3J20


Conserved Protein Domain Family
uS13_arch

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TIGR03629: uS13_arch 
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ribosomal protein uS13, archaeal form
This model describes exclusively the archaeal ribosomal protein S13P. It excludes the homologous eukaryotic 40S ribosomal protein S18 and bacterial 30S ribosomal protein S13. [Protein synthesis, Ribosomal proteins: synthesis and modification]
Statistics
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PSSM-Id: 213839
Aligned: 14 rows
Threshold Bit Score: 206.742
Created: 9-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3J20_O         3 NFRHIVRVAGVDLDGNKQLRWALTAIKGIGINFATMVCRVAGLDPFMKAGYLTDEQVKKIE---EILADpVAHGIPRWAV 79  Pyrococcus furi...
WP_011021136  39 ELRHLVRIMNTDLQGAKPVQYALTGLPGVGRRTAKLIAKGAGVDPSAILGYLPEEEVAKLD---TAIGK-FEDIVPSWML 114 Methanosarcina ...
WP_010875675   4 EFKHMVRIARKDIDGNKTMENALTSIKGVGKALSRAIIMSAGYDLNQRIGYLSDEEIERLE---EAIKNpAKYNIPSWMI 80  Methanothermoba...
WP_011009127   4 EIRAIVRIGDTDLDGNKQVAYALAKIRGIGIASAYAICWKLGIDPHAILGALPEDQINKLD---WAVRN-LHELAPAWFL 79  Pyrobaculum aer...
WP_011019839   5 EVKPIVRIADVDLDGHKKVPYALTGIKGIGIRMAYAICRELGLDEEKKLGELSDEEIERIEeeiKKLSE-GESNIPSWMY 83  Methanopyrus ka...
WP_011153449   9 VTKDIVHIADVDLDGHKPIYVELRKVVGVNWMFAHAVCAALGIDKWRKIGSLSDEELEKLE---DALRNpWKYGIPSWLY 85  Nanoarchaeum eq...
WP_011449847   7 EINYFVRVHNTDLDGTKPVLISLTGIKGVGRHTAKFIAETAGVEKNVLMGKLDEASVDRIR---EVVSN-YADRIPVWMS 82  Methanospirillu...
WP_010902812  12 DIQYFVRIGQTDLDGTKTVERALAELGGVGRRVARIVADEAGVDRTATMGGLEDDAIESVT---DAVDS-FTEHAPAWLA 87  Halobacterium s...
WP_010879774   2 TFKHIVRIADTDLDGNKSLMFALTGIKGIGLRAARCIVNELGVDGRAKLGELDDETIEKVK---KFVEE-EIESLPSWLL 77  Archaeoglobus f...
WP_011323130  14 DLQYFVRIGQTDLDGTKSVERALTDMNGIGRRVARIIAEKAEVDRRDVLGALDEEKIDDVV---AAVEE-YGDEVPEWLT 89  Natronomonas ph...
3J20_O        80 NRPKDYETGRDLHLITAKLDMAIREDIMRLRRIRAYRGIRHELGLPVRGQRTRSNFRRGQTVGVSRKK 147 Pyrococcus furiosus DSM 3638
WP_011021136 115 NRQKDLATGQDKHLLGTDILLTFREDINNLKKVRAYRGLRHERGLKVRGQRTKSTGRRGSTVGVSRKK 182 Methanosarcina acetivorans
WP_010875675  81 NRRNDYETGEDKHLIESDLEMCLREDLNRMRKTRSYKGRRHELGLPVRGQRTKSTFRKGSSVGVRRKK 148 Methanothermobacter thermau...
WP_011009127  80 NRRKDPETGRDLHLIGSELVLAAKRDVDLMKKLKSWKGVRHSLGLKVRGQRTVTTGRFGATAGVTKKK 147 Pyrobaculum aerophilum
WP_011019839  84 NRQKDYETGEDMHLVGAELEMTVKQDIDRLKKIRAYRGIRHELGLPVRGQRTKSSFRRGRTVGVKKKQ 151 Methanopyrus kandleri
WP_011153449  86 NRRRDPETGKDLHLVGNDYKITMEFDIKREMQINSWRGYRHREGLPVRGQRTRSHHRKGRTVGVIKKK 153 Nanoarchaeum equitans
WP_011449847  83 NRPKDVYTGVKRHLLGADVTMTVDDDINLLKKIRAYRGIRHETGQKVRGQRTKSTGRTGLIVGVKRKK 150 Methanospirillum hungatei
WP_010902812  88 NRQNDFYTGENQHITGTDVELTRDQDINRMRMIRSYKGIRHERGQKVRGQRTKSTGRTEGTIGVNVEA 155 Halobacterium salinarum
WP_010879774  78 NRRKDPYSGQDLHLLSKDVDFARMLDIERLIKMKAYRGVRHARGKKVRGQRTRSTGRKGRTVGVVRRK 145 Archaeoglobus fulgidus
WP_011323130  90 NHQKDFFTGETTHEIGNDLQMSRRQDINRMKKIDAYRGVRHKRGQKVRGQRTKSTGRTEGTIGVNVEA 157 Natronomonas pharaonis
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