Conserved Protein Domain Family
NHLM_micro_ABC2

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TIGR03797: NHLM_micro_ABC2 
NHLM bacteriocin system ABC transporter, ATP-binding protein
Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal leader sequence cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, members of protein families related to nitrile hydratase alpha subunit or to nif11 have undergone paralogous family expansions, with members possessing a putative bacteriocin cleavage region ending with a classic Gly-Gly motif. Those sets of putative bacteriocins, members of this protein family and its partners TIGR03794 and TIGR03796, and cyclodehydratase/docking scaffold fusion proteins of thiazole/oxazole biosynthesis frequently show correlated species distribution and co-clustering within many of those genomes. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Biosynthesis of natural products]
Statistics
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PSSM-Id: 274789
Aligned: 17 rows
Threshold Bit Score: 880.445
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EDM96919     215 GDALFDACAAAGSVAGLELRCPGRH--FFsgDDSPEEr-I-RRICDYNQIRCRKVELEQGWELQDFTAFVTFRRESGEPV 290  Victivallis va...
EEG50096     163 GNRMYDAAAFVCDFMGVYIAPFEKV--KEs-CRKKFS--L-WDIGRLSHFTSREIVLEENWYKKDSGPMIAYTAKGRLPV 236  Blautia hydrog...
WP_012411344 279 GPPLLVAMGAIGRTLGIEIRPAADN--FNs---IKDP--V-AAIAQSSQIRIRRVTLASGWWRQDQGPMLAYTQLEKRPV 350  Nostoc punctif...
WP_012033524 204 GDPLFAACSLVGRAMNIEIVPSPRA--AQd-MPAKDP--L-RDIARASRIRIRQVALKGEWHTQDNGPLLAFTADDNRPV 277  Pelotomaculum ...
WP_015942580 234 GDPLLDACRLVGRTMQIGIVAPP----EVl-GSSKVM--LlDEIARASRIRVREVSLHGNWYTQDSGPLLGYMKEDHRPI 306  Desulfitobacte...
WP_012628441 262 GDPLLMAAGAVGQAMGLSIKPPLPS--Q---QGMIDP--I-AAIAQASQIRVRQVRLEGTWWQSESSPLLGFT-LEGLPV 332  Cyanothece sp....
WP_011632230 262 DLPLAVALKAVAEDMGVALPPEFGRvvEKi-TGFDEEgiL-KALAAYCGLSIRRIRLRPDWWRHPGENMIGY-FQDGQPV 338  Granulibacter ...
WP_010988887 254 adatyaaCKLVAGAAGIALAEPAQS--GTe-SDRLDP--V-ERVAIASRVRTRAVRLDGRWWRDNTGPLVGHRALSGAPV 327  Streptomyces a...
WP_012171731 272 DQPLVLALAHLGSVAGFEVRLPARR--DH--EPRPFE--L-DALARASRLRLRHVRLEAGWWRHDSGAFLLMRAAPLPPL 344  Azorhizobium c...
WP_018263009 308 EDPLMAACALVAGTMAAPLTRPAGR--VRt-ARDYRD--V-VEIARASRLRVRRVLLRAEWWRQDAGPLLAWRGEAGAPV 381  Methylobacteri...
EDM96919     291 ALLGRSGDEPRLF-DPARERPRRISRQEAAALAPEGWCFYAPF--PPGRITPGRLLAMAFRGA-RGDLSALLWLMLLGAL 366  Victivallis va...
EEG50096     237 ACVPAGPGAYTAH-DVTTGKNYRVDQKFADSLEPKADMIYRPY--PNKKIGWKELLTFGLKSAyVRDFVNIGIMALIGTL 313  Blautia hydrog...
WP_012411344 351 ALLPTDKRDYVIF-DPVTRTRIPVNEAVAKTLTTSAYVLYRPL--PQVALKAIDLLRFGVKGY-EKDIASILVVGLLGTI 426  Nostoc punctif...
WP_012033524 278 ALIPLSPCRYQLH-DPADNTTQPVDRQTARRLKPFAVAFYRPF--PNKVLKLRDVLIFGSENCwKRDLLTVILMGVAGGL 354  Pelotomaculum ...
WP_015942580 307 ALIPATPASYCIH-DYTLGITRSVDSETAQEIDAFGFVFYRPL--AERKITARDLLALGWGNSwRRDFLMILLMGVLGGI 383  Desulfitobacte...
