Conserved Protein Domain Family
uS11_bact
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TIGR03632: uS11_bact 
ribosomal protein uS11, bacterial form
This model describes the bacterial 30S ribosomal protein S11. Cutoffs are set such that the model excludes archaeal and eukaryotic ribosomal proteins, but many chloroplast and mitochondrial equivalents of S11 are detected. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Links
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Statistics
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PSSM-Id: 274689
Aligned: 25 rows
Threshold Bit Score: 148.92
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_011450437  13 GRVHICATYNNVIVTIADQQGHVLVTTSAGACNFKGSKKSTPYAAQETVARAVKAVIErN-GMKTVSVCISGPGAGREAA 91  Anaplasma phago...
WP_015919511  21 GVVHIKSTFNNTIITLTDKDGNTLTWASGGTVGFEGTRKGTPYAAQLAADKVAREALR-M-GIKRVDVLVKGPGPGREPA 98  Thermotoga neap...
WP_010874547  12 GIIHVSCSPNNTIVSASDPGGNVLCWASSGTMGFKGSRKKTPYSAGIAADKVAKTVKE-M-GMATVKLFVKGTGRGKDTA 89  Mycoplasma pneu...
WP_005903915  19 GVAHIHSTFNNTIVAITDVDGKVVSWKSGGTSGFKGTKKGTPFAAQIAAEQAAQIAME-N-GMRKVEVKVKGPGSGREAC 96  Fusobacterium
WP_011188391  16 GIVYIYSTFNNTIVTISDKQGNVVSWCSAGVLGFKGSRKSTPFAAQNALADAAKKAAD-C-GMRKVEVKVKGPGPGREAA 93  Desulfotalea ps...
WP_029782191  22 GKVYITASFNNTIVTITDMAGNTISWSTSGAMGFRGSKKSTPYAAQIAAGNAAEKAMD-SaGLQEVDVMVSGPGIGRESA 100 Leptospira inte...
WP_011006086  22 GVVHVKATFNNTIVSITDPAGNTISWASAGKVGYSGSRKSSAFAATMAAQDAAKNAMN-S-GLKEVEVCLKGTGAGRESA 99  Chlamydophila c...
WP_004026006  12 GIAYIHATKNNTIITLADEQGSVLSWASSGSIGYKGTKKKTPYSAGIAAEAAAKAVID-M-GLKSVEVHVNGTGASRDTA 89  Ureaplasma
WP_011565089  25 AVVHIKSSFNNTIISVTDQEGNVIAWESAGSMGFKGSRKSTPYAAQMTAESAANKAME-H-GVKRVDIQVKGHGSGRDMA 102 Rubrobacter xyl...
WP_011113888  12 GIAHIHATSNNSIITITDINGNAITWSSSGAIGYKGAKKKTPYSAGVAAEKAAKEAMA-M-GLSTIKIYVNGVGRGKETA 89  Mycoplasma gall...

WP_011450437  92 IRAVQACNLNVTSIKDVTKLPHNGCKLPKR 121 Anaplasma phagocytophilum
WP_015919511  99 IRTLQGAGLEINQIKDVTPIPFNGCRPKKR 128 Thermotoga neapolitana
WP_010874547  90 IRSFANAGLSITEINEKTPIPHNGCKPPKR 119 Mycoplasma pneumoniae
WP_005903915  97 IRSLQAAGLEVTKITDVTPVPHNGCRPPKR 126 Fusobacterium
WP_011188391  94 LRALVSTGFEVSRIYDVTPVPHNGCKPPKR 123 Desulfotalea psychrophila
WP_029782191 101 IRSLVARGLNIKMIKDVTPLPHNGCRPRKR 130 Leptospira interrogans
WP_011006086 100 VRALIASGLVVSVIRDETPVPHNGCRPRKR 129 Chlamydophila caviae
WP_004026006  90 IRSLQAAGLEVTKIKDVTPIPHNGCRPPKK 119 Ureaplasma
WP_011565089 103 ARTFQAMGIEVLSIKDVTGQPHNGCRPPKR 132 Rubrobacter xylanophilus
WP_011113888  90 IRSLAACGLTITEIHDVTPIPHNGCRPPKK 119 Mycoplasma gallisepticum
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