Conserved Protein Domain Family
clan_AA_DTGF

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TIGR03698: clan_AA_DTGF 
clan AA aspartic protease, AF_0612 family
Members of this protein family are clan AA aspartic proteases, related to family TIGR02281. These proteins resemble retropepsins, pepsin-like proteases of retroviruses such as HIV. Members of this family are found in archaea and bacteria. [Protein fate, Degradation of proteins, peptides, and glycopeptides]
Statistics
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PSSM-Id: 163410
View PSSM: TIGR03698
Aligned: 10 rows
Threshold Bit Score: 110.143
Threshold Setting Gi: 499226256
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010878116   8 VIEIVLSNPllsvKFPE--SGSVLAVIDTGYEGFAVVPQDIFKKLRLDELSQHKRALTLPTERLIE-STgsYARIIIPEL 84  Archaeoglobus f...
WP_012717957  14 ILHVKVSDP----KNEN--SAEIDVLVNTGFSGWLLLNYEIYTKLNYMEIPITRKYRSILGNIEVY-MA--KASISINRL 84  Sulfolobus isla...
WP_011121790  19 FVDLEIQLD----DTTH----TIAFLVDTGFNGFLSIPFRLVHQLGLPLSDVQQGVTADGRSSFFD-TV--ELTVIWHGN 87  Rhodopirellula ...
WP_011317759  12 TVNVIFRLP----NQPD--F-TIEFVIDTGFTEFLSLPPAAVNLLGFPFVYDMYANLADNSRVLLP-VH--QASIIWNGE 81  Anabaena variab...
WP_010923374   9 SLDFEL--------ETE--GIKVRAKVDTGFDGEIIVTKEIFDKIPYNSSDGTRICTASMECYSTF-VK--LVRTKFLGR 75  Sulfolobus solf...
WP_011362294   5 HVTVTIRNP----ANPEk-FWEGLFLVDSGAIDSL-VPRDALESIGLKPKAQRSYELADGTEIKMD-IT--TGDIEFMG- 74  Chlorobium chlo...
WP_011008954   5 FAEVEISGR------------RYRALVDTGFNGELVVSRRVAEEAGLRPFRTRERVLADGRVVKTG-VA--VAVVKINGE 69  Pyrobaculum aer...
WP_010923796  15 TLPVTVIDP----YNGD--FMEVRALIDTGFSGYLLIPPSVYNKVNSLELENPRVYATLNGIVKTR-VA--KAIIKIGKI 85  Sulfolobus solf...
WP_010872249   5 YANIELINP----KEQAlqPMKVNALVDTGAITLC-IPEHVVIQLKLETLEQREVTTADSKKRLVDyVG--PVQVRFGNR 77  Synechocystis s...
WP_011278700   2 NLDLNLNG------------INVSFKIDTGFDGECLLPHDIFSKIGGYEYDGPPVSLSDGRGYLTR-AK--IVEVVFNGK 66  Sulfolobus acid...
WP_010878116  85 KTfrDGFVETTDGVD-EI-VLGTEFLEGFKLVLDYCTRSF 122 Archaeoglobus fulgidus
WP_012717957  85 NI--DAFIESSPYVE-MN-LLGREILKKLNICFYRMNKIC 120 Sulfolobus islandicus
WP_011121790  88 PL--TVQAQVLD----EP-LLGTRLLRGSKIEAAWIQGGM 120 Rhodopirellula baltica
WP_011317759  82 ER--EIHVLATGRL---P-LLGTALLDGYELSIQFTEGGL 115 Anabaena variabilis
WP_010923374  76 EI--TAEVLNSPVIE-KN-IIGEGLLKKVSAVINYKDNKI 111 Sulfolobus solfataricus
WP_011362294  75 EI--VGGTIIFGASDtEP-ILGVTALESVGIDIDPRNQQL 111 Chlorobium chlorochromatii
WP_011008954  70 ET--EAFVEILDELPlDV-LIGVYALERLGYVVDPRTGRL 106 Pyrobaculum aerophilum
WP_010923796  86 KL--DTLIESPILGR-EIsLLGRELQKILHIEFKKGKEVC 122 Sulfolobus solfataricus
WP_010872249  78 NC--FTGALVLG--D-AV-LLGAVPLEDMDLVISPRSQTI 111 Synechocystis sp. PCC 6803
WP_011278700  67 NL--ILECISVVYIN-KT-LLGERALSKLGILIDYKNQGV 102 Sulfolobus acidocaldarius
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