Conserved Protein Domain Family
NHLM_micro_ABC1

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TIGR03796: NHLM_micro_ABC1 
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein
This protein describes a multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHLM, Nitrile Hydratase Leader Microcin. [Transport and binding proteins, Amino acids, peptides and amines, Cellular processes, Biosynthesis of natural products]
Statistics
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PSSM-Id: 274788
Aligned: 19 rows
Threshold Bit Score: 1041.45
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
EAU75141       3 RTPTVLQMENTECGAASLSIVLQHYGRYVPLTQLRELCGVSRDGSDAANLILAARSLGLDAKGFKKG-IAALEEVKPPAI 81  Synechococcus s...
EEG50095       7 KTPTIYQMEATECGAASLAMILAYYGKYLPLEQMRIETGVSRDGCNAKNIMRAGKKFGLEVKGYRKS-LDSLLEVEPPCI 85  Blautia hydroge...
EDM96918       9 ECPMVLQMEAAECGAAALAMVMSYYGAVVPLERLRDECGVSRDGSKASSLLKVARNYRFRAQGYREEeLDGLERHALPLI 88  Victivallis vad...
WP_012033525   5 KVPTVLQMEAVECGAASLAMVLAYWGRYVALEELRIACGVSRDGSKASNILKAARKYGLEARGYRRE-PDDLRRMTLPVI 83  Pelotomaculum t...
WP_015942579   8 KVPTVLQMEAVECGAASLAMILAYYGKYITLEELRIACGVSRDGSKASNLLKAARNYGLEAKGYRKE-PEALRRMPLPLV 86  Desulfitobacter...
WP_011357612  18 KTPTVLQMEAVECGAASLGMILAYFGKYVPLEELRVECGVSRDGSKASSLIAAGKRYGLESKGARLD-IDDLHRKPLPMI 96  Pelodictyon lut...
WP_011131509  24 RTPTLLQLENTECGAASLSIILQYYGRYVPLTQLRELCGVSRDGSDAANLLLAAESLGLKAKGFKKG-LLALEQIQPPVI 102 Prochlorococcus...
WP_011027333  29 RTPTVLQMEAVECGAASLAMVLGHYGRHVPLEELRIACGVSRDGSRASNLLKAARSYGFTAKGMQMD-LAALAEVTAPAI 107 Streptomyces co...
WP_012171730  16 RVPSIFQMEAVECGAASLAMVLAHYGRWVPLPELREACGVSRDGSRASNLVRAARAYGLEAQGFRGE-PQHLADMPMPCI 94  Azorhizobium ca...
WP_011632229  27 RVPTILQMEAAECGAASLGMILAYYGLWIPLETLREVCHVSKDGTSAASILRGARRLGLKASGWRVE-PEALAQHRLPAI 105 Granulibacter b...
EAU75141      82 LFWEFNHFLVFEGFRGDR----VALNDPALGPRTVSREEFDRSYTGIVLTLEPGPEFQRGGRAPSPWPIVGRRLSSEPMG 157 Synechococcus s...
EEG50095      86 IHWNFNHFVVFEGHRGKY----YYINDPGMGRRKLSYEELDAAFTGIVLTFEKTENFQKTKKERTFFSFVKERLKGQYLS 161 Blautia hydroge...
EDM96918      89 LFWNFNHFVVYTGRKGRK----YCINDPALGPRLVDAKEMDESFSGVLLEITPGEGFGRFGREPSLAGSLWRRLEGCRGT 164 Victivallis vad...
WP_012033525  84 VHWNFNHFLVLEGFGRGK----VFLNDPGSGPRAVTEEEFDQSFTGIVLAFEPGPDFVKSGGKPGILAALQKRLEGLQGA 159 Pelotomaculum t...
WP_015942579  87 IHWNFSHFLVLEGFHKGK----AVLNDPAAGRRTVSEEEFNLAFTGIVLSFTPTTEFQKDSRKPGLSLALRRRLKGSEQA 162 Desulfitobacter...
WP_011357612  97 LFWNMYHFVVFEGYRKGI----YYINDPASGQRKVSAQEFSESYSGVALTFEKTDAFQPGGRPFSLAGALKKRMPGLERA 172 Pelodictyon lut...
WP_011131509 103 VFWEFNHFLILEGFIGNR----VALNDPALGPRTVSREEFDTSYTGIVLTLEPGPNFQKGGKAPSVWPVVWRRLSLEPKG 178 Prochlorococcus...
