Conserved Protein Domain Family
PRTRC_parB

?
TIGR03734: PRTRC_parB 
PRTRC system ParB family protein
A novel genetic system characterized by six major proteins, included a ParB homolog and a ThiF homolog, is designated PRTRC, or ParB-Related,ThiF-Related Cassette. It is often found on plasmids. This protein family the member related to ParB, and is designated PRTRC system ParB family protein.
Statistics
?
PSSM-Id: 274755
Aligned: 9 rows
Threshold Bit Score: 710.711
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
WP_011797948  19 LIDRGNNPRT-RFDETAMDEMVASFRAHG-ILQPILLR---PSGESR--------------FQIIAGERRFRAFTTVYGM 79  Polaromonas nap...
WP_011154224  10 KIRPGRNPRK-YFDPVQMAELTESIRVDG-ILQPILIR---PVEGDEng----------heYEVVAGERRYRAALAAHGE 74  Cupriavidus nec...
WP_011804864  16 RIVQGKNPRE-YFDPAEMAELEEGVRAVG-VLEPIVVR---PVPGTDl-------------YEIIAGERRWRAAKNVFGD 77  Acidovorax sp. ...
WP_012217987  15 RIKLGRNPRT-YFDDAKMAEMKASISARG-VDTPVIVR---PVDDGY--------------FELIAGGRRYKAALETRGE 75  Burkholderia mu...
WP_011288274  13 LIVQGKNPRE-YFDPIEMADLEAGLRAAGrVVQPIIVR---PIPGTDl-------------FEIVAGERRWRAAKNVFGD 75  Dechloromonas a...
WP_011254874   8 EIVVGNNPRK-FFDPAEMEELTASIREKG-VIQPILVR---PLQDGg--------------YQVVAGGRRYAAAKAAHGD 68  Aromatoleum aro...
WP_011485908  11 FPQKGFNYRR-RFNQAAMDELVEDIQRQG-ILQSILVRgsdPAEQSElprliklsdikagkYQVISGNRRVHAVEIALGE 88  Polaromonas sp....
WP_011458641  14 LHVPSYNPRRkVHDDQDWQDFKDSLKSKG-VLQAILAR---PVQGKKt------------pYEVVAGQRRFLGSLEVFGQ 77  Albidiferax fer...
WP_011783194  34 HKREGHNPRR-IRSKSKMSDLRESIRDKG-VIQPILVR---PHPQIDg------------eYELVAGETRLLLSREVGRT 96  Marinobacter hy...
WP_011797948  80 GVDIsiPALVVEMDDAQADMSALIENVIREKMTPVEEAEAAARVLGYSQGDRDEAARKLGWERKFLDRRIALMYAIDEVR 159 Polaromonas nap...
WP_011154224  75 GYHI--PVTLKVITDAEADRMALIENVQRADMAPSEEAVAASRIAGQLQGDRDEAARLLGWSRSTLDKRLALMNCSESVL 152 Cupriavidus nec...
WP_011804864  78 GYDM--PVVIKDANDETAEAMSVIENYHRAAMSPAEEAHAAQRQLLRQRGDKEEAARLMGWSPDVLERRLALLACTPAVL 155 Acidovorax sp. ...
WP_012217987  76 DYDM--PVNVKDVSDEEAEEIALIENIQRDDMSPGDEAVEAARLLGRCKGDREEAARRIGWSLPTLNSRLALLNCSNEVL 153 Burkholderia mu...
WP_011288274  76 DYDM--PVVIEALNDEEAEAIAVIENHHRAPMSHAEEAHAAKRQLLRHKGDKEEAAASLGWKPELLERRLALLTCTPAVL 153 Dechloromonas a...
WP_011254874  69 DYPM--PVVIKELDDDEAEELALIENVQRADMSPAEEAEAAAKILARSEGDRDDAARRLGWSRATLDKRLGLMNATDAVR 146 Aromatoleum aro...
WP_011485908  89 EAEV--PALVRMMTDAEAMAAMVSENKVREDTTAIEDAEAAMRMLGLLNGDREEAAKRLGWSPQVLNSRLGIMNATDKVR 166 Polaromonas sp....