WP_012628441 333 ALLPVVNKRFHLY-NPATEDRPLIDATIAGGLSRDAYLFYRPL--LGVVKSPLQLFQFALRGH-EWDLVWVLVVGVLGTL 408  Cyanothece sp....
WP_011632230 339 ALIAGRKKWTSVHaDQEQKKWQTVTAEMAATVLSYGYVVYRPFglKDKKP-LYAIIRFVLSLA-RRELILVGIISLLVSL 416  Granulibacter ...
WP_010988887 328 ALLW-RRGGYVAV-QPSSGRETPIEKANAEEFEPRAVMFYRPL--PERGLGPLRLMRFSMRGT-GGDLRNLLASGLVTVA 402  Streptomyces a...
WP_012171731 345 AVVP-ARGGYEIF-DPEERTVRRLPAAEAAALSGDAYMLYPAL--PDRPVSLRQVAARIVSAR-VRDLAALAGATLLAGV 419  Azorhizobium c...
WP_018263009 382 ALLR-ERRAYLMV-DPATGERRRVDAALAAELGPEAAGFYPTL--PGRALSFRDLLAFAARRA-RGNLASVAVPAVLMGL 456  Methylobacteri...
EDM96919     367 LSMAVPIINGVIFGTVIPTADRVLLMQLFGISLLFAVTQGVFEYVESIAILRIHVRAEYTLQAAVWDRLLNLPARFFRAF 446  Victivallis va...
EEG50096     314 IGLLLPMINEQLYDKFIPMADSSGLVQICMVILACTVGNLTFTIVKNLATFRSMNAMEYAVQSATYDRLFNLPESFFREY 393  Blautia hydrog...
WP_012411344 427 LGMVAPQATAILINNAIPDSDRALLWQIGLVMFAVAFGQLAFQIAQSIITLRVESATDSVLQPAIWDRLLRLSPRFFRQY 506  Nostoc punctif...
WP_012033524 355 LSMVIPVATGIILDTIIPGGEKAQLLQMAFFLGASALAGLLFQLTRSLAVLRLEGRMEGAVMAAVWDRLLSLPVSFFKNY 434  Pelotomaculum ...
WP_015942580 384 LGTATPLATGIIFNTIIPEGERGHLVQIAFFLGASALAAMIFQFVRSLAALRIEGKMEGAIQAAIWDRLLSLPVPFFKQF 463  Desulfitobacte...
WP_012628441 409 LGMVIPQATAFLINDAIPDGDRLLLGELGLALFAAAVGQSAFQLSQGILTLRVENTADATLQPAIWDRLLRLNPGFFRLY 488  Cyanothece sp....
WP_011632230 417 MGMASPFLSGMLVQQVIPEGVKSEVLQLVLAMLGVSLGMVSFELVRSLAVLRMETVLSSSMDMALWNHLLRLPASFFQRF 496  Granulibacter ...
WP_010988887 403 VGALVPIATGKVLGEYVPKAQHGLIVQVCLAIMITSVVSAAFMLLQNLTLLRMEGRIEATLQPAVWDRLLRLPTKFFTSR 482  Streptomyces a...
WP_012171731 420 LAMAVPLAISYLVSSVIPDNNAGKIAQVAAALSVLAVMNFVLRLASQLVVLRIEGLEGSRLQAGVMDRMLRLPTGFFRSF 499  Azorhizobium c...
WP_018263009 457 LTLVVPLITQALVNSAIPRSELDQITVCAIALAVTALAAAAVQAAESLAMLRLEGLIDWTLQAAMIDRLLRLRAALFRDH 536  Methylobacteri...
EDM96919     447 STGDLATRSLGIMQIGEILSVSTVKAAVAGFFCFPSLVLMLYYDLLLGVISLLILLAVLGVFAVLAVMMVRRHTRILAEE 526  Victivallis va...
EEG50096     394 ESADLASRAMGITTIFQVMADVMVKTLLSGVFSLLYLWRMFQYSKNLAKVSIVMILAAMLLIGFIGYRQTRYEGKKMEID 473  Blautia hydrog...
WP_012411344 507 TAGDLVNRVMAVREIHQKLSGATQKTLLSGVFALLNLVLMFIYSWQLALVGVGLAIFAAAVTTVASFRLVKKSRKQQELN 586  Nostoc punctif...
WP_012033524 435 SAGELAMRAMGVSQIRRMLSGVVINNVLSSFFSLFNFGLLFYYSVKLAAVSTVFILVVTVIMAVLGYRQVGYERLVVGMS 514  Pelotomaculum ...
WP_015942580 464 PAGELAMRAMGISQIRKILSGVTLNTVLSSIFSVFTLVLMFYYDRRLAAAATMLVAVELLIIGFLGYLQVHYERKILEVS 543  Desulfitobacte...
WP_012628441 489 SSGDLLNRVLAVSQIRKKLSGATQRTLLSGIFALLNLGLMVVYSWQLTLVGMGISLLAILVTVVSGLLLVRKSRIQQELE 568  Cyanothece sp....
WP_011632230 497 GAGDLSMRADAINEIHRTIGISTITILISVIFSVFNLAVLFSYGMAPILLTIVICLVEIGLLLFSAMFNTTMQRQALANR 576  Granulibacter ...
WP_010988887 483 STGELASAAMGISSIRRLLAGVGPTVAQSVTVGAMNLGLLFWYSAPMALAAIGMLVVIAGVFLGLGLWQVRWQRRLVVLS 562  Streptomyces a...
WP_012171731 500 TAGDMGTRVMAVARLEKALTASLVGSVMTGMMAIISYGVMLAYSWRLALVAILLTLLLAAGTLVLGLIRIRYEAQAIRED 579  Azorhizobium c...
WP_018263009 537 TVGDLVDRAMGIDAVRRLLTGRTLRSLLAGMFGLFSIALMLVYDPVLALIAVALALLRGVLILAASGLRLYHESRAFNGQ 616  Methylobacteri...
EDM96919     527 GELNGELVQFFNGISKIRTAGAENAAFARWAGRFSLKKRIYRSFANCRSFATVVNAVIPVVTIGTVIAIVTWqyfhakdA 606  Victivallis va...
EEG50096     474 GKLSSIMYQFLSGIAKIRIAGVENRALYEYLKPYAESRKIYMKKEKMGIVVDSLIAALQVFFSIVLYYIMIR-------K 546  Blautia hydrog...
WP_012411344 587 GAIQGLTVQLINGVAKLRVAMAEERAFAAWAKKYSQQIRLKANWQQIKDGMSVFNEALPLVSSILLFGLAMl------lM 660  Nostoc punctif...
WP_012033524 515 NRLSGLILQFLTGITKFRVAGAEKRAFYLITREFSEQRRMEYKSRMLAVQLSSFQAVLPVITSMAVFYAAVSl------T 588  Pelotomaculum ...
WP_015942580 544 NQIAGMMLQLIGSITKFRVAGAEVRVFYRWAERFSEQRQFVFKKRILGNWLTTFHDVFPILAGMIIFYTLIA-------G 616  Desulfitobacte...
WP_012628441 569 GQINGLTVQLINGVVKLRVAMAEERAFAAWAQQYSQRIRLKALFQRINDAVTVFNDALSLVTSVLLFWFAILfiqmeqaT 648  Cyanothece sp....
WP_011632230 577 GAMQTLTVQIFQGISKLRVAAAENRFLARWMKLFARDQAIHYRVDMVGNGLAAFGVGWNILVMAALIALVGF-------G 649  Granulibacter ...
WP_010988887 563 NKLNNQAFQTLRGLPKLRVAAAENYAYAAWAGEFARSRELQQKVGRIKNLTTVLGAVYLPLCSLLMFMLLAGp------A 636  Streptomyces a...
WP_012171731 580 ARMSGLTLELAAGITKLRLAAAEDRAFYRWARLYAAASRSQLDADRAASLLNTLSEGYPAFAMAVLFAACIYg-----gL 654  Azorhizobium c...
WP_018263009 617 GRVQGFVLQLFAGIGKLRVAGATVRALAVWSRLFTEQKGHFLAAQRIANGLSIAETALPTLATLAIFAAASTl-----gS 691  Methylobacteri...
EDM96919     607 ASLMSSADFVSFVSALGIVSAAVGQMVMSLISAVSAIPVYRRLRPILEAEPENDAAKPPPGKLSGAIDVRNVSFWYGPDQ 686  Victivallis va...
EEG50096     547 NVGLSVGSFMAFMTAFGSFSGAMLQVVSSFLDVNAVVPAYQRCRPILSALPEYEENTVLPGILTGDVEVSNVTFAYDKES 626  Blautia hydrog...
WP_012411344 661 QPHLTLGIFVAFNYALTIFIKGIIDLSNTVSEIWGIVPIWERAKPIWRSQPEDGSTKVNPGQLSGRIALESVSFRYSENG 740  Nostoc punctif...
WP_012033524 589 GSTLGTGKFVAFNSALVSFMGSMTVLCQSFLSVNMIIPLFERSKPILETLPEYDEAKSDAGELTGVIEVSHVSFRYREDG 668  Pelotomaculum ...
WP_015942580 617 HSLLSPGEFIGFNVAFISFMMSMTSLTEALIGAYSVIPLYQRAKPILDTLPEYDETKIAPAPLRGSIAMDHISFRYKVDG 696  Desulfitobacte...
WP_012628441 649 GGGLNVGSFLAFNAAFGIYIKGVTDLSNTLTDILDIVPTWERADPILRSETEIDINKADPGLLRGGVVLEHVTFRYRPDG 728  Cyanothece sp....
WP_011632230 650 AAKMSFGDYVTYSGISGQFVSAVLSLVGIISSIMSVVPLWERSLPILAEPQENAGGRVQPGQLHGDIALDHVTFTY-PNG 728  Granulibacter ...
WP_010988887 637 RGAMSAAAFLTFNTSVTMLLTSVTQLTGAFVSAVAALPMFEEIKPVLDATPEVRTASTRPGVLSGGIEARRLSFRYADDG 716  Streptomyces a...
WP_012171731 655 VDSIGLGLLVGFAIAFSSALEGLRGLAQAAVEVVALAPIVAHAAPILHATPEVDGEKMDPGELSGAIEISRLTFQYQPDA 734  Azorhizobium c...
WP_018263009 692 TLTQNLGAFLGFFAAFGQTMGAIGAFAAGLSEALVAIPHLTRMRPLLAAEAEIADDRKPPGDLSGAIEVSRLTFRYGASG 771  Methylobacteri...
EDM96919     687 RQILSGLSMQVKPGEFVAVVGESGSGKSTLLRLLLGFETPGSGSIAYDGQDVSHVNLQALRSRIGVVLQDSRLLPDTVLR 766  Victivallis va...
EEG50096     627 GPVLKDVSFHIKPGEYIGVVGASGCGKSTLMKILLGFERPQKGKVFYDGKDIDSMDKRELRKKFGVVLQDGNLISGSIYE 706  Blautia hydrog...
WP_012411344 741 NLILNNVSFHAEPGEFVAIIGPSGSGKSTIFRLLLGFETPLTGSVYYDGQDLADLELQAVRRQLGVVLQNGKFGTGSVFD 820  Nostoc punctif...
WP_012033524 669 PLVLDDVSLQAGEGDFVGIVGASGSGKSTLLRILLGFEKPVAGQVFYDGRPLEKLDIGSVRRQLGVVLQNSQLMSGDIYS 748  Pelotomaculum ...
WP_015942580 697 PLVLKDVSCRIEEGDYVALVGTSGCGKSTLLRILLGFEKPETGKIYYDGQDLEKVDIRAIRKQLGVVLQNGQLMSGNIFT 776  Desulfitobacte...
WP_012628441 729 PLILEDVSLQARAGEFIAIVGPSGSGKSTLFRLLLGFETPLSGSIFYDGQDLKGLNVQALRRQLGVVLQNGRIGSGSIFS 808  Cyanothece sp....
WP_011632230 729 MVALRDISLKIKAGTFVAIVGPSGSGKSTLMRLLLGFDQPGSGSVLFDGYDLKDLDTGAVRRQLGVVLQQSRIETGSIYN 808  Granulibacter ...
WP_010988887 717 PLVLDDVSFEIKPGEFVAIVGPSGCGKSTLLRLLIGFDKPVSGSVLYDGQDLGALDQSAVRRQCGVVLQHAQPFTGSILD 796  Streptomyces a...
WP_012171731 735 PRIFDDLSITIRPGEFVAFVGPSGTGKSTLFRLLLGFEQPASGVVLYDGVDLAGLDIQAVRRQCGVVLQGGKLMPGTLMD 814  Azorhizobium c...
WP_018263009 772 PPVLDAVSLRIAAGEYVAIVGPSGSGKSSLLRLLLGFEAPESGAVFYDGKALDTLDVSAVRRQLGVVLQNGRLTTGSLYE 851  Methylobacteri...