WP_011027333 108 LFWEFNHYVVYDGMGRRFgrrgVFINDPGKGRRFVSLEDFDGSFTGVVLTMEPGDGFTRGGRKPGVLGAMPARLRGTAGT 187 Streptomyces co...
WP_012171730  95 VFVNMNHYAVLEGMSGGR----VYLNDPAAGRRVLTLAEFDAQFSGIILTFSPGPDFRKGGEPPSTRRDLAALVDGARGP 170 Azorhizobium ca...
WP_011632229 106 AFWELNHFVVVEGVKKNS----VIINDPAFGRRSIDAESFDAAFTGVLLTFEPTEAFKPGGMRVSLLRALLPRGRRTRAA 181 Granulibacter b...
EAU75141     158 ALFIAIAGLLLILPQLVMPVFAQIYLDEVIGNAMNHWLKPMLWAMALTIGLQVVLQHLQLVGTRSLEKRLTRRFAIGFEH 237 Synechococcus s...
EEG50095     162 ILALVSIGLLLVFPGLIIPVFSQIFIDDILLGGNDKWTTVFLCIMGFTMLFQAALMFYRGILLQRLQNKMSMISAHKFLS 241 Blautia hydroge...
EDM96918     165 FFLLLLTGLLLVPGNLLTPNLSKIFIDNFMMDRFYNWGTPLITLALLTLLVTLFLTWIQCGSLVRLNLKVALAGSAAFLY 244 Victivallis vad...
WP_012033525 160 LSYVILAGLLLVVPGLVIPAFARVFVDDILLGGKGNWLVPLLLGMGLTAALRGILTWIQQYYLVRLETKIALSTTARFFW 239 Pelotomaculum t...
WP_015942579 163 LIYIILLGLALVIPGLIIPVFSRVFVDDILLGGLHSWVWPLLLGMGITAMLRGVLTWMQQYYLLRLETKIALATSGQFLW 242 Desulfitobacter...
WP_011357612 173 LTYIVLASLLLVIPGLVVPSFLRIFIDYVLVQGATDWLRPLLIGMLLTALLQGVLTWLKQYYLLRAETKLALTSSAKFFN 252 Pelodictyon lut...
WP_011131509 179 ALFILLAGLLLILPQLVMPIFAQIYMDEIIGNQIQTWLKPMLWGMALTISLQVVLQHLQLIGTRALERRLTRRFAAQFEH 258 Prochlorococcus...
WP_011027333 188 LPAAVLASLLLVAVGAAVPALSRTYIDMFLIGGQTSLLGVLFASMGACVLLTVVLTWLQQANLLHGRIISSTLSSARFLR 267 Streptomyces co...
WP_012171730 171 FALALFAGLGLILPGLVVPAATQVFVDYYIVEGQADWMLPLLGVLVATAVIQWGLSGLQNTLLVRLQARISILAAGRMIW 250 Azorhizobium ca...
WP_011632229 182 LGFLAIIAVCNLLPPIFLPAAGKIFADNVLVQHATSWLRPLLLALLVSALMSSVLSWLHGMVLTKLQRQMGTESAIQLMG 261 Granulibacter b...
EAU75141     238 QILALPERFYSQRHASDIASRMGINANIAEFIGGQLIPMATGLVLLVFYLILTFLYSPWLGLLILTTTAINALVVQRNLR 317 Synechococcus s...
EEG50095     242 HMFRLPMGFFDQRYAGDLAERVENNNNVSVFLAGDLAETVLNIFVAVFYLVLLLLYSPVLTLIGIVSIGINVVLMKVSSN 321 Blautia hydroge...
EDM96918     245 RVLHLPVSFFASRQSGELATRVQLNDRVAAFLSEQLAANLLSLITLFFYAVVMFCYDAVLGTLAAVMGAAVLLLLQRKLK 324 Victivallis vad...
WP_012033525 240 HVLRLPVEFFTQRYAGDICTRVQSNDRVARLLSGQLATNALNCAMVVFYLILMAWYNLWLALVGAAAAVINILYLRYVSR 319 Pelotomaculum t...
WP_015942579 243 HIFRLPSEFFSQRAAGELTSRIQSNDKVAKLLSGKLATTALNVLMIMFYFTLMLTYSWILALVGLAIAFINVGYLIAVSA 322 Desulfitobacter...
WP_011357612 253 HVFAMPMRFFTMRQAGEISNRVQLNDQVATLVAGDLTANALNFVLIAFYALLMFRYDTVLTLGAILIAGVNAAALFYVSR 332 Pelodictyon lut...
WP_011131509 259 QVLALPERYYAQRYASDIASRVSSNARIAEFIGGELIPMLTGIVLLVFYLVLTLLYSPILGLLVGVTTGINALVVAINLR 338 Prochlorococcus...
WP_011027333 268 HLLRLPVTFFSQRSPADLVQRLQSNDAVAETLARDLAAAGVDAIVVVLYAVLLYTYDPQLTFVGIGVALLNILAMRVVIR 347 Streptomyces co...
WP_012171730 251 RMLRLPVRFFGQRHAGTMAGRIDLARQLGAHAAEQTVKAALAAVTCLFFALVMLIYSPLLAAVTLAMTAGVMGVFVLVQR 330 Azorhizobium ca...
WP_011632229 262 HLLRLPVNFFVQRHTGDIACRVDAAQHLSHSAVVTISSAVFSIMGAITSALIMMLYDVPMALGCFLLSAVDLVALYLVTV 341 Granulibacter b...
EAU75141     318 TQKDANLALQKDAAKSGAVVVGAMRDIETIKAAALEHDVFRRFAGYQSRLLNTLQALQLRNARLRLIPNGLTTFNEVAVL 397 Synechococcus s...
EEG50095     322 AIANSTMKMQQDQGKMIGAVFAGLNITSTLKASGAENEYVSRVLGYYAKTILMEQKLGKLQQILNAVPEVFTEIANVLVL 401 Blautia hydroge...
EDM96918     325 SRKLLGQSIQSDTGMLYGTSATGVMLIETLKASGGENDFFSGWSGFQARSLLGRQKLEASTVLLGTFPNSVQKVTVALVT 404 Victivallis vad...
WP_012033525 320 KRVDQNRKLLQDLGKLSGAAMSGLQIIETLKATGSESDFFAKWSGYQAKALNAEQELGVSTQFLSAVPSFLTALTNAVVL 399 Pelotomaculum t...
WP_015942579 323 RRVDLNRRLLQDEGKLIGSSMAGLQIIETLKATGSEANFFAQWSGYQAKLLNAEQELGVSSQFLSVFPSFLTGINNALVL 402 Desulfitobacter...
WP_011357612 333 KRVVLNQKFQQDSGKLMGTTFYGIKTIESLKASGSEPDFFARWSGLFANMVNGQQQLQVATVFLLALPPFLQSFGNIAIL 412 Pelodictyon lut...
WP_011131509 339 VQQDSSQQLQKDGAKAGAVVVSALQNIDTVKAAAVESDIFRRYAGYQSRLLNTVQKLQLLNARIRVIPSAMTTLNEVAIL 418 Prochlorococcus...
WP_011027333 348 LRATRTAKLRADTARLTNTAYTGLQLIETMKATGGEDGYFRKWAGQHATTLEEQQRLGVPSAWLGVVAPTLATLNSGLIL 427 Streptomyces co...
WP_012171730 331 RLEELARKVNMTAIKVHGRAIQGISMIETLKASGTDDAFFGQWAGYLALLVRERQASGRIEALIGALPDSVMLLNRGLVL 410 Azorhizobium ca...
WP_011632229 342 MRVDGVRRATLQRARYTTVALGGIQSIETIKASGSESDFFAKIAGAQAQLLNMMLSLERLTVYMTLVPQVIKSLSYAGLL 421 Granulibacter b...
EAU75141     398 LLGFLLVIRGDLTLGMLLAAQTIAFSLKGQIESVIGFVQQLPGFEAGVLRLEDVLEQPRDPLLD------Dtsrt----- 466 Synechococcus s...
EEG50095     402 MFGGLLVIKGEMTAGMLVAYTSLLASFIEPVNKLVGFIQRIQTLKADMSRVEDIMRYEQDGKFE------E--------- 466 Blautia hydroge...
EDM96918     405 GLGALRILAGSMTGGAYLVFQLILGYFFAPLEQLVNLGNSLQEIDAGLKRLDDVMTCREDPYAL------E--------- 469 Victivallis vad...
WP_012033525 400 VLGGYLIFNGEMTIGMLVAFQSLMTSFLEPVTGLVGLGSQLQEIEGDMNRIDDVLKYPVEKQAG------Egapa----- 468 Pelotomaculum t...
WP_015942579 403 VIGGFLILDGQMTIGMLVAFQSLMSSFMTPVTGLVGLGAELQEMTGEMNRLDDVLNYPLGRDQG------Dqggrgeqeg 476 Desulfitobacter...
WP_011357612 413 SVGGLRVMEGQLSMGMLIAFQSLLMSFLAPVNEMVTLGQKLQDAEGNMQRLDDVMDN-----DV------Eletd----- 476 Pelodictyon lut...
WP_011131509 419 LVGFFLVIQGQLTLGMLLAAQTIASNLKAEIENVIGFVQSLPDLEAEVLRLEDVLEQPRDPLLI------Dapki----- 487 Prochlorococcus...
WP_011027333 428 WIGGMRAVEGHISVGLLVAFQALVVRFTAPLTRLNGVAGRIQDFAADVARLKDVENFRADPLYD------Rpgdg----- 496 Streptomyces co...
WP_012171730 411 ALSAWLVMEGRMTVGALAAFQTLMSAFSTPLSTLMLELLALRQVRGTLDQLSDVATAPLSWEFEaqqgeaEvqav----- 485 Azorhizobium ca...
WP_011632229 422 GWGAAKVMGGDMTIGTLIAFLSVLQAFHTPVQTLVGAIGGLQELRGDLDRVQDTMRHAPAIVEK------Iegns----- 490 Granulibacter b...
EAU75141     467 -danTAP-------TRLSGKIEIDALRYGFTAIQAPLIDGLSLTIQPGMRVALVGGSGSGKSTLAKLLAGLHQPTGGTIR 538 Synechococcus s...
EEG50095     467 ----AEEkip--mtAKLTGEVELRDVSFGYNILERPLVENFNFHLKSGSSIAFVGSSGCGKSTVSKIVSGLYLPWSGNVF 540 Blautia hydroge...
EDM96918     470 ----AEPrraggpvPKLEGLLELRNVTFGYNPTAEPVLRDFTLTVKPGERVAIVGPSGSGKSTVAKLIAGLYRPWRGEIR 545 Victivallis vad...
WP_012033525 469 -agcGE---------KLEGFVELREVTFGYSPLDPPLIDHFNLKLTPGSRVALVGGSGSGKSTVAKLVAGIYKPWSGEIL 538 Pelotomaculum t...
WP_015942579 477 lggtAEPpa----gQKLSGYVELRNITFGYSILEPPLIEDFSLSLRPGSRVALVGGSGSGKSTIAKIIAGIHHPWSGEIL 552 Desulfitobacter...
WP_011357612 477 -eddDEEh------QPLEGHIELRDITFGYNVLEAPLIENFSLKLEPGQRVALVGGSGSGKSTVSKLVAGLYEPWSGELL 549 Pelodictyon lut...
WP_011131509 488 qdwnSDR-------ERLSGAIEIQDLYFGYMPLNPPLINGLRLSIQHGQKIAFVGGSGSGKSTIAKLLAGLYQPSSGQIL 560 Prochlorococcus...
WP_011027333 497 -----------dstRRLRGHVELQNVSFGYNPLDKPLLSGFDLTVGPGQQVALVGGSGSGKSTVSRLISGLYASWDGVIR 565 Streptomyces co...
WP_012171730 486 -asaTGRv------RKLSGRTQIAGLEFGYNPQGQHVVQGFDLDLPPGARVALVGASGSGKSTIGRLVAGLFDPLGGEIT 558 Azorhizobium ca...
WP_011632229 491 -swlSEH-------GRLSGRITLHGISFSYSA-DRPLISDFNLDMPSGSWVALVGASGSGKSTISRILAGLLSPSDGRVM 561 Granulibacter b...
EAU75141     539 YDGHTLLELPRSVAVASLAMVQQEIQLFGCSVRDNLSLWNRAISDAALLDACRDAEVLDVVRGLPDGLDTQLSEGGRNLS 618 Synechococcus s...
EEG50095     541 MDGMSLKQIPKEILSCSVSTVSQDITLFSGTIRDNLTMWSSSVLEEDMIRAAKDACIHDIITKKPGAYEYELTEGGSNLS 620 Blautia hydroge...
EDM96918     546 FDGEPREYYSHTELFNSFAMVDQDIFLFRGTICDNLTMFDRSIPIAEVERAARDACIHDQIAARSFGYFSEVGESGGNFS 625 Victivallis vad...
WP_012033525 539 FDGIPRESIPRAVINHSLAIVDQEINLFQGTIRDNITLWDNTISESDLLRAARDACIHDEITVRPGGYDHPLAEGGSNFS 618 Pelotomaculum t...
WP_015942579 553 FDGQPRASFTKEVLSNSLAMVDQEICMLQGTVKENITLWDGTISEFGMIRAARDACIHDEITARPGGYEQMVEEGGKNYS 632 Desulfitobacter...
WP_011357612 550 FDGIPRRELPRRRVAASVGMVDQEISLFEGSIAENISMWDGTMPQEEIERAARDAAIDEVISSRTGGYQANLSEGGSNFS 629 Pelodictyon lut...
WP_011131509 561 YDGIPLNEIPRAISVSSLAMVQQDVQLYGCNVRENLNLWNHSLPDKDLRQACADAQILDTVLGLPDGFETVLSEGGRNLS 640 Prochlorococcus...
WP_011027333 566 IDGQRLDDIPRGALASSVSFVDQDVFLFEGSVRDNVALWDPSIPDDAVVEALKDAALYDVVTRRPGGLHSPVEQDGRNFS 645 Streptomyces co...
WP_012171730 559 LDGRPLRSLQRDVLRNSLAVVDQDILLFEGTVRDNITLWDDSMPESRIVRACKDAMIHDDIVARVGGYASRVEEGGRNWS 638 Azorhizobium ca...
WP_011632229 562 FDGVDAADIPRRVIAGSVSFVEQNVVLFEGTVRENIALWDPSLNDEAIVGAAKDACIHDDIGRRKGQYEAVIAEDGANFS 641 Granulibacter b...
EAU75141     619 GGQRQRLELARALVNNPSILIMDEATSALDAETERKLIANLARRGCTQIIVAHRLSTIRDADLILVMEQGQVIQRGTHAQ 698 Synechococcus s...
EEG50095     621 GGQRQRLEIARALVTNPTILIMDEATSALDPLVEKEIVDNIKRRGCTCVIVAHRLSAIRDCDEIIVMDRGKIVQRGTHEE 700 Blautia hydroge...
EDM96918     626 GGERQRLEIARALVSNPSLLLLDEATSALDPETELRIDRNLRRRGCSCVIIAHRLSTIRDADRIVVLDRGETVETGTHEE 705 Victivallis vad...
WP_012033525 619 GGQRQRLEIARALAGNPSILVLDEATSALDPPTEKAIDQGIRRRGCTCLIIAHRLSAVRDCDEIIVLERGRIVERGTHEE 698 Pelotomaculum t...
WP_015942579 633 GGQRQRLEIARALAQNPVILIMDEATSALDPITEKNVDEYIRYRGCTCIIVAHRLSTIRDCDEIIVLEKGKIIERGTHGS 712 Desulfitobacter...
WP_011357612 630 GGQRQRIEIARALATNPSILILDEATSALDPTTEKRIDENIRKRGCTCLIVAHRLSTIRDCDEIIVLEYGKVKERGTHQS 709 Pelodictyon lut...
WP_011131509 641 GGQRQRLDIARALVQNPSILILDEATSALDSETERLVDEAFRRRGCTQIIVAHRLSTIRDADLILVLEHGQVVQQGRHED 720 Prochlorococcus...
WP_011027333 646 GGQRQRLEIARALVRRPSILVLDEVTSALDAETELVVMDNLRRRGCACVVIAHRLSTVRDSDEIVVLDHGTVVERGRHEE 725 Streptomyces co...
WP_012171730 639 GGQRQRLEIARALVAEPSLLILDEATSALDPAVEKALMDNIRRRGCTCLIIAHRLSTIRDCDEIIVMQEGRVMERGRHEE 718 Azorhizobium ca...
WP_011632229 642 GGQRQRFELARALATNPAILILDEATSALDTATELSVLDNLRRRGITILMVSHRLSTIRDCDEIIVLDHGQVVQRGRHEA 721 Granulibacter b...
EAU75141     699 LVQdT-AGAYAQLLS 712 Synechococcus sp. RS9916
EEG50095     701 LKT-Q-EGHYQRLIQ 713 Blautia hydrogenotrophica DSM 10507
EDM96918     706 LLA-K-GGFYARLLA 718 Victivallis vadensis ATCC BAA-548
WP_012033525 699 LKN-L-NGHYAKLIQ 711 Pelotomaculum thermopropionicum
WP_015942579 713 LYE-R-AGTYAKLIA 725 Desulfitobacterium hafniense
WP_011357612 710 LMA-L-GGVYAGLIK 722 Pelodictyon luteolum
WP_011131509 721 MAT-VtNSPYQKLLA 734 Prochlorococcus marinus
WP_011027333 726 LLA-R-GGAYAALVR 738 Streptomyces coelicolor
WP_012171730 719 LMA-S-PGPYRRLVE 731 Azorhizobium caulinodans
WP_011632229 722 LMA-V-DGPYAELIR 734 Granulibacter bethesdensis
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