WP_011458641  78 DYQI--PALIKVMTDEEAEAASAAENLQREPMSPAEEAEAAARELARCNGDREETAKRMNMSRLKLDNRLKLMACSPLVR 155 Albidiferax fer...
WP_011783194  97 E--I--PALIKHLTDEEMLDYAATENIQRIDMSPVDAGLAAQALLAQGK-DKEEVCRIMGWTPAFFDGRIQLTHCCDEVS 171 Marinobacter hy...
WP_011797948 160 QALQDEKILLGHAELLAGLRKETQKQVLTALLssAE--K--P--TVAQLKDRLEKAALSLVKAIFEKSQCTDCQHNSGNQ 233 Polaromonas nap...
WP_011154224 153 NALNTRVIQLGHAELLATLAKATQDKLLPVIV--SE--K--K--SVSELKKTIEAAACSLEKAIFDKTECASCQHNSSLQ 224 Cupriavidus nec...
WP_011804864 156 KALTTRTIQLGHAELLSGIPPDKQDSVLTGIV--AQ--K--V--PVAVLKAQLGRYARRLADAIFDTAQCGGCPHNSARQ 227 Acidovorax sp. ...
WP_012217987 154 AALNTRRILLGHAELLAALSKENQDRVLPVII--DE--K--K--SVAEVRKLVESAACSLSAAIFDKADCAACPHNSALQ 225 Burkholderia mu...
WP_011288274 154 SALTCRQIQLGHAELLAGVPPDKQDAVLTGVL--AH--K--V--PVGVLKEQLGRFARQLSAAIFDTAPCSACPHNSARQ 225 Dechloromonas a...
WP_011254874 147 TALAERRIKLGHAELLAGLPRPKQDHVLERLL--KT--P--VlaGVAEFKQEIQKLANALSTAVFDKTECAQCPHSSGNQ 220 Aromatoleum aro...
WP_011485908 167 DAYIDEKILLGHVEILAALIKDVQDGVLEKML--AR--PklP--TVAELKAMAEQILLNLDAAIFDKAECGGCHYNTGKQ 240 Polaromonas sp....
WP_011458641 156 QRLIERRLKLGVAEMLSGLTMVKQDELVSQ-F--DKigI--P--SIEDVSAMILSLTKALPSAIFDPVDCGACAHNSARQ 228 Albidiferax fer...
WP_011783194 172 QALVDEKIALGHAQLLSSLRETSQKNALQAIL--EK--N--L--TVDQLSKIISGMALTLKAAAFDLTDCQTCPHNSNTQ 243 Marinobacter hy...
WP_011797948 234 QALFAE--AISDGNCTHKPCFERKTERELGIRARALEADYQVVRIVYPGDNFTVVQLAADGVRGVGQEQAAACRSCKDYG 311 Polaromonas nap...
WP_011154224 225 TEMFGE--AIATGNCTNRACYTEKTDRKLDSISYGLKDEYQVIRIVRPGDNHTRIQLQVDGSTGVGEEQAKACHGCENFG 302 Cupriavidus nec...
WP_011804864 228 SGLFVE--SLGGGYCQHPSHFEELTQQAVESRANALRDEYPVIRIVKTGDGFTPLPVTAEGDLGVGAPQYTSCQGCQSFG 305 Acidovorax sp. ...
WP_012217987 226 SEMFGE--SIATGNCTNRQCYNGKTDQRLEAIAEGLRDEFPVVRVVRAGDNHTRVQLAVDGPNGVGEAQAKACHACQNFG 303 Burkholderia mu...
WP_011288274 226 AGLFDE--SLGEGYCQHPTHYDELTLLAVEAKAQGLRDQYPLVHIVKATDGSAYLPVAVDGELGVGAAQYTACQGCASFG 303 Dechloromonas a...
WP_011254874 221 KALFSE--AVDEGHCTNRECWDGKTEAALEEIRKELVEDFPEVRIVRPGENFTVIKLVAEGGSGVGDAQAQACRSCGKFG 298 Aromatoleum aro...
WP_011485908 241 QAMFET--SFEGTRCTNRGCYEKKTEAELESRRLALIGDYQVVRIVRPGDNMTVVPLRADGAKGVGKGQALACRTCGDFG 318 Polaromonas sp....
