Conserved Protein Domain Family
TIGR03643

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TIGR03643: TIGR03643 
TIGR03643 family protein
This model describes an uncharacterized bacterial protein family. Members average about 90 amino acids in length with several well-conserved uncommon amino acids (Trp, Met). The majority of species are marine bacteria. Few species have more than one copy, but Vibrio cholerae El Tor N16961 has three identical copies. [Hypothetical proteins, Conserved]
Statistics
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PSSM-Id: 132682
View PSSM: TIGR03643
Aligned: 20 rows
Threshold Bit Score: 97.061
Threshold Setting Gi: 499601605
Created: 9-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_007333549  44 EIDRVIMMAWEDRTSFDAIQTQFSLSHGDVIRLMRQEMKPRSFRMWRKRTAGRATKHEATF---SSQhgenrcrRFRAKS 120 Rhodopirellula ...
WP_004929594  25 EISRIIEMAWEDRTPFEAIEREFGLNESAVIRLMRQHMKSSSFKLWRERVTGRKTKHLQLR---SPD-------VIRGYC 94  Acinetobacter
WP_011613773  10 NIDRIVEMAWEDRTPFEAIKTQFGLEEKQVIVLMRRSMSISSFKMWRKRVTGRKTKHTHKR---AFE-------LGRFKS 79  Trichodesmium e...
WP_010994667  10 TIDRIIEMAWEDRTPFEAIKAQFGLLEKQVIALMKREMKESSFRMWRERVNKRQTKHLGKR---DFL-------AGRFKS 79  Nostoc sp. PCC ...
WP_011574914  12 EISRIIEMAWEDRTPFEAIHREYGFSESQTIKLMRANLHHRAFKNWRARVSGRKTKHQKIR---NPL-------VTRGYC 81  Pseudoalteromon...
WP_011329055   6 QQSRIIEMAWEDRTPFEAIEQLYGLNYSQLVVFMRQNIASGSFKVWRKRHAGRKTKHLKLR---DPA-------IMRSHC 75  Pseudoalteromon...
WP_011584450  35 aIDRIIEMAWEDRTTFDAIQFQFGLNEAAVKTLMKKQLKLSSYRLWRKRVNNCNMKHAAKR---ING-------IDRFKS 104 Cytophaga hutch...
WP_011294813  18 EVDRIIEMAWEDRTPFDAIDFQFNLKEKEVINLMRSNLKTSSFKMWRKRVTGRKLKHG--F---PDK-------RTRFKS 85  Prochlorococcus...
WP_013061313  13 DVSHVIGMAWKDDVPFEAIEARYGLDEEAVIALMRDRLKRSSWKLWRERVSGRPSKHAARQsltDSV-------SKRPPG 85  Salinibacter ruber
AAW49970      48 TTSEVIEMAWCDKTSFDAIKEITGLSEPQVIKIMRNNLKPSSFKLWRKRVTGRVAKHQKRlnhinadslvypydvpdya- 126 synthetic const...
WP_007333549 121 QR 122 Rhodopirellula baltica
WP_004929594  95 TR 96  Acinetobacter
WP_011613773  80 KN 81  Trichodesmium erythraeum
WP_010994667  80 DN 81  Nostoc sp. PCC 7120
WP_011574914  82 MS 83  Pseudoalteromonas atlantica
WP_011329055  76 KT 77  Pseudoalteromonas haloplanktis
WP_011584450 105 Tl 106 Cytophaga hutchinsonii
WP_011294813  86 AN 87  Prochlorococcus marinus
WP_013061313  86 AR 87  Salinibacter ruber
AAW49970         --     synthetic construct
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