLTYFEALGLs-----G-IDEHDTVISLFSYETESLEAL 211 Shewanella loihica
WP_011479976 126 HpqlGLTKHFFFPGFTPASGGLLRETNLLAERTRFQQSHALQAAFWESLGI------M-P-QHAYTISLFCYPHAPLDSL 197 Methylobacillus...
WP_011496430 139 Qt-nGLLKYFYFPGFSDKSGGLICEQGLFSERDAWQADTCNKVNLFTQLGLk-----G-IDPADTVISIFSYETPALAAL 211 Shewanella deni...
WP_012418173 124 QradGLVKHFFFPGFTPATGGLIREPSLSQERDALQASRPAQDAFLRRLGVt-----R-RDADSRTLTLFCYPQAPYLEL 197 Bordetella avium
KDD15307     126 QradGLVKHFFFPGFSAATGGLIREPGLSRDRDALQTSRAQQRTLLRALGLdeaalaR-RDDGARLVNLFCYPDAPYQAL 204 Bordetella bron...
WP_011902259 128 Qs-hGIPKYFFFPGFQDDVGGLLLDPIPPIGSLVENQIPKDLQALWSTL-----------RPNAKRISIFCYPGAPLRKW 195 Polynucleobacte...
WP_011072321 214 CELWqarAKNDAKIHALLPKGRSLNSLQHLL--PcpVDALMPGQQIKLGDLTLHILPMTDQQGFDRLLWSCDVNIVRGED 291 Shewanella onei...
WP_011111509 208 LEAW---AGSISPVRCLLPEGTASASAASWA--G--ISRLAAGDSIQRGNLTLHVIPFMSQENYDHLLWACDCNFVRGED 280 Nitrosomonas eu...
WP_011634372 214 LEAW---VISTSPVRCLLPEGVASRQAAAWA--G--QSRLVAGDSVQRGNLVLQVLPFVPQENYDRLLWVCDCNFVRGED 286 Nitrosomonas eu...
WP_011287783 190 IDAL---AKMSKPVTCHVPPGKPLAAVSTYL--G--GA-----GPWQCGNALIRPIPFMPMDDYDRLLWRCDVNFVRGED 257 Dechloromonas a...
WP_011865714 212 CRHW---QDGERQVHLLVPIGRSLNSLGAFId-Q--QQALTPGSRFHHGKLTIHLLPMTDQQGYDRLLWSCDFNIVRGED 285 Shewanella loihica
WP_011479976 198 LDAM---MQVGQPVLCIIPNGPIAEHAMAWL-----------RSRKGQHKLRVATVPFLSQERYDHLLWACDLNFVRGED 263 Methylobacillus...
WP_011496430 212 CKLW---QQSKDKVHALIPKGRSLNSLTALLncD--ASDIMPGQQFHLGNLTIHILPMTDQQGYDRLLWSADFNIVRGED 286 Shewanella deni...
WP_012418173 198 AQAL-----SRQTTLLIVPEGVA------------------PGLASTPG-LQIARIPFVAQPDFDRLLWCADLNFVRGED 253 Bordetella avium
KDD15307     205 AHAL---MQDARPTLLLVPQGVAPG----------------LPEPGQHGQLTLARVPYVSQPDFDRLLWCADLNCVRGED 265 Bordetella bron...
WP_011902259 196 LSDL---AALGENVDILLAHGHAE---------Q--LNLYGEQPIELPNNLKLFSMPFVSQDEYDWVLSQCDFNIVRGED 261 Polynucleobacte...
WP_011072321 292 SFLRAQWAAKPFIWHIYPQEDDYHLIKLEAFIRLYCDNLAPDIADTWSKLNFAFSQGQQsaVK--THWQNL-----NP-- 362 Shewanella onei...
WP_011111509 281 SFVRAQWAVRPIVWQIYPQQENVHLIKLEAFLDLYCQELIEPAADAVRAFHRSWNNNEQ------PDWNCF-----WK-- 347 Nitrosomonas eu...
WP_011634372 287 SFVRAQWAARPVIWQIYPQQEDAHLPKLEAFLNLYCQGLVQEAADVLRALHQGWNNNKQ--L----DWDNF-----RR-- 353 Nitrosomonas eu...
WP_011287783 258 SFVRAQWAGKPFVWQIYFQDEDAHLIKLEAFLERYCAGMNKTLEAVVREMFLAWNTGSN--VE--LAWLNF-----MA-- 326 Dechloromonas a...
WP_011865714 286 SFLRAQWAAKPFIWHIYPQEEDYHLIKLEAFMALYCHNLAPEIADAWKKLNIGFNQGEQesLL--SLWQQV-----DN-- 356 Shewanella loihica
WP_011479976 264 SWIRALWAGKPLIWQPYLQEGDAHLAKLEAFLQHYCQDSPPDLSIHIMAAHRAWNRNGF--TP--SAWQAL-----LA-- 332 Methylobacillus...
WP_011496430 287 SFLRAQWAAKPFIWHIYPQEDDYHLVKLRAFLEIYCDNLAPELANHWSELNIAFNTGES--NSvlSHWEQL-----NS-- 357 Shewanella deni...
WP_012418173 254 SFVRAAWAARPLVWQIYPQEENAHLEKLNAWLARYPAP------PAARALFSLWNQ-ET--GS--ARWPDT-----LHaa 317 Bordetella avium
KDD15307     266 SFVRAAWAARPLLWQIYAQAENAHLEKLQAWLARYPAP------AAAHALMRAWNQAPG--AP--APQQALagalaEP-- 333 Bordetella bron...
WP_011902259 262 SFIRAQLAGKPFIWHIYPQEDRAHEVKLAAFLDLYLSDASQDLKLATIA-AMTW----A--MP--SDWFN---------- 322 Polynucleobacte...
WP_011072321 363 ----V----SLPLLQHAKEWPIDAI---NAADLATRLVQFVK 393 Shewanella oneidensis
WP_011111509 348 ----Y----RDVLQQHAMAWAERLA---QIPNLASSLVNFCR 378 Nitrosomonas europaea
WP_011634372 354 ----Y----HKALQQHAIAWAEQLA---QAPDLASNLVNFCR 384 Nitrosomonas eutropha
WP_011287783 327 ----N----YADIARYSKHWAETQA---SQPDLASALVKFCA 357 Dechloromonas aromatica
WP_011865714 357 ----A----HLALTQHAQDWPNEAL---NDADLATRLVQFVK 387 Shewanella loihica
WP_011479976 333 ----A----LPGWHKQSQAYARKQA---EESDLAAKLVIYCR 363 Methylobacillus flagellatus
WP_011496430 358 ----VdlslLQDGQHHLQQWPVDAL---NDADLATRLINFVN 392 Shewanella denitrificans
WP_012418173 318 legrA----WEQWKQAARDWDAGFA---ARPDLGDALVDFCA 352 Bordetella avium
KDD15307     334 ----A----WGEWNQAARAWDAAQA---ARPDLGDALADFCA 364 Bordetella bronchiseptica MBORD707
WP_011902259 323 ----S----LQIWNKHAQAWRTHLLekqGDGGLAARLVRFIA 356 Polynucleobacter necessarius
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