EDM96919     767 NIIGHSGkLTVDDAWEAARLAGCEQDIREMPMGMHTMLSAGGGSVSGGQRQRILIARALAKKPAVLLFDEATSALDNETQ 846  Victivallis va...
EEG50096     707 NITITAPhTTMKRVQQVIQEVGLEKDIKDMPMGLHTVLSENSGTISGGQQQRILIARAIVGKPKILFFDEATSALDNVTQ 786  Blautia hydrog...
WP_012411344 821 NITAGAL-VSLEEAWEAAQMAGLADDIKQMPMGMHTIIAEGGTNLSGGQRQRLLIARSLVAKPKIILMDEATSALDNRTQ 899  Nostoc punctif...
WP_012033524 749 NIVGANYhLTMDDAWEAARMAGLDQDIRDMPMGMYTLVSEGGATLSGGQRQRLLIARAIVNRPKIIFFDEATSALDNRTQ 828  Pelotomaculum ...
WP_015942580 777 NIVGANPyLTIDDAWAAVKMVGMEEDIQAMPMGMHTMISEGASTLSGGQRQRLMIARAIVNQPKILFFDEATSALDNRTQ 856  Desulfitobacte...
WP_012628441 809 NITAGAV-VSLDLAWEAARMAGFAEDIEQMPMGMHTVISEGGTNLSGGQRQRLLIARAIVQKPKVILMDEATSALDNRTQ 887  Cyanothece sp....
WP_011632230 809 NIAGAVP-MSHEEAWEAASLAGLADDIDAMPMGLHTYVDDSGQTLSGGQKQRLLLARAIARHPRIMMLDEATSALDNITQ 887  Granulibacter ...
WP_010988887 797 CICGTEP-YTPEEAMAAAEMAGLAEDIKRMPMGLHTIV-QGSGAISGGQRQRLMIAQALIRRPRILFFDEATSALDNETQ 874  Streptomyces a...
WP_012171731 815 NILGSAShLGPDAAWEAARHVALEEDIRRMPMGLHTVITDGGTGLSGGQIQRVLLARAIVSKPRIMMLDEATSALDNRTQ 894  Azorhizobium c...
WP_018263009 852 NICGGVQ-LPLEQAWEAARMAGLEGDIRAMPMGMHTVVAEGVNTLSGGQRQRLLIARAIARRPRILLFDEATSALDNRSQ 930  Methylobacteri...
EDM96919     847 AAVSAGIERLRVSRLLIAHRLSTVMNADRIYVLHEGRMAECGTYRQLME-KDGVFARLARRQL 908  Victivallis vadensis ATCC BAA-548
EEG50096     787 SMVCESLAGLKATRMVIAHRLSTVMDCDRIFVMDQGVIVEQGNYEELMQ-KKGVFYQLASRQM 848  Blautia hydrogenotrophica DSM 1...
WP_012411344 900 AIVTESLAKLNATRVVIAHRLSTIRHADRIYVLDAGNVVQMGNFSKLIA-EEGLFARLVVRQs 961  Nostoc punctiforme
WP_012033524 829 AIVSASLEQLKATRIVIAHRLSTVVNCDQILVMDKGRVVERGTYEELME-RGGFFAELARRQL 890  Pelotomaculum thermopropionicum
WP_015942580 857 AMVSQSLDRLKVTRIVIAHRLSTIINCSKIIVMDQGRIVESGTYDELMS-KGGIFANLVHRQL 918  Desulfitobacterium hafniense
WP_012628441 888 AIVTASLDKLQVTRIVIAHRLSTIRNADRIYVLEAGRVVQVGKFEELIA-REGLFARLVKRQM 949  Cyanothece sp. PCC 7425
WP_011632230 888 AHVMNTLSTLRITRVVIAHRLSTIKEADVILVFADGRLVEQGNYQSLIA-AGGVFAGLAQRQM 949  Granulibacter bethesdensis
WP_010988887 875 RTVIESTKALNATRVVIAHRLSTVMDADRVIVMEDGRVAQQGPPAQLLAdTGGRLHELVRRQL 937  Streptomyces avermitilis
WP_012171731 895 AAVTESFNRIAGTRLVIAHRLSTIARADRIIVLNNGRVEEEGSYDALMA-RNGFFTAFAQRQL 956  Azorhizobium caulinodans
WP_018263009 931 AVVSASLGALNVTRIVIAHRLSTVREADRIVVLAEGRIVQSGTFDDLAA-APGLFADFARRQL 992  Methylobacterium sp. WSM2598
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