Conserved Protein Domain Family
PRTRC_B

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TIGR03737: PRTRC_B 
PRTRC system protein B
A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. This protein family is designated protein B.
Statistics
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PSSM-Id: 274756
Aligned: 10 rows
Threshold Bit Score: 310.474
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011797951  13 MALQKAILVYGVAKRnlydpdqslA--ITHATINDVE-M--KSGAPVLKAGRLMTQSDLNELVTGLSQSQSL-SvPSWID 86  Polaromonas nap...
WP_011154220  13 VALQGAILLYGQGPG---------Q--FSYATAHRIE-Pd-GSGRPVIGAGTPLNRMALIHAVREVAEASLP-N-GEFLT 77  Cupriavidus nec...
WP_011485921  13 YVLGAAVMLYSKASNy-------lDcsGAIATVHHVH-D--IDGKPVIGAGRPMTEADYLAMVKVLAPQQRP-Q-MEWQD 80  Polaromonas sp....
WP_012367185  13 VALSQALLLYTGKd----------G--AHFATAHAVI-AdrQSGRPIIGAGRPLDRKVLVQTLQQLAEHVAP-R-AEFLP 77  Burkholderia am...
WP_011254877  12 FRASHAILLYGQR-----------R--PSYASVHSVGvD--SSGELSIEAGVPATVDGLRKMFDSLDPSRSA-R-PVFLE 74  Aromatoleum aro...
WP_011804868  16 LELDQAVLLYHGHSG------------SALATVHEVT-T--VDGAPVIGAGRAMTAQAARELAGALLQRAAH-G--GFLP 77  Acidovorax sp. ...
WP_011458646  11 FELEKAFLVYGARSSys-----rrE--VGYVSEHNVN-In-SKGVPTIMKGRALKKDSLMAALRQLARQQGIsD-LVWVD 80  Albidiferax fer...
WP_011001600  13 LKLSHAVLLYTTASPh--------T--AVYATSHPVE-L--LPEGPQILPGGPLSLGELSEFVEAAQTATAY-R--GFIE 76  Ralstonia solan...
WP_011783190   8 FVQSCALVIHRARFGds------qD--TFSILAHDIH-H--TETKSVLGAGRPFGHDDKMSLMAMLGDYRGS-D-LEFLD 74  Marinobacter hy...
WP_011486340  14 HIPRSAIVFYGSSEKe-------dA--TTFATHHVVR-K--SDGEFELAPGVTLTSKNLKLLAQQAQQGLKQ-D-FEVIP 79  Polaromonas sp....
WP_011797951  87 TTMLALGAGRMIWYTPACQRAMFF-----K-TSS--------FTkdtfEAQGQLPTPGLVWLVMQ--------GALYVYA 144 Polaromonas nap...
WP_011154220  78 PNVLSISPTAVTWWCPAAQRRVFF-----D-CKE--------FG----KRSAVVPHPALVFQASQ--------SGFRVFA 131 Cupriavidus nec...
WP_011485921  81 HCILAKGMGKMIWWTPPMNRAMFF-----KkSDM--------FGattfSGQGICPLPGMVWMSDG--------RDLFVYA 139 Polaromonas sp....
WP_012367185  78 PTVLGVSPDAVTWWCAPAMRRVFF-----E-CEN--------LG----KRSAVVPHPGLVFQASN--------QGFRVFA 131 Burkholderia am...
WP_011254877  75 PNVLSQGPGWLVWWMKPQTRRVWF-----E-SKE--------IK----LETAEVPHPGLVFAVTQ--------EEWRVFA 128 Aromatoleum aro...
WP_011804868  78 ETVLYLHGDLLVWWVPPARRHVAFrvgaeQ-AEA--------FGg--rERGETVAQPGLVFAAAS--------KVWRVWA 138 Acidovorax sp. ...
WP_011458646  81 DQTIATSSTLQVWWTPAQSRWMHF-----Q-SQG--------LQ----L-SLPAQNPPLVWLACG--------ECLMVFA 133 Albidiferax fer...
WP_011001600  77 PHVLYLAPNTVAWWRPAAPRTVWFs----A-EKP--------IG----TRHGVTAHPPLVFIVHE--------RQWYVFA 131 Ralstonia solan...
WP_011783190  75 AKCLASSHETMMWYRPRSKTVVNI------------------VG-----HEYTVAVPSLVFMLHK--------GSLHVAA 123 Marinobacter hy...
WP_011486340  80 ANVLVANDSLLAWWMPKGTQLMSF-----D-VSMhelagksrLQ----GVSGNVPTPALVFAMMRnrnaggafEGLYVFA 149 Polaromonas sp....
WP_011797951 145 YKGSGRPDKETKLYQAPFFNVWSQ-GKVCTGNAAMPVGDNAAIPHMWVDAFFGSNFTHPNFKEKd-RLVKGVCPI----D 218 Polaromonas nap...
WP_011154220 132 LRGDERPVPASELCEPPYFNTWDH-GKICIGSAHVPKQIDVASIAGWEAGFFNSAFTHPNHGSK--RVTYERGAY----A 204 Cupriavidus nec...
WP_011485921 140 YRGSAMPGKETRLCQAPLFNVWAR-GEVCVGNASRPDDSAKGNPQAWERFLFDSHFTHPNFAQVd-RLTKGVKPA----E 213 Polaromonas sp....
WP_012367185 132 VACTGRPVRETPLFEPPYFNTWDM-GRICIGSAQVPKRVDVASIDGWEAGFFNSAFTHPNAGGK--RIEYQDGEY----A 204 Burkholderia am...
WP_011254877 129 VQGRSRPRPGTKLYQAPYWNVWKG-GRICAGSARLPSAGLQADPSGWEESFFSSRFSHPNIHEKdaLVKYKGGSA----K 203 Aromatoleum aro...
WP_011804868 139 VKGHHRPTPQTPLFQAPYFNVDGK-GHICQGNVPVPNGTTVEKISAWNDAFLRSYFTHPNVAGK--LLRYRGGAY----A 211 Acidovorax sp. ...
WP_011458646 134 LKENIKPGPTTALHHAPLFNVFAN-AEVCAGSMQKPKD---GNAKEWVESFYAATFTHANPPSRr-LTTYRQGEK----A 204 Albidiferax fer...
WP_011001600 132 LAKNERPAPNTPLHVAPYFNVWER-GEICTGNVSLPDRPAPDALKAYETAFFDSRFTHPNHAr---ITRHKDGGG----A 203 Ralstonia solan...
WP_011783190 124 YKGERRPERNTKLLHCGLPNIQSNiGHWCSGGNRLPDRPHQGQIEKLEDMFFTSPFTHWNPEYAavEDTSTVGSNkqmeT 203 Marinobacter hy...
WP_011486340 150 LEKSERPTSDTSLYRAPLLNVGED-GSVCWGDGVKPAGKTVKDISAWQALFFSSVFTHYNGT----VPIVGDDPY----A 220 Polaromonas sp....
WP_011797951 219 FWKAMTEKPL-PV-FPEGRLVDLPLTVADLLAPDLN 252 Polaromonas naphthalenivorans
WP_011154220 205 FWKDMLDGQF-PD-YPKQVLVPMKLKLADLIAGKLE 238 Cupriavidus necator
WP_011485921 214 FWKKMVAKPA-QK-FPESVLVDLELKVEDLMEPDFR 247 Polaromonas sp. JS666
WP_012367185 205 FWRDMLDGKF-GEtFPLNTLVPMKRTLEQLVNGQVG 239 Burkholderia ambifaria
WP_011254877 204 FWNAMLSGKF-KS-FPQEVLVPAELTVRDLLAQIGG 237 Aromatoleum aromaticum
WP_011804868 212 FWRDMLDGRF-TR-FPERVLVDAKTTLGQLLGEPEA 245 Acidovorax sp. JS42
WP_011458646 205 LWKHLMTSKK-KPaFPTDKLKPFGKTLGEVVQNLEK 239 Albidiferax ferrireducens
WP_011001600 204 LWAHLLDHPEiTE-FPATALLPRKEALTQAITRITA 238 Ralstonia solanacearum
WP_011783190 204 FFKD-LQGKA-R--FPVSKLKDMGCELEQWMRHITT 235 Marinobacter hydrocarbonoclasticus
WP_011486340 221 FIADLMETEA-KE-FPAAALKPMKKTIGATLSRLGE 254 Polaromonas sp. JS666
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