Conserved Protein Domain Family
Bac_Flav_CT_J

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TIGR03782: Bac_Flav_CT_J 
Bacteroides conjugative transposon TraJ protein
Members of this protein family are designated TraM and are found in a proposed transfer region of a class of conjugative transposon found in the Bacteroides lineage. This family is related conjugation system proteins in the Proteobacteria, including TrbL of Agrobacterium Ti plasmids and VirB6. [Cellular processes, DNA transformation]
Statistics
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PSSM-Id: 274780
Aligned: 10 rows
Threshold Bit Score: 472.282
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_005874544   2 DFANLHELLRSTYEEMMPLCSEMTGIAKGIAGLGALFYIALRVWSSLSRAEPIDVFPLLRPFALGFCIMFFPTIVLGTMN 81  Porphyromonas g...
WP_005861668   2 EFDNLHQILRSLYEQMMPLCGDMAGVAKGIAGLGALFYVAYRVWQSLARAEPIDVFPMLRPFAIGLCIMFFPTVVLGTIN 81  Bacteroidales
WP_004329658   9 DFDNLHQVLRVLYDEMMPLCSNMTGVAKGIAGLGALFYVAAKVWQSLARAEPIDVYPLLRPFALGLCIMFFPTFVLGTIN 88  Alistipes putre...
WP_011108207   6 TFGNLHEVLRNLYDEMMPLCSDITGVATGVAALGALFYVASRAWQALSRAEPIDIYPLFRPFCLGVCIMFFPTFVLGTIN 85  Bacteroides the...
WP_016278412   7 DWTNLHELLRSLYDEMMPLCEDMASVAKGVAGIGALFYVAYRVWQSLSRAEEIDVFPLFRPFVLGLCIMFFPTMVLGTIN 86  Bacteroides
WP_011107101   6 EFDNLHQILRSLYTDMMPLCGNMAGVAKGIAGLGALFYVAAKVWQSLASAEPIDVYPLLRPFVIGFCIMFFPTFVLGTIN 85  Bacteroides
WP_008463829   2 EFNNLHEVLRSLYDDMMPLAGDMAAVAKGLAGLGALFYVALHVWQALARAEPIDVYPMLRPFALGLCIMFFPSIVLGSIN 81  Flavobacterium
WP_004323338   7 DFASLHTILESLYNEMMPLCEDMLGVAKGVAGLGALFYVALRVWQSMARAEPVDVYPLLRPFALGICILLFPTLVLGTMN 86  Bacteroides
WP_029427344   6 DFTNLHEILQALYQDMMPLCEKLTGVAKGIAGLGALFYVAAKVWQALARAEPIDVYPLLRPFAIGLCILFFPTFVIGTIN 85  Bacteroides cel...
WP_012026326  31 DMSSLHGVLEQLYDEMMPLCSNLIAVGQGIAGFGTIWYIASRVWRHIASAEPIDFYPLFRPFVIGFCIMIFPS-VLALIN 109 Flavobacterium ...
WP_005874544  82 AVLSPVVQGTEKMVHVQQDDLQALQLKRDRLEEEACKRDKSRAYLVDDEAWNN----KIEEMGFiGPEDAITLAGM---- 153 Porphyromonas g...
WP_005861668  82 SILSPVVQGTAKMLEAETLDMNRYREQKDKLEYEAMVRNPETAYLVSNEEFDK----QLEELGW-SPSDMVTMAGM---- 152 Bacteroidales
WP_004329658  89 TVLSPVVKGCNQLMETQTFDMNEYRAQKDRLEYEALMRSPETAYLASDEEFDR----QLEELGW-SPSDMVTMTGM---- 159 Alistipes putre...
WP_011108207  86 GIMSPVVTGCHSIMEGQTLNIREYSEKRQKLEYEAMTRNPETAYLVDNEEYER----QIEDLGW-SPSDLKAMAGM---- 156 Bacteroides the...
WP_016278412  87 GILSPVCSATSSLVEQQTFDMRKYQEEKDELEREAMLRDPAKAFLVSDEEFDK----KIDELGW-SLGDMDTMINM---- 157 Bacteroides
WP_011107101  86 SVMSPVVKGCNNMLETQTFDMNAYREQKDKLEYEAMVRNPETAYLVSDEAFDK----QIDELGW-SAKDIATMGGM---- 156 Bacteroides
WP_008463829  82 AVLSPIVSGTHGILQGQVLDLNRLQQQKDQLEYEAMVRNPETSYMASDEEFEK----KLDELGW-SPSDIGTMAGM---- 152 Flavobacterium
WP_004323338  87 SILSPIVQGTHRMLEGQTLDMQQYRAQKDRLEREAMMRNPETAYLVSDEEFDR----QLDELGW-SPGDAATRLGM---- 157 Bacteroides
WP_029427344  86 TVLSPVVKGCHGMLESQTFDMNRYREQKETLEREAFRRDPEKAYLASKEDFDK----KLDELGW-SPKDLKTMAVM---- 156 Bacteroides cel...
WP_012026326 110 GVMKPTVTATAAMVTGSNNAVAVLLKEKEKAIKET---DPWKMYVGTAGTGDRdrwyKYTHDGA-DPSDESMLAGIgndv 185 Flavobacterium ...
WP_005874544 154 --YAERTAFNAKRWFIKKVYQLLELLFHAVSLVIDTLRTFFLIVLSILGPIVFGIAVWDALSGSLTAWFSRYISVYLWLP 231 Porphyromonas g...
WP_005861668 153 --YIDRGMYNMKKSIRDFFREILELLFQAAALVIDTVRTFFLVVLAILGPIAFAISVWDGFQSTLTQWICRYIQVYLWLP 230 Bacteroidales
WP_004329658 160 --YMDRAAYNIKKSVRDWFRELLEMLFQAAGLIIDTLRTFFLIVLSILGPLAFAISVYDGFQSTLTQWISRYISIYLWLP 237 Alistipes putre...
WP_011108207 157 --AAERLKYQARQSVSNFFRSFLELLFQSVSLVLDTLRTFFLIVLSILGPLSFAISVYDGFHNTMIQWICQYISIYLWLP 234 Bacteroides the...
WP_016278412 158 --YGQKAVYDMGEKVRQWFRELLELFFQAASLLIDTLRTFFLIVLSILGPISFALAVYDGFQSTLTTWLSRYICIYLWLP 235 Bacteroides
WP_011107101 157 --YMDRAAHNIKQSVRDWFRELLELLFQSAALVIDTIRTFFLIVLAILGPIAFAISVYDGFQATLTQWITRYISVYLWLP 234 Bacteroides
WP_008463829 153 --YMDRQAYQMEKMIKQWFRNFLEVLFQAAALVIDTIRTFFLIVLSILGPIAFAISVWDGFQSTLTQWITRYVSVYLWLP 230 Flavobacterium
WP_004323338 158 --YMEVGMYNLEKSIRDAFRSLLELLFAAASLLIDTVRTFFLVVLSVLGPIAFSISVWDGLQSTLGQWFTRYISVYLWLP 235 Bacteroides
WP_029427344 157 --YIDRTEYNMKRSIRLWFQELLELLFQSAALVIDTIRTFFLIALSILGPIAFALSVYDGFQSTLTQWITRYISIYMWLP 234 Bacteroides cel...
WP_012026326 186 kfAMEKASYSFRNSVKEWLSEVLRVLFEAAALCIDTLRTFQLVVLSILGPLVFGIAVFDGFQHTLTVWLARYINIYLWLP 265 Flavobacterium ...
WP_005874544 232 VSSILTALLTKIQILMLNKEIAQLQ-DVNYMPDSGNWYYIVFFLIGILGFFSVPTVSGWIIEAGGGiGNYGKNVNeqakr 310 Porphyromonas g...
WP_005861668 231 VSDMFSTILAKIQVLMLQSDIERMQtDPNFSLDSSDGVYIVFLCIGIIGYFTIPTVAGWIIQAGGM-GGYGRNVN----- 304 Bacteroidales
WP_004329658 238 VSDLFSSVLARIQTLMLQKDIQELS-DPNFIPDGSSTVYVIFMIIGIVGYFTIPTVASWIVSAGGT-SAYNRNVA----- 310 Alistipes putre...
WP_011108207 235 ISDLFSSVLARIQVLMIEKDIAALS-DPAYVPDVNNSAYIIFMLIAIVGYFTIPTVSTWVIQASGA-GNYGKQVN----- 307 Bacteroides the...
WP_016278412 236 VGDLFGAILSRIQILMLQQDIKQMQ-DPTFIPDASNSVYCIFMIIGIIGYFCVPTVSSWIIQAGGA-GAYGQKVG----- 308 Bacteroides
WP_011107101 235 VSDLFSSILARIQVLMLQKDIQELS-DPNFVPDSSNSVYIIFMIIGIIGYFTIPTVSNWIIQAGGM-GNMSRNIN----- 307 Bacteroides
WP_008463829 231 VADLFSSMLARIQSLIIERDIEMLS-DPAFIPDTSNTVYVIFMIIGIVGYFTVPTVTGWIIQAGGG-GNFMRNVS----- 303 Flavobacterium
WP_004323338 236 VSDLFSCMLAKIQVLMLQNDIAELQgNPDYSLDNSNCVYIIFMLIGIVGYFTVPTVSGWIVQAGGG-GNYSRNLN----- 309 Bacteroides
WP_029427344 235 VSDLFSSVLARIQVLMLTRDIEAMS-DPTFIPDSSNTVYIIFLIIGIFGYFTIPTVANWIIMAGGV-SHANRAMN----- 307 Bacteroides cel...
WP_012026326 266 VANIFGSIIGKIQELMLKLDLSQVQaTGDTFFSRTDMSYLIFMIIGIIGYFTVPSVANYIVHAGGG-GALGHKVTsmfgn 344 Flavobacterium ...
WP_005874544 311 agGKALTGGKALSAAGGAVVGN 332 Porphyromonas gingivalis
WP_005861668 305 --QMAGRAGGMAGSVAGAATGN 324 Bacteroidales
WP_004329658 311 ------RAGSIAGAVTGAATGK 326 Alistipes putredinis
WP_011108207 308 --SWSLKGGRAAAAITGASIGH 327 Bacteroides thetaiotaomicron
WP_016278412 309 --GAGKMAGNGAAAVSGAVGGS 328 Bacteroides
WP_011107101 308 --SAANKTgsgvgavagaatgn 327 Bacteroides
WP_008463829 304 --QTAMKagniagagagsaagn 323 Flavobacterium
WP_004323338 310 --RTATKaggftagaggaalgn 329 Bacteroides
WP_029427344 308 --QTATKvgnvaaagagaavgn 327 Bacteroides cellulosilyticus
WP_012026326 345 saSSVMRTSSNAVGMAADAMGD 366 Flavobacterium johnsoniae
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