Conserved Protein Domain Family
conj_PilL

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TIGR03748: conj_PilL 
conjugative transfer region protein, TIGR03748 family
This model describes the conserved N-terminal region of a variable length protein family associated with laterally transfered regions flanked by markers of conjugative plasmid integration and/or transposition. Most members of the family have the lipoprotein signal peptide motif. A member of the family from a pathogenicity island in Salmonella enterica serovar Dublin strain was designated PilL for nomenclature consistency with a neighboring gene for the pilin structural protein PilS. However, the species distribution of this protein family tracks much better with markers of conjugal transfer than with markers of PilS-like pilin structure. [Mobile and extrachromosomal element functions, Plasmid functions]
Statistics
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PSSM-Id: 163460
View PSSM: TIGR03748
Aligned: 19 rows
Threshold Bit Score: 139.326
Threshold Setting Gi: 499249197
Created: 9-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011271838  66 LREGRYTLINFSPEEGQKYLLDQSVTVNMLgkkkR----ALTATVEQGLRTTLKDTGLSLCHGFGQNEptlSTLYSRPLP 141 Haemophilus inf...
WP_001095933  52 TRSGRYTLVSIKSADAQREPLNQLIDITMP----G----QLVNSVGDGFRYLLFQSGYSLCGHYGADF---SELLNRPLP 120 Salmonella ente...
KFX11943      53 VRYDRYTLVSTRPADSQRDPLNQMIDITMP----P----QLVRSVGDGFRYLLLESGYSLCPSSSSMF---SELLGRPLP 121 Pectobacterium ...
WP_012105813  56 VRYDRYTLISSKPVDAQRDPLNQIMDISMP----A----EMVRSVGDGFRYVLLESGYSLCPISSPVF---AELLNKPLP 124 Yersinia pseudo...
WP_011145407  55 TRYDRYTLVSVGSQAVQREPLNQIINITMP----V----PLVQRIGDGLHYLLFGTGYSLCDTTATHF---VKLIGRPLP 123 Photorhabdus lu...
WP_015463246  24 VRQGRYTLVEIAPIEGQRDLLMQTIDITLP----T----SDHATVQDGLQYLLRQSGYRLCPADADS----AVLYALPLP 91  Xanthomonas axo...
WP_014861282  39 VRQDRYTLVTTRPTLEQRQPLYQLVNVQIA----P----ALHATVGEALRHLLQRSGYALCADSAAV----DRLFRRPLP 106 Pseudomonas putida
WP_011609889  78 VRQGRYTLVNTSPEEGQKYLLEQMVTVNML----PkkksSNVVTVEQGLVRTLSGTGLRLCAGSHFNQt--ASLFSLPLP 151 Histophilus somni
WP_011783540  33 IQTGRYSYVKNIPPADQLNPLKVVVRTNIP---------QSVNSVGQTVEFLLARSGYVLADAAVLSEe-aKALLNLPLP 102 Marinobacter hy...
WP_011330410  43 TQIDRYSVIAVRPTAGQRDLLSVTRAITIP---------DDIESVGEAFHWMLRDSGYRLATDTVLSEe-sAAMLELPLP 112 Nitrosococcus o...
WP_011271838 142 KVHYQFGPMALRDALQMLAGPAYEITINDVSRTVCF 177 Haemophilus influenzae
WP_001095933 121 AVQRKIGPMRLSEALQVVAGPAWRMSVDEVNREVCF 156 Salmonella enterica
KFX11943     122 GVQRNIGPVRLSEALQIVAGPAWRLRVDDVNREICF 157 Pectobacterium atrosepticum
WP_012105813 125 GVQRSMGPLRLSDALQILAGPAWRLLVDDVNREVCF 160 Yersinia pseudotuberculosis
WP_011145407 124 AIQRKMGPIRLSEALQIVVGPAWRIRVDEVNREVCF 159 Photorhabdus luminescens
WP_015463246  92 AAHVHLGPTTLLTALLAMSGNAWILDVDEAHREVCF 127 Xanthomonas axonopodis
WP_014861282 107 AVQHQFGPISLLDALTIIAGPAWRLEIDPVDRTVCY 142 Pseudomonas putida
WP_011609889 152 KIHHQFGPIKLREALQMLAGPAYYVTLNDITRTVCF 187 Histophilus somni
WP_011783540 103 AIHRKIGPMTLDKALTTLSGEAFELVVDPVHRKVAF 138 Marinobacter hydrocarbonoclasticus
WP_011330410 113 AVHRRFEPMPLQTVMGLMIGPAFHLIQDPVHRLIAF 148 Nitrosococcus oceani
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