Conserved Protein Domain Family
ribo_P1_arch

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TIGR03685: ribo_P1_arch 
50S ribosomal protein P1
This model represents P1 the L12P protein of the large (50S) subunit of the archaeal ribosome.
Statistics
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PSSM-Id: 274724
Aligned: 32 rows
Threshold Bit Score: 68.921
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011323930   1 MEYVYAALILHESGEELNEDNLTDVLDAAGVDVEESRVKALVAALEDVDVEEAIETAAA-VP------AGGAGGA--AAG 71  Natronomonas ph...
WP_013776097   1 MEYIYASLLLHSAKKDITEDNLKNVLTAAGVNVDEVRVKAVVAALKEVNIDEVLKNAAA-MP------VAAAAPA--QAQ 71  Acidianus hospi...
WP_010979405   4 MEYIYASLLLHSAKKEINEENLKNVLTAAGITVDEVRLKAVVAALKEVNIDEVLKNATA-MP------VAVAAAP--AAA 74  Sulfolobus toko...
WP_011278279   1 MEYIYASLLLHAAKKEISEENIKNVLSAAGITVDEVRLKAVAAALKEVNIDEILKTATA-MP------VAAVAAP--AGQ 71  Sulfolobus acid...
WP_010900786   1 MEYVYGALLLHAAGKEVDEEKLKKVLEDVGVQVDEARLKTLVSGLKDVNIDEVLKNASVaQV------ATAPAPA--AEE 72  Thermoplasma ac...
WP_010916678   1 MEYVYGALLLHAAGKEVDEEKLKKVLEDVGVQVDEARLKTLVSGLKDVNIDEVLKNATV-A-------PVAAAPA--APQ 70  Thermoplasma vo...
WP_011177241   1 MEYIYGALLLHSAGKEIDENNLKKILEDAGVNADEARLKSLVESMKNINIEDVLKNAAA-A----------PVAA--PAP 67  Picrophilus tor...
WP_010866840   6 KAYIHLALAIYYAGGKIDEETLKKAAEAIGMQVDEAKIKMLVASLEEVNLEEVLKQAVA-AP------VAAAAAA--PAA 76  Aeropyrum pernix
WP_011008145   1 MEYIYGALLLHYAKQEINEENLARVLQAAGITPDEVRIKTLVAALKEVNIEEAIKSAAF-AP------VAAAPAAaaPAA 73  Pyrobaculum aer...
WP_011763425   1 MEYIYGALLLHYAKQEINEENLTKVLQAAGITPDEVRIKTLVAALKEINIEEAIKSAAF-APmvaapsVATAAPA--SAP 77  Pyrobaculum isl...
WP_011323930  72 GAAEADEAEEadeggdadeaeEAEEEAEDDGDDEDGGEGLGELFG 116 Natronomonas pharaonis
WP_013776097  72 AAPAKEEKKE-----------EKKEEEKKGPSEEEIAGGLSSLFG 105 Acidianus hospitalis
WP_010979405  75 PAQQAEKKEE-----------KKEEEEKKGPSEEEIGGGLASLFG 108 Sulfolobus tokodaii
WP_011278279  72 QTQQAAEKKE-----------EKKEEEKKGPSEEEIGGGLSSLFG 105 Sulfolobus acidocaldarius
WP_010900786  73 KKKEEPKKKE-----------EKKKEEDKEHEEEEAMSGLSALFG 106 Thermoplasma acidophilum
WP_010916678  71 EKKEEPKKKE-----------EKKKEENKEQEEEEAMSGLSALFG 104 Thermoplasma volcanium
WP_011177241  68 AKEEKKEEKK-----------EEKKEEKKEESEADAMQGLSSLFG 101 Picrophilus torridus
WP_010866840  77 APAAEEKAEE-----------EKKEEEEEKKEEEVDLSGLSGMFG 110 Aeropyrum pernix
WP_011008145  74 TAAAASAPQAkae-------ekkEEEEKKGPSEEEIAGSLASLF- 110 Pyrobaculum aerophilum
WP_011763425  78 STPVAKAEEKk-----------kEEEEKKGPSEEEIAGSLASLF- 110 Pyrobaculum islandicum
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