Conserved Protein Domain Family
IsdB

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TIGR03657: IsdB 
heme uptake protein IsdB
Isd proteins are iron-regulated surface proteins found in Bacillus, Staphylococcus and Listeria species and are responsible for heme scavenging from hemoproteins. The IsdB protein is only observed in Staphylococcus and consists of an N-terminal hydrophobic signal sequence, a pair of tandem NEAT (NEAr Transporter, pfam05031) domains, which confers the ability to bind heme, and a C-terminal sortase processing signal which targets the protein to the cell wall. IsdB is believed to make a direct contact with methemoglobin facilitating transfer of heme to IsdB. The heme is then transferred to other cell wall-bound NEAT domain proteins such as IsdA and IsdC.
Statistics
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PSSM-Id: 213844
Aligned: 4 rows
Threshold Bit Score: 984.428
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_001041585   1 MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAQAAaEETGGTNTEAQPKTEAVASPTTTS-EKAPETKPVA--- 76  Staphylococcus ...
WP_001041583   1 MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAQAAaEETGGTNTEAQPKTEAVASPTTTS-EKAPETKPVA--- 76  Staphylococcus ...
WP_001041593   1 MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAQAA-EETGGTNTEAQPKTEAVASPSTTT-EKAPEAKSVA--- 75  Staphylococcus ...
WP_001041573   1 MNKQQKEFKSFYSIRKSSLGVASVAISTLLLLMSNGEAKAA-EETGVTNTEAQPKTEAVASPTTTTtEKAPEAKPVAkpv 79  Staphylococcus ...
WP_001041585  77 -NAVSVSNKEVEAPTSETKEAKEVK---EVKAPKETKEVKPAAKATNNTYPILNQELREAIKNPAIKDKDHSAPNSRPID 152 Staphylococcus ...
WP_001041583  77 -NAVSVSNKEVEAPTSETKEAKEVK---EVKAPKETKAVKPAAKATNNTYPILNQELREAIKNPAIKDKDHSAPNSRPID 152 Staphylococcus ...
WP_001041593  76 -NAVSVSNKEVEAPTSETKEVK------------------PAAKSDNNTYPILNQELREAIKNPAIKDKDHSAPNSRPID 136 Staphylococcus ...
WP_001041573  80 aNAVSVSNKEVVAPTTETKEAKEVKavkEVKAPKEAKEEKPAAKADNNTYPILNQELREAIKNPAIKDKDHSAPNSRPID 159 Staphylococcus ...
WP_001041585 153 FEMKKKDGTQQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAYIRFSVSNGTK 232 Staphylococcus ...
WP_001041583 153 FEMKKENGEQQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAYIRFSVSNGTK 232 Staphylococcus ...
WP_001041593 137 FEMKKENGEQQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAYIRFSVSNGTK 216 Staphylococcus ...
WP_001041573 160 FEMKKKDGTQQFYHYASSVKPARVIFTDSKPEIELGLQSGQFWRKFEVYEGDKKLPIKLVSYDTVKDYAYIRFSVSNGTK 239 Staphylococcus ...
WP_001041585 233 AVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEKLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKK 312 Staphylococcus ...
WP_001041583 233 AVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEKLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKK 312 Staphylococcus ...
WP_001041593 217 AVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEKLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKK 296 Staphylococcus ...
WP_001041573 240 AVKIVSSTHFNNKEEKYDYTLMEFAQPIYNSADKFKTEEDYKAEKLLAPYKKAKTLERQVYELNKIQDKLPEKLKAEYKK 319 Staphylococcus ...
WP_001041585 313 KLEDTKKALDEQVKSAITEFQKVQPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYW 392 Staphylococcus ...
WP_001041583 313 KLEDTKKALDEQVKSAITEFQNVQPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYW 392 Staphylococcus ...
WP_001041593 297 KLEETKKALDEQVKSAITEFQNVQPTNEKMTDLQDTKYVVYESVENNESMMDTFVKHPIKTGMLNGKKYMVMETTNDDYW 376 Staphylococcus ...
WP_001041573 320 KLEETKKALDEQVKSAITEFQNVQPTNEKMTDLQDTKYVVYESVENNESMMDAFVKHPIKTGMLNGKKYMVMETTNDDYW 399 Staphylococcus ...
WP_001041585 393 KDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDKEAFTKANTDKSNKKEQQDNSA 472 Staphylococcus ...
WP_001041583 393 KDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDKEAFTKANTDKSNKKEQQDNSA 472 Staphylococcus ...
WP_001041593 377 KDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDKEAFTKANADKTNKKEQQDNSA 456 Staphylococcus ...
WP_001041573 400 KDFMVEGQRVRTISKDAKNNTRTIIFPYVEGKTLYDAIVKVHVKTIDYDGQYHVRIVDKEAFTKANADKTNKKEQQDNSA 479 Staphylococcus ...
WP_001041585 473 KKEATPATPSKPTPSPVEKESQKQDSQKDDNKQLPSVEKENDASSESGKDKTPATKPTKGEVESSSTTPTKVVSTTQNVA 552 Staphylococcus ...
WP_001041583 473 KKEATPATPSKPTPSPVEKESQKQDSQKDDNKQLPSVEKENDASSESGKDKTPATKPTKGEVESSSTTPTKVVSTTQNVA 552 Staphylococcus ...
WP_001041593 457 KKETTPATPSKPTTPPVEKESQKQDSQKDDNKQSPSVEKENDASSESGKDKTPATKPAKGEVESSSTTPTKVVSTTQNAA 536 Staphylococcus ...
WP_001041573 480 KKETTPAMPSKPTTPPVEKESQKQDSQKDDNKQSPSVEKENDASSESGKDKMPVTKPAKAEVESSSTTPTKVVSTTQNVA 559 Staphylococcus ...
WP_001041585 553 KPTTASSKTTKDVVQTSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLPLMALLALS 632 Staphylococcus ...
WP_001041583 553 KPTTASSKTTKDVVQTSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLPLMALLALS 632 Staphylococcus ...
WP_001041593 537 KPTTASSETTKDVVQTSAGSSEAKDSAPLQKANIKNTNDGHTQSENNKNTQENKAKSLPQTGEESNKDMTLPLMSLLALS 616 Staphylococcus ...
WP_001041573 560 KPTTASSETTKDVVQTSAGSSEAKDSAPLQKANIKNTNDGHTQSQNNKNTQENKAKSLPQTGEESNKDMTLPLMALIALS 639 Staphylococcus ...
WP_001041585 633 SIVAFVLPRKRKN 645 Staphylococcus aureus
WP_001041583 633 SIVAFVLPRKRKN 645 Staphylococcus aureus
WP_001041593 617 SIIAFVLPRKRKN 629 Staphylococcus aureus
WP_001041573 640 SIVAFVLPRKRKN 652 Staphylococcus aureus
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