Conserved Protein Domain Family
TOMM_pelo

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TIGR03793: TOMM_pelo 
NHLP leader peptide domain
This model represents a domain that is conserved among a large number of putative ribosomal natural products (RNP) precursor, including the thiazole/oxazole-modified microcins (TOMMs). As a leader peptide domain, likely to be removed from the mature product, this domain is unusual in several ways. First, it is longer than most previously described RNP leader peptides. Second, most of the domain is homologous to nitrile hydratase alpha subunits. Finally, it appears that this domain correlates with a specific family of cleavage/export proteins while members undergo modifications by different classes of peptide maturase, including cyclodehydratases, lantibiotic synthases, radical SAM peptide maturases. This family is expanded especially in Pelotomaculum thermopropionicum SI. [Cellular processes, Biosynthesis of natural products]
Statistics
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PSSM-Id: 274786
Aligned: 15 rows
Threshold Bit Score: 99.6927
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011317978  15 KRSEFERGLIIKAWEDEAFRQELLTNPKAVYAREsGHEVPDSFDIEIIEETPGSIKL-ILPKNP---ApvtlegELTEES 90  Anabaena variab...
WP_012033509  10 SRKEFEEQIIMKAQSDEDFRKALMDNPKEALGQL-GVRVPDEIEIKVFEESPQVLYL-VLPLNP---D------ELTDEQ 78  Pelotomaculum t...
WP_012033494  10 TRQEIEEQIINKALSDKDFKEILLNNPKEAFGRL-GVQLPAEVEIKVVEESPQVLYL-VLPVNP---Ag------LTDEQ 78  Pelotomaculum t...
WP_012033449   9 TRAELEKKIARKAREDNDFKKALLDNPREALGQL-GVKVPAEVEVRVIEEPPRVVYL-VLPVNP---Ee-----QLDDVQ 78  Pelotomaculum t...
WP_011357619  25 EQQQALGKIIANAWADEGFKQQFIENPAEILRAE-GISVPDGMMVNVMENTPTCMHI-VLPQSP---Di-----DLDGAA 94  Pelodictyon lut...
WP_012033437  10 TRKEFEEQIIKKAQADKEFKQGLINDPKEALGKL-GVRIPEEVEVKVLEESPQVFYL-VLPVNP---D------ELTDSQ 78  Pelotomaculum t...
WP_012409643   9 TRKNIEARIVAKAWKDEGYKQELLTNPKAIIEREfGVEFPAEVSVQVLEENSTSLYF-VLPISPvaiAq-----ELSEEQ 82  Nostoc punctiforme
WP_010996188   7 TRKDVEAQIIVQAWKDEAYRQELLNNPKKIVEQEfGVQLPEGITVHVMEENASNLYF-VIPARPnleDv-----ELSDEQ 80  Nostoc sp. PCC ...
WP_010996185   6 TWKELEEKIIVKAGQDESFKQALVSNPRSTLEKE-GINLPSSIDVNLVETTPGNLSLqALPNSE---Qd-----TLSEAE 76  Nostoc sp. PCC ...
WP_012033471   9 TREELSKEVLEKAGDDKDFKKALMDNPKETLERL-GVRVPEEVEIRVVEESPQVMYL-VLPVNL---D------ELTDEQ 77  Pelotomaculum t...
WP_011317978  91 LEAIAGG 97  Anabaena variabilis
WP_012033509  79 LEVVAGG 85  Pelotomaculum thermopropionicum
WP_012033494  79 LEGVAGG 85  Pelotomaculum thermopropionicum
WP_012033449  79 LNSVAGG 85  Pelotomaculum thermopropionicum
WP_011357619  95 LDALAGG 101 Pelodictyon luteolum
WP_012033437  79 LDAVAGG 85  Pelotomaculum thermopropionicum
WP_012409643  83 LEAIAGG 89  Nostoc punctiforme
WP_010996188  81 LEAVAGG 87  Nostoc sp. PCC 7120
WP_010996185  77 LESVAGG 83  Nostoc sp. PCC 7120
WP_012033471  78 LDNVAAG 84  Pelotomaculum thermopropionicum
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