Conserved Protein Domain Family
TIGR03809

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TIGR03809: TIGR03809 
TIGR03809 family protein
This protein family contains proteins with a median length of about 175, including a strongly conserved N-terminal region of about 55 amino acids, a conserved extreme C-terminal region of about 15 amino acids, and highly variable sequence in between the two. Members are found invariably with a member of family TIGR03808.
Statistics
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PSSM-Id: 163521
View PSSM: TIGR03809
Aligned: 9 rows
Threshold Bit Score: 160.39
Threshold Setting Gi: 499398362
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011085829  34 SREIAARWCVLAEQRLQHLSEMFETGRWRRYHSEIAFLENIQEAKRAVQTWRAIATggdvaAAAA--------SVTPAFG 105 Bradyrhizobium ...
WP_011442425  10 GRAIIERWCVLAEQRLEYLTEMFESGRWRRFFSETAFLENIQEAKAAVETWRDLLY-----REAT--------IDNQPID 76  Rhodopseudomona...
WP_011502336   9 GRAIVERWCVLAEQRLEYLTELFETGRWRRFFSEVAFLENIQEAKAAVETWRDLLD-----REAS--------VGNQPAD 75  Rhodopseudomona...
WP_011511096  62 AQDILDRWRGIAEQRLDHLIEMYESGRWRRYHSEHAFMENLREAKTAVETWRVLAR-----RETT--------PDDPAID 128 Nitrobacter ham...
WP_011157327   9 GRALVQRWCLLAEQRLDYLTELFETGRWRRFFGELEFLENVQEAKAAVESWRGLLQ-----REAT--------LDNRPVD 75  Rhodopseudomona...
WP_011472210  10 GRAVVERWCILAEQRLEYLTELFETGRWRRYHSELDFLDNIQEAKLAVQTWRGLLT-----REAT--------ANNQPVD 76  Rhodopseudomona...
WP_011315466  14 AQDILNRWCVLAEQRLDFLIELYESGRWRRYHSENAFMDNLREAKAVVETWRALAQ-----REAT--------PDNRAFD 80  Nitrobacter win...
WP_011663275  10 GRTVVERWCVLAEQRLDYLTELYESGRWRRFHTELDFLHNIKEAKQAVTTWRGLLD-----TEAA--------PDNRPIS 76  Rhodopseudomona...
WP_011925697   4 SRELAARWRALAERRLDHLTELFDSGRWRRYYTEQSFLDDLRHAKAAVETWTSLAA-----AKVElakvdpikVDPVMVD 78  Bradyrhizobium ...
WP_011085829 106 WSPATMPRMAPreqqaqtmqPKAVHIAPETA----VPV---------------RLAPTPNVLaevteaplvplapsapla 166 Bradyrhizobium ...
WP_011442425  77 LSWLGHNKNLP---------PRQIFYLSDETaadsART---------------LQFAPTSVV------------------ 114 Rhodopseudomona...
WP_011502336  76 LSWLGRNKNLP---------PRPIFYLSDETaadfAET---------------RRFASPPAA------------------ 113 Rhodopseudomona...
WP_011511096 129 WSWLDQPAEAS---------PATQEMQDEAG----QSP---------------ARMLGTAAV------------------ 162 Nitrobacter ham...
WP_011157327  76 LSWLGHNKKVP---------PRLAFYFDGEV----V------------------NGSPSYAL------------------ 106 Rhodopseudomona...
WP_011472210  77 LSWLGVNSKLK---------PRQ------------------------------------SVL------------------ 93  Rhodopseudomona...
WP_011315466  81 WSRLDRPSQTP---------AVSQHGAGQSS----A----------------------GAAI------------------ 107 Nitrobacter win...
WP_011663275  77 MAWLASNRPLA---------PRRPTLFADE-------------------------------L------------------ 98  Rhodopseudomona...
WP_011925697  79 PVKLEPIKIVPasvvsaktaVAAPIMVAAPP----VEPerlpepirlyalderSFEHRPIEL------------------ 136 Bradyrhizobium ...
WP_011085829 167 apaaVASFTAPAA------VPPLKAPAARALPTVPVVRT-PSaapaalaprtappvrspfaepaaiasvaapavkapaav 239 Bradyrhizobium ...
WP_011442425 115 ----PALEQASVA------ADYELAGLPRLSIVPSFESD-DI-------------------------------------- 145 Rhodopseudomona...
WP_011502336 114 ----PASACASIE------IDEEPSP-PRLSIVASVEPD-FA-------------------------------------- 143 Rhodopseudomona...
WP_011511096 163 ----HAALTSIVS------SPEDTLVE--ANDDAPADGE-TA-------------------------------------- 191 Nitrobacter ham...
WP_011157327 107 ----PHSAPRPAQ------SPRVAT------PATPAEPErAP-------------------------------------- 132 Rhodopseudomona...
WP_011472210  94 ----PSEAPATWT------APRHPAAVQYTAPVAPVERT-EP-------------------------------------- 124 Rhodopseudomona...
WP_011315466 108 ----PYAPRVVVG------L--QEGATPRAKDEVPAGKN--A-------------------------------------- 135 Nitrobacter win...
WP_011663275  99 ----PQAMPRTIE------LPPEEAPPVAPAD------R-LA-------------------------------------- 123 Rhodopseudomona...
WP_011925697 137 ----PRSLDTILArseiivEPEIALAEPDMEPDVVIEPN-DV-------------------------------------- 173 Bradyrhizobium ...
WP_011085829 240 atllqqfSPPADE----IVAAPERVVEFT-----------------------------LSLDGIEAKYPLLRNA 280 Bradyrhizobium diazoe...
WP_011442425 146 -------LEADIF----EPVERDERPAWQh---------------------------aLDLGQLAQRYPLLRKA 181 Rhodopseudomonas palu...
WP_011502336 144 -------IDPDVV----ELTQPDEPPAWQh---------------------------aLDLGQLAERYPLLRKA 179 Rhodopseudomonas palu...
WP_011511096 192 -------SGAGLA----TGIVP-------------------------------------DPHPFQERYPMLKCN 217 Nitrobacter hamburgensis
WP_011157327 133 -------IAPEPA----PAIVPDDVPVWMh---------------------------aLDPARLEQRYSLLRKA 168 Rhodopseudomonas palu...
WP_011472210 125 -------VAAAAD----EDAAEPV--SWEr---------------------------qLDLVVMQQRYPLLRPA 158 Rhodopseudomonas palu...
WP_011315466 136 -------RDADRP----TGILP-------------------------------------DLKTLQMRYPILRYA 161 Nitrobacter winogradskyi
WP_011663275 124 -------ADATVS----PQLEP---QGWQp----------------------------LDFSKMQQRYPLLRPS 155 Rhodopseudomonas palu...
WP_011925697 174 -------VETDYAfeydEVAEHDVAPELTdaplhidmsaleqalsigiegdveydepvVDLDAIERRYPALAVA 240 Bradyrhizobium sp. OR...
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