WP_011458641 229 QAMFGN---IGEGHCLDAVCFDNKTEAQLQLTVDKLKDDFQRVEIVRPGDNFRVIRLTPES---IGESQAIACRSCKDFG 302 Albidiferax fer...
WP_011783194 244 TSLFADskSLGKARCLNKECFNKKNQNHLDSVKADLSESFHRVAFTSELAAGTTTVIVESGTYGVGEEQATACQSCEHYG 323 Marinobacter hy...
WP_011797948 312 AVVSALPDKLGASFKGMCMNTVCNNTKVADRIMGEKAAAS---A---LADQTIAKAQDDTKAKAKsps--------qaaT 377 Polaromonas nap...
WP_011154224 303 AAVSGLPDSLGKVYSGQCFDTVCNQRKVAARLKAERDAKA---A---AQKPAGGPAGSGKPAAAK--------------G 362 Cupriavidus nec...
WP_011804864 306 CAVSAMPGSYGEVTRSLCFDAACNSQKVALWRKAQRDAQA---AldeAQGKGAVKAGAAKPTCKK--------------- 367 Acidovorax sp. ...
WP_012217987 304 VAVSGLPDSLGKTYRGQCFDTVCNMRKVADRITAEKVAAK---A---ATTDAEGSPVPGKAAGK---------------S 362 Burkholderia mu...
WP_011288274 304 CAVSALPGSYGDVTHAQCFYAACHTAKVAAWRKAQRESG-----------QEAPSGTGKTPAKRK--------------P 358 Dechloromonas a...
WP_011254874 299 AAISAVPGKVGKVFKDLCFDSGCNAEKVKANHQAIVAAAR---S---AQP-AAPTPGATTTGSASn-------------T 358 Aromatoleum aro...
WP_011485908 319 ACISAAPDKLGMSFKDVCFNSTCNAEKVDARVKAEQQAEA---A---ARAPETAGATGSADAKEAtpa--------pkgT 384 Polaromonas sp....
WP_011458641 303 AAVSAMPNKLGKVSGGLCYGIECNETKVKDFKAAQEALNSpppT---AEKPSGAAAGPGTPPVEGskaa------gavkP 373 Albidiferax fer...
WP_011783194 324 ATIDNTLGSRAAVTKNVCFNLPCHTNKVQEHKNLIATDKAp--A---TDNSDKPATQVDTATSEAkatettdnsasaakS 398 Marinobacter hy...
WP_011797948 378 SasevkagtSKVQTGAVKAPVSSEPSNALKEYREKVWRSVLSRVIArLDPETNQCVMLALAAFS-PRVIDSTALLEAITK 456 Polaromonas nap...
WP_011154224 363 G--------DKSSASAEKPVTSISESEKVKNYRTDLWRKALRKEVA-QNADQANAYLISIALNGlARNIGGDKMSKFFEK 433 Cupriavidus nec...
WP_011804864 368 ---------------RKLAAPTNQTPQRVVSHRVMEWRKWLAKALM-AQPQCSQRVLIALALAGrGADLREAQFRNAFGR 431 Acidovorax sp. ...
WP_012217987 363 A--------SGSDASAPTAVTVVAESDRVKQYREALWRKALRRDVG-KDAALARQYLIAIVLAGyARQIKDEVFRSVYEK 433 Burkholderia mu...
WP_011288274 359 S--------GAVHPAATVAPPSNQTPQRVKDYRVAQWRKWAARELM-AQPERNRRVMIALARAGhTGDVRTAEFGQVAQR 429 Dechloromonas a...
WP_011254874 359 S--------PAAKPATQKKAAEVQDSTRVKEYRAKVWRSALAKHLY-MNPEIGERVLLALCMSGdARHISATQLGKAFAK 429 Aromatoleum aro...
WP_011485908 385 G--------GTKQAKAPTKAPSSEPRNAVKEYRESVWRKVFHRAALrLPVAQSRALLIALCLHS-PRTLSHDDATKAVGK 455 Polaromonas sp....
WP_011458641 374 A--------KAEKPITEAAKPTVGLSGAVLDFRDVLYRKVVFKELA-VNSEFNARFVMAIVLNSqGRLFKGEEVKSVFLK 444 Albidiferax fer...
WP_011783194 399 K--------AAAKPAKKPEVAKSAIPRKIVDLHHQVHRTAAAAHVY--EDDKTALIISVLSMMSdANVEPDKKPQGWPMN 468 Marinobacter hy...
WP_011797948 457 SSILLq-nNATDIGVV-LDSAMALDNDALKKALSLIPASISKDLEIRQVVSLLKGL----DVKLEEHWKVNDE----MFG 526 Polaromonas nap...
WP_011154224 434 LTEQK---ASSTLQGC-LTAVHALDAGKRQQLTVALTVAAIDGMEVPNLKELCRFH----KLDLRAHWSLQKSq--yFLE 503 Cupriavidus nec...
WP_011804864 432 LAGQAv-gAGFGVRGG-LQRAAAAPEAQLERLLQAATASAAFGVTVTDLELLLNYA----QVDEGRYFQWNKE----FLD 501 Acidovorax sp. ...
WP_012217987 434 VTDEKa--PAADLSKA-LILACATSDEQAATLVTGMFVAAIEGLDVTYLKQLCKHH----NLDLTQYWKLDKE----FLE 502 Burkholderia mu...
WP_011288274 430 IAGPWv-vERLDFATM-LPEAEAIDPQHLEQLMLAVTASAAFGVGLHDLEALLNYI----EVDEGRHFKWSTE----FLE 499 Dechloromonas a...
WP_011254874 430 LTQGSs--PSLSLTVA-LTQVGEASDEVVSKLKVMLPAATAEGLEEHKVVALLNEL----KVNLADHWTLNTD----YLG 498 Aromatoleum aro...
WP_011485908 456 VIGNDd-lSSQEAGEL-LGSLLKLDQKGLGDSLQQIPAFVGSDLSIKAISELMSAL----DIKIEHHWKVNEA----FFD 525 Polaromonas sp....
WP_011458641 445 KGWMKsdlSAYGLRDA-MKIMMDIPKEHALNMLPNLGAVALTDLTRAELKDLTILA----NPDLANYFTLNDEsgkmLLE 519 Albidiferax fer...
WP_011783194 469 LTGENrakAAAMLDTLsMEQLTTMQRRIAAKVMQKAKSSFGGENEKDAFGSVAVWVaksrEVDLTKHFTMDSE----YLE 544 Marinobacter hy...
WP_011797948 527 LLTKNEIDATCGEIGIKAAIGTG-----YPKLIGGKKDDLVNAILTITGFEYKGRIPKQMRW 583 Polaromonas naphthalenivorans
WP_011154224 504 MLTKSEMKVLADELGIRKALGDS-----FAKLFNKPKPEVIAGLLAVDGFDYTGKVPKVLGF 560 Cupriavidus necator
WP_011804864 502 LFTMSELESLAAEVGLKKAMGSG-----FKAARAGKKPDFITALLKVPGFAYQGTVPTVMRY 558 Acidovorax sp. JS42
WP_012217987 503 LVTKAEMMVIADELGLRAAMGDN-----FKKVFSKSKADVISALLAVEGFTYEGKLLKVLKY 559 Burkholderia multivorans
WP_011288274 500 LFTISELESLASEVGLKAKMGAA-----FKLARAKKKGDFIKSLLAVPGFAYEGTLPVVMQY 556 Dechloromonas aromatica
WP_011254874 499 LLTKSEIRVAAEQIGLAARMGKD-----LDKVLGEKKDECVKKLLAVSGFDYAGKLPANVMW 555 Aromatoleum aromaticum
WP_011485908 526 LLTKTEVDAVCIELGLDKAIGKE-----YPKLKVGGKAEYIKALLAIEGYDYVGKIPALMRW 582 Polaromonas sp. JS666
WP_011458641 520 KLTKTEICAICDEIGITEKMGKT-----FRSISGGKKSEFIKHITSLVDFEYKGKVPNVLRP 576 Albidiferax ferrireducens
WP_011783194 545 PFTKPMATQRLKDSGFAEAYDKEhgekaFAKLAAGKKGDLIKAVKDSP-FDFAGYLPEGLKL 605 Marinobacter hydrocarbonoclasticus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap