Conserved Protein Domain Family
SXT_TraD

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TIGR03743: SXT_TraD 
conjugative coupling factor TraD, SXT/TOL subfamily
Members of this protein family are the putative conjugative coupling factor, TraD (or TraG), rather distantly related to the well-characterized TraD of the F plasmid. Members are associated with conjugative-transposon-like mobile genetic elements of the class that includes SXT, an antibiotic resistance transfer element in some Vibrio cholerae strains. [Mobile and extrachromosomal element functions, Other]
Statistics
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PSSM-Id: 274760
Aligned: 25 rows
Threshold Bit Score: 723.681
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011795854   6 MEGLLRPPVEGWSAATAYGIAGVAVA---APW-ALMMPQPLGLVTGA-IAAAFGTVRAREALHVYRYQRGLKFTKITRVA 80  Acidovorax citr...
WP_000661887   6 YEMPWRTNYEAMAAAGWLVGATGAIA---AEM-LTELPPEPFWWMTG-ISSGMALYRLPEAYRLYKLQMGLKGKPLAFMA 80  Vibrio cholerae
WP_011458786   8 VENLYRPAHELNASAVWTFSAVASLA---ASAlTPGMPIGVGVGLCG-ASLGMAAYRANQSWRLFEAKSALAGNSFWLAP 83  Albidiferax fer...
WP_011899407   8 YEMPWRPNYEMSAVFGWVAASVGALA---VQQ-ITDMPPEPFYWMTG-ICGVMTMARLPKAIKLHLLQKHLKGRDLEFIS 82  Aeromonas salmo...
WP_011875539   4 YINHFRPIYEVRATIGWLIALFALPL---SGM-------PYGGAFAL-FALALFAFRSGQVWRALKFRMGLSTKWLTTLA 72  Burkholderia vi...
WP_011288327   6 YEMPWRRAYEAYAAIAWGLALLYFVV---IGV-TGTLPRQLALPLSI-ACFAMGVWRVAQALHILILRAALCGRAVEVIG 80  Dechloromonas a...
WP_011797985   4 YEDMFRPAHEGYAVAGWAAGALLLV-----------LFRPPFWWAAFpVILVMLMFRGGQLETLWKFRLSLAVMLAPTIP 72  Polaromonas nap...
WP_011486064   6 FEQLLRPAFEARAAIGWGIAAIWMLI---CAV-LVNAPRGTLLASAG-LAVAMASWRMFGAQRLLKYKLSLSGKEVVIMK 80  Polaromonas sp....
WP_011811451   6 YEDLFRKAYEGYAAMAWGAGAVLLMVhrpPWW-HLIVP----------VLVLLSVSRALQVKRLWSFRLALSLARGRTIT 74  Verminephrobact...
WP_011486304   6 aDSLFRPVFEGRAALAWSLALLWIVG---LAL-FSNLSGTAMAMMLF-FAMFMMVLRYYQAAQVWDYKVRLSGAAIDKVS 80  Polaromonas sp....
WP_011795854  81 PHRLPVTr-------eHLYLGEGFEWTQKHTQRKLDTQAKKVQEYVrpsGMERQLAE-AGERI--------------RKW 138 Acidovorax citr...
WP_000661887  81 LSHLQKVmak---hpdELWLGYGFEWDQRHAQRAYEILKRDKKTLL---N------------------------------ 124 Vibrio cholerae
WP_011458786  84 TSYVDQEikn---ckqQLWLGLGFRWTTKHTQRATEIQKYEMEGLL---P-PAWALK----------------------- 133 Albidiferax fer...
WP_011899407  83 IKELQKKvqa---speDMWLGYGFAWENRHAQRVFEILKRDWTSIV---GT---------EST--------------TSK 133 Aeromonas salmo...
WP_011875539  73 VPTLLAIqnrmraevnAMYLGTGFEWTQKHCQMAHDILRMPTTEIP---GLPKWLPKtKAGRA--------------FEE 135 Burkholderia vi...
WP_011288327  81 TDALALYcpe----paSVFLGFGFEWQPVHSQRLYELAKIDYREFA---LSPRWL------------------------- 128 Dechloromonas a...
WP_011797985  73 ILTLLAKsrqmrkqkkSLYLGRGFQWGQRHAEIAQQVMNRNITEIP---DLPDFLKK-HIEKI--------------LET 134 Polaromonas nap...
WP_011486064  81 TTDLQKAmpk---lgeNLWLGWGYRWEPRHTQRAYEVLKRDLDDVY---P-PQWWLK----------------------- 130 Polaromonas sp....
WP_011811451  75 LADLMQRsrfy-ckrgMLSLGRGYSWTQRHAEIADQILNRNVDELP---DLPLFVRE-AMLELehkprdaltkidkmKLA 149 Verminephrobact...
WP_011486304  81 TSQLDGVqkq---lqdSVWLGWGWEWQPSHTQQAYDILKRDTEEIY---P-PNWFLR----------------------- 130 Polaromonas sp....
WP_011795854 139 VdskpkdpvrkavraAVDLGGTANPFATGVDLGGNPILHGVG-VlEERPVKLRQTSRSGHMLVMGTTRVGKTRLLELLST 217 Acidovorax citr...
WP_000661887 125 -------------------QGHGKQM-------GSTWIHGVE-P-KEEDVYQPVGHTEGHTLIVGTTGAGKTRCFDAMIT 176 Vibrio cholerae
WP_011458786 134 ------------------LMGRQHDFSN---VKGEPWIHGLE-P-NEKAIAIPWDHAEGNWNFFGTTGAGKTRLYELLAY 190 Albidiferax fer...
WP_011899407 134 I--------------VRTIRGKKKKEVPI----GQPWIHGVE-P-KEEHLMQPLKHTEGHSLIVGTTGSGKTRMFDTLIS 193 Aeromonas salmo...
WP_011875539 136 M--------------IENLFAPKDSIRDRTPQ-GASWIHGLE-P-AKGHVPFHYKAMGGHTAVGGTTGSGKTRTYEVIST 198 Burkholderia vi...
WP_011288327 129 -----------------QLLGYGPKPQPDAEI-GLPYIHGVE-P-QEVPLYRPLQNFEGGTLLVGTTQSGKGVALANLIT 188 Dechloromonas a...
WP_011797985 135 PphdrtaiqkaasvfVNRLMPKHTKVMNEAAL-GLPWIHGIGaV-EDEDISLPLSVLTGHTLILGTTRAGKTRLFELLTT 212 Polaromonas nap...
WP_011486064 131 ------------------WMGKTKDPR---KAKGLPWVHGLD-M-KESDVLLPFESLKGHCAIIATTGAIKTRLAALVIF 187 Polaromonas sp....
WP_011811451 150 V--------------IRKILPSNTKPVLDSDI-GAPWIHGIGiE-QEQDLGIPFTSLAGHTLITGTTRAGKTRLYESITA 213 Verminephrobact...
WP_011486304 131 ------------------LKGVKFDPRG---MKGRQWVHGLG---TEKDVIVPFTGFAGHTAIAATTGAIKTSLYKLLVY 186 Polaromonas sp....
WP_011795854 218 QDIHAGHVVIVIDPKGDAELMLRMQAEARRAGREDSFYLFHLGYPEISARYNGIGNFARITEVAGRATNALPSAGNSAAF 297 Acidovorax citr...
WP_000661887 177 QAILRNEAVIIIDPKGDKELKDNAQRACIAAGSPERFVYFHPGFPEHSVRLNPLRNFNRGTEIASRIAALIPSETGADPF 256 Vibrio cholerae
WP_011458786 191 QVIKKGDVLIVFDPKYDKDLRETLIRTCKAAGRPDAFCEFHPAFPERSIRIDPTKNFSRATEIPSRIADILGGA-PGDNF 269 Albidiferax fer...
WP_011899407 194 QAILRGEAVIIIDPKGDKEMRDNARRACEAMGQAERFVSFHPAFPEESVRIDPLRNFTRVTEIASRLAALIPSEGGGDPF 273 Aeromonas salmo...
WP_011875539 199 QVIHCGDVLIDIDPKNDKEWKARAEREAKRTGRK--FLYFNQAKPSESIRLEPLDSWSQPSEIPSRIAQLM----EEGPF 272 Burkholderia vi...
WP_011288327 189 QAIRRGDVVIVIDPKNSRRLKRVVERACADYRDQDTFLEFHPAFPERGVRLDFTFNWQKPTEIASRIQSIMP-PDTAGAF 267 Dechloromonas a...
WP_011797985 213 QVIDMGSALIVIDPKKDRDWVNRLRMECKRKGRK--FLYFDAAKPSESIRINPLANWNNISEPATRIGQLVDADG---SF 287 Polaromonas nap...
WP_011486064 188 QLALRGDCVIVIDPKGDRDLREICRQAAVLAGHPERFLMLHPAFASESVRLDLVKNWDQVSQVASRITMVL-GSQESDNF 266 Polaromonas sp....
WP_011811451 214 QIVDIGSALIVIDPKKDIDWVSMLKLMCRLKGRK--FLYFDPAQPSKSIRLQPLQNWNTKSEPATRIGQLVDADG---SF 288 Verminephrobact...
WP_011486304 187 QFVRAGDTVIIIDPKGDKDLKAIGQDAATACGDPSRFISFHPAFPSQGVRFDGLKNWERESQVASRITQIISAGEEGNNF 266 Polaromonas sp....
WP_011795854 298 KEFSWRFTNIVAQAQVALGRIPTYETLLKDVT---G--IDPLFMDYANMVFRKLAAegrfADYEDRLHDL-Q-KaIQAKK 370 Acidovorax citr...
WP_000661887 257 KAFGQMALNNIVQGLLLTSQRPDLKTLRRFLEg--G--PEGLVVKAVTAWGEQVYP----NFSVEI-----K-R-FTEKA 321 Vibrio cholerae
WP_011458786 270 IAFCWRVMYAITAGLLYVDERPSLKKLRFYIEs--G--PEPLVELCLKKFFNQWSP----GGWEDQVKAF-EeK-IAGKK 339 Albidiferax fer...
WP_011899407 274 KSFGWQALNNIAQGLILAYDRPNLIKLRRFLEg--G--ADGLVIKAVQAYAERVMP-----DWEAAAAPYlE-K-AANGS 342 Aeromonas salmo...
WP_011875539 273 RDFAYLFISRSVNGELYIGDKPNLRSILKYAQl--G--IDPLLEKALKRFFIESGL----TDWDELVTAD-TvK-IANKP 342 Burkholderia vi...
WP_011288327 268 SAFGWDAVNVVVQGLVEIEERPNLMKLTKYIEg--G--IEPVLEGSLRRYYDQTLG----AGWHDLPAMK-K-L-LNDAQ 336 Dechloromonas a...
WP_011797985 288 AAFAWKTLVRVQRGLVAAGERPSIKNTKHYVQm--G--VDSLAERVLTVHFMKKYG----PEWDRDIK-----N-SGVKD 353 Polaromonas nap...
WP_011486064 267 KEFCWMAVHRITNGMKYIGRRVSLYNLKTSMEs--RvsVEKLTEQALRKFFKEECP----QLLESIEKEInA-S-NAAGK 338 Polaromonas sp....
WP_011811451 289 AAFAWKTLYRVHRALIATGQRPTIRNTKRYVQm--G--VEGLAEKLLSIHFADKHG----PEWDRDL-----------KN 349 Verminephrobact...
WP_011486304 267 IDFCWQVITSIVACMKIIGRRPTIASILDHIRaldN--SEKLCEDVLVQWLTPRVD----NFSSQINEKI-Q-S-ITSAQ 337 Polaromonas sp....
WP_011795854 371 -APVPRS----L----A--------DRAPELVAMYl-WIKESRLEDKV-----------LLGLAAAFSYERSFYEKIVAS 421 Acidovorax citr...
WP_000661887 322 -NTLAKQ----A----M------------AMLLFYy-ERIQPVAANTD-----------LEGLLSMFEHDRTHYSKMVAS 368 Vibrio cholerae
WP_011458786 340 fKPRMQT----G----T--------PRQQAMVQVYh-EVVPVDSKIDD-----------VNGILSVAEHARDHYGKMIAG 391 Albidiferax fer...
WP_011899407 343 -RSKL----------------------AVAHMAFYn-NVIQPEHPSSE-----------LEGLLNMFKHDATHFSKMVSN 387 Aeromonas salmo...
WP_011875539 343 -GSTRVD----A------------------MISLYqaRFGANDRGHEA-----------IDGLIATHVHDREHYMRIIAS 388 Burkholderia vi...
WP_011288327 337 -RGNLKRpseaA----S--------ADLMAFVAYYe-HHIAQNQRNKV-----------IDAQVRTFRHNREHYQKITAN 391 Dechloromonas a...
WP_011797985 354 -GPAGQK----G----P--------PSR---LDLMiaKFIKDNEPDDA-----------IAGLISMITHSKEHFSKMIQV 402 Polaromonas nap...
WP_011486064 339 -RPVSKN----AvetnS--------PELSAMIKVFlsEV--PESHDEAtskglpakpeeVRGLVAILEANKEWFGKMIVS 403 Polaromonas sp....
WP_011811451 350 -LPKDGK----T----M--------TRLDW----CiaKFIADGESDDI-----------IEGIISMVKHSKEHYSKMVQV 397 Verminephrobact...
WP_011486304 338 -NAKGGR----A----KstfaekaePRLLALIAFFk-EYQGPKPAE-------------IDSLIGNLESNREWFGKMIVA 394 Polaromonas sp....
WP_011795854 422 LGPFLEKLTSGAVGKLISPDYFDPDDKRPIFDWMTVFRQGGIVYAGLDALSDSVVSSAVGNSMLSDLVSTGGKLYKTG-L 500 Acidovorax citr...
WP_000661887 369 LMPVLNMLTSSELGPLLSPIANDVDDSRLITDSGRIINNAQVAYIGLDSLTDAMVGSAIGSLLLSDLTAVAGDRYNYG-V 447 Vibrio cholerae
WP_011458786 392 MIPLLTQLTASPLDELLSPDYNDYADTREIVDMEKIIRDKRVLYIATDSLADATVGSAIAAVLLADLRAVAGARYNYG-I 470 Albidiferax fer...
WP_011899407 388 LLPIMNMLTSGELGPLLSPDATDLSDERQITDSAKIINNAQVAYLGLDSLTDNMVGSALGSIFLSDLTAVAGDRYNYG-V 466 Aeromonas salmo...
WP_011875539 389 ALPLLQMLATGETGLMLAPKVDDFEDEREIWTIEKVIRQKAVLHIGLDSLSNSIVAKAIASMILADVSAVCGSIYNF--- 465 Burkholderia vi...
WP_011288327 392 VLPILSMLTSGDLGRSLSPDPFDADDTRPIMNFEKIERAGHVLYMCLDSLPDPSVASAIGALALADQAARAGMRYNLG-I 470 Dechloromonas a...
WP_011797985 403 LEPILEMLGSDEIGDLLSPDPTNLEDKRPIYDMRKVIDEKAVLYVGLDSLSNKTIAQAIGSILLADIASTLGSIYNF--- 479 Polaromonas nap...
WP_011486064 404 ITPLLTKLTTDDLRGLLSPDYEDINDTRPIMDGKRLVEGNHIFYMGTDTLADESVGKAMSTMALAELSSVAAEIYNHG-V 482 Polaromonas sp....
WP_011811451 398 LEPILEMLGSDELGDLLSPDHQDLTDKRPIYDMRRVIDEKAVLYIALDSLSNKTIASAIGSILLADLSSTLGAIYNF--- 474 Verminephrobact...
WP_011486304 395 LTPTLTKLSTGDLRGMLSPDYDDPTDLRPIYDMGKVIQEGKIFYMGTDALSDPAVASAIAAFAISDLAAEAGSLYNYTeP 474 Polaromonas sp....
WP_011795854 501 nphsqdGKLQLPTVCCHFDEVNEIAGPEFVPMVNKLGGSGFRITAYTQSMFDIEAKV-GD-K-AKAGQIMDNFNHLVMLR 577 Acidovorax citr...
WP_000661887 448 ------E---NRPVNIFIDEAAEVVNDPFIQLLNKGRGAKMRCVIATQTFADFAART-GS-E-AKARQVLGNINNLIALR 515 Vibrio cholerae
WP_011458786 471 --------PDSTKIHILCDEACELVTPPLIAIMNKGRGAGMITYLATQNFSDYIWKF-DS-E-DAARMVIGNGNNRLCLR 539 Albidiferax fer...
WP_011899407 467 ---------NNLPVNIFVDEAAEVINDPFIQLLNKGRGAKLRLFVATQTFADFAARL-GS-K-DKALQVLGNINNVFALR 534 Aeromonas salmo...
WP_011875539 466 -------YDSPPEVVLIIDEIAEAINEQVIQILNKGRGAGFKAFVAFQTRADLEAKL-GN-A-AKMLQVLGNLNNQIILR 535 Burkholderia vi...
WP_011288327 471 ----------YRRIALFVDEVANVINQPLIEILNKGAEGGIFTTCAMQTLADLAKRL-GS-E-DAARMALGNLNNLIALR 537 Dechloromonas a...
WP_011797985 480 -------SSNPADCYLFVDETAEVANDQLTQILNKGGGAGMKVFLAMQSIADLSVCF-QSkK-DKAEQMLGNLNNLISLR 550 Polaromonas nap...
WP_011486064 483 as--kdDGSQPRRVHVVVDEWRDAACEPMIQQANKGRGAGFFIWALGQTFSDLVDKFgGN-T-ARARTFIGNMNNLIVGA 558 Polaromonas sp....
WP_011811451 475 --------STPTDAYLFVDEVAEVANDQLIQILNKGGGAGIKCFLAMQAIADLTVRL-GS-K-DKCEQVLANLNNIISLR 543 Verminephrobact...
WP_011486304 475 ------GQKRQKRVHLLIDEGSNAICAPLIEICNKGRGAGIHVYLAFQAFSDIVTKM-GG-DvNAAKRFMANMNNLIVGA 546 Polaromonas sp....
WP_011795854 578 VRSVATANLMAEQLPQVNVVHLTPMSGVSDTAAkGDGVDFLSRNDDIVTSVKSPLFEASDILELPQGQAFALLEGNRRFK 657 Acidovorax citr...
WP_000661887 516 VMDAETQQYITDNLPKTRLQYIMQTQGMSSNSD-SPAL-FTGNHGERLMEEEGDMFPPQLLGQLPNLEYIAKLSGGRVIK 593 Vibrio cholerae
WP_011458786 540 VVDTKTQQYMSETFGETTITSTMASMGSSTRTE-EPGMEFGGSVTNAVKEQAAEIFPGYLLGRLPDLHYVASISGGKLFK 618 Albidiferax fer...
WP_011899407 535 IVDAETQEYIAENLPKTRLKYVMRTQGQNTDGS-EPIM-HGGNQGERLMEEEADLFPAQLLGMLPNLEYIAKISGGKIVK 612 Aeromonas salmo...
WP_011875539 536 LEDTDTAEWFSKKVGDTAIRNLIVSSSTSKASE-GHVGEFTGSVTRSQQLEAVPLIPTRLIQTLPNLQYFMRISGGAVYQ 614 Burkholderia vi...
WP_011288327 538 TKDRPTQDFVVETFGKTAI--HTVRVGLSHGSD-AHLGDFSSSYSTQLSESFEEMVPADILGKLPNLQYFASVSGGRIIK 614 Dechloromonas a...
WP_011797985 551 VQSVETAQYVSDKFSEVGTRAMDVAFSSGSGSS-EAFTEFRSNVSRSLKTTNTALVSPALLTKLPPLHYFAFIAGRSYIK 629 Polaromonas nap...
WP_011486064 559 TQDPDTMNLIIDKLGETSIIVKSQSTGMGSKTE-DVGLEFSANQSESISEKTVEIFPRSLLPQLQDLHYIGFFNRGELIK 637 Polaromonas sp....
WP_011811451 544 IRSAETAKYVSELFGEVKTRTMDVSYSSGSESS-AAFTEFRSNTSRSLKAERSSLIPATLLTRLPPLHYFAFLAGRGIYK 622 Verminephrobact...
WP_011486304 547 TQDTDTLDLISDKFGEVDVVSANRSQGSGQKTE-DVGLEYSATKSISFSEKNRVMIPRSVLMSMPDLQYVAVVNRAKIFK 625 Polaromonas sp....
WP_011795854 658 IRIPLA 663 Acidovorax citrulli
WP_000661887 594 GRIPIL 599 Vibrio cholerae
WP_011458786 619 GRLPKL 624 Albidiferax ferrireducens
WP_011899407 613 GRLPIL 618 Aeromonas salmonicida
WP_011875539 615 GRIPIL 620 Burkholderia vietnamiensis
WP_011288327 615 GRFPII 620 Dechloromonas aromatica
WP_011797985 630 GCLPFI 635 Polaromonas naphthalenivorans
WP_011486064 638 GRIPVI 643 Polaromonas sp. JS666
WP_011811451 623 GALEFI 628 Verminephrobacter eiseniae
WP_011486304 626 GRIPIL 631 Polaromonas sp. JS